RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 TRPC5Q9UL62 973 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC10-209ENST00000481460 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC10-209ENST00000481460 ARHGAP23Q9P227 1491 aa8.91□□□□□ -0.98
TRAPPC10-209ENST00000481460 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
TRAPPC10-209ENST00000481460 CAMTA1Q9Y6Y1 1673 aa8.91□□□□□ -0.98
TRAPPC10-209ENST00000481460 PZPP20742 1482 aa8.9□□□□□ -0.98
TRAPPC10-209ENST00000481460 ATRNO75882 1429 aa8.9□□□□□ -0.98
TRAPPC10-209ENST00000481460 MSH6P52701 1360 aa8.9□□□□□ -0.98
TRAPPC10-209ENST00000481460 KCNA6P17658 529 aa8.9□□□□□ -0.98
TRAPPC10-209ENST00000481460 ADGBQ8N7X0 1667 aa8.9□□□□□ -0.98
TRAPPC10-209ENST00000481460 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
TRAPPC10-209ENST00000481460 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC10-209ENST00000481460 SF3B2Q13435 895 aaKnown RBP8.89□□□□□ -0.99
TRAPPC10-209ENST00000481460 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
TRAPPC10-209ENST00000481460 KDM5AP29375 1690 aaKnown RBP8.88□□□□□ -0.99
TRAPPC10-209ENST00000481460 R3HDM1Q15032 1099 aaKnown RBP8.88□□□□□ -0.99
TRAPPC10-209ENST00000481460 PROSER2Q86WR7 435 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC10-209ENST00000481460 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC10-209ENST00000481460 GGT6Q6P531 493 aa8.87□□□□□ -0.99
TRAPPC10-209ENST00000481460 P3H3Q8IVL6 736 aa8.87□□□□□ -0.99
TRAPPC10-209ENST00000481460 RALGAPBQ86X10 1494 aa8.87□□□□□ -0.99
TRAPPC10-209ENST00000481460 SAMD9Q5K651 1589 aa8.86□□□□□ -0.99
TRAPPC10-209ENST00000481460 NKTRP30414 1462 aaKnown RBP8.86□□□□□ -0.99
TRAPPC10-209ENST00000481460 COL13A1Q5TAT6 717 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC10-209ENST00000481460 USP21Q9UK80 565 aa8.86□□□□□ -0.99
TRAPPC10-209ENST00000481460 BRWD3Q6RI45 1802 aa8.86□□□□□ -0.99
TRAPPC10-209ENST00000481460 ARHGAP5Q13017 1502 aa8.85□□□□□ -0.99
TRAPPC10-209ENST00000481460 LTKP29376 864 aa8.85□□□□□ -0.99
TRAPPC10-209ENST00000481460 CDC42BPBQ9Y5S2 1711 aa8.85□□□□□ -0.99
TRAPPC10-209ENST00000481460 SLIT1O75093 1534 aa8.84□□□□□ -0.99
TRAPPC10-209ENST00000481460 A2MP01023 1474 aa8.83□□□□□ -1
TRAPPC10-209ENST00000481460 SAMD9LQ8IVG5 1584 aa8.83□□□□□ -1
TRAPPC10-209ENST00000481460 NCOA3Q9Y6Q9 1424 aa8.82□□□□□ -1
TRAPPC10-209ENST00000481460 HSPA6P17066 643 aa8.82□□□□□ -1
TRAPPC10-209ENST00000481460 BAG6P46379 1132 aa8.82□□□□□ -1
TRAPPC10-209ENST00000481460 RBM42Q9BTD8 480 aaKnown RBP8.82□□□□□ -1
TRAPPC10-209ENST00000481460 MROH1Q8NDA8 1641 aa8.82□□□□□ -1
TRAPPC10-209ENST00000481460 UBR1Q8IWV7 1749 aa8.82□□□□□ -1
TRAPPC10-209ENST00000481460 NCOA2Q15596 1464 aa8.82□□□□□ -1
TRAPPC10-209ENST00000481460 LRRC59Q96AG4 307 aaKnown RBP8.81□□□□□ -1
TRAPPC10-209ENST00000481460 PNPLA6Q8IY17 1366 aa8.81□□□□□ -1
TRAPPC10-209ENST00000481460 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
TRAPPC10-209ENST00000481460 GJD4Q96KN9 370 aaPredicted RBP8.8□□□□□ -1
TRAPPC10-209ENST00000481460 MAST1Q9Y2H9 1570 aa8.8□□□□□ -1
TRAPPC10-209ENST00000481460 TET3O43151 1660 aa8.79□□□□□ -1
TRAPPC10-209ENST00000481460 BRINP3Q76B58 766 aa8.79□□□□□ -1
TRAPPC10-209ENST00000481460 TNS4Q8IZW8 715 aa8.79□□□□□ -1
TRAPPC10-209ENST00000481460 DISP2A7MBM2 1401 aa8.78□□□□□ -1
TRAPPC10-209ENST00000481460 AKT1S1Q96B36 256 aa8.77□□□□□ -1.01
TRAPPC10-209ENST00000481460 SPON1Q9HCB6 807 aa8.77□□□□□ -1.01
TRAPPC10-209ENST00000481460 PTCH1Q13635 1447 aa8.77□□□□□ -1.01
TRAPPC10-209ENST00000481460 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
