RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 POGZQ7Z3K3 1410 aa18.87■□□□□ 0.61
PHF3-204ENST00000