TRAPPC10-209ENST00000481460 CAMSAP2Q08AD1 1489 aa8.77□□□□□ -1.01
TRAPPC10-209ENST00000481460 ARHGAP35Q9NRY4 1499 aa8.77□□□□□ -1.01
TRAPPC10-209ENST00000481460 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
TRAPPC10-209ENST00000481460 CADPS2Q86UW7 1296 aa8.76□□□□□ -1.01
TRAPPC10-209ENST00000481460 PPP1R1BQ9UD71 204 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC10-209ENST00000481460 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC10-209ENST00000481460 INO80Q9ULG1 1556 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC10-209ENST00000481460 KCNQ2O43526 872 aa8.75□□□□□ -1.01
TRAPPC10-209ENST00000481460 EN1Q05925 392 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC10-209ENST00000481460 DNAJC5GQ8N7S2 189 aa8.75□□□□□ -1.01
TRAPPC10-209ENST00000481460 CHD2O14647 1828 aaKnown RBP8.75□□□□□ -1.01
TRAPPC10-209ENST00000481460 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.74□□□□□ -1.01
TRAPPC10-209ENST00000481460 GLI3P10071 1580 aa8.74□□□□□ -1.01
TRAPPC10-209ENST00000481460 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
TRAPPC10-209ENST00000481460 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
TRAPPC10-209ENST00000481460 PREX2Q70Z35 1606 aa8.73□□□□□ -1.01
TRAPPC10-209ENST00000481460 ONECUT3O60422 494 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC10-209ENST00000481460 C19orf44Q9H6X5 657 aa8.73□□□□□ -1.01
TRAPPC10-209ENST00000481460 EID1Q9Y6B2 187 aa8.73□□□□□ -1.01
TRAPPC10-209ENST00000481460 RGPD1P0DJD0 1748 aa8.73□□□□□ -1.01
TRAPPC10-209ENST00000481460 ASXL1Q8IXJ9 1541 aa8.73□□□□□ -1.01
TRAPPC10-209ENST00000481460 GPATCH8Q9UKJ3 1502 aaKnown RBP8.73□□□□□ -1.01
TRAPPC10-209ENST00000481460 PCNTO95613 3336 aa8.72□□□□□ -1.01
TRAPPC10-209ENST00000481460 REM2Q8IYK8 340 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC10-209ENST00000481460 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
TRAPPC10-209ENST00000481460 MARF1Q9Y4F3 1742 aaKnown RBP8.7□□□□□ -1.02
TRAPPC10-209ENST00000481460 WASHC2CQ9Y4E1 1318 aa8.7□□□□□ -1.02
TRAPPC10-209ENST00000481460 PRXQ9BXM0 1461 aa8.7□□□□□ -1.02
TRAPPC10-209ENST00000481460 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
TRAPPC10-209ENST00000481460 SLC26A8Q96RN1 970 aa8.69□□□□□ -1.02
TRAPPC10-209ENST00000481460 CAMKK2Q96RR4 588 aa8.69□□□□□ -1.02
TRAPPC10-209ENST00000481460 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
TRAPPC10-209ENST00000481460 TROQ12816 1431 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC10-209ENST00000481460 ATF3P18847 181 aa8.68□□□□□ -1.02
TRAPPC10-209ENST00000481460 EZH2Q15910 746 aaKnown RBP8.68□□□□□ -1.02
TRAPPC10-209ENST00000481460 KRT27Q7Z3Y8 459 aa8.68□□□□□ -1.02
TRAPPC10-209ENST00000481460 ERVK-7P63135 1459 aa8.68□□□□□ -1.02
TRAPPC10-209ENST00000481460 TNS1Q9HBL0 1735 aaKnown RBP8.68□□□□□ -1.02
TRAPPC10-209ENST00000481460 LAMC1P11047 1609 aa8.67□□□□□ -1.02
TRAPPC10-209ENST00000481460 AATKQ6ZMQ8 1374 aa8.67□□□□□ -1.02
TRAPPC10-209ENST00000481460 DHX29Q7Z478 1369 aaKnown RBP8.67□□□□□ -1.02
TRAPPC10-209ENST00000481460 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
TRAPPC10-209ENST00000481460 PARD3Q8TEW0 1356 aa8.67□□□□□ -1.02
TRAPPC10-209ENST00000481460 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC10-209ENST00000481460 COL22A1Q8NFW1 1626 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC10-209ENST00000481460 STAG3Q9UJ98 1225 aa8.66□□□□□ -1.02
TRAPPC10-209ENST00000481460 RREB1Q92766 1687 aa8.65□□□□□ -1.02
TRAPPC10-209ENST00000481460 DCCP43146 1447 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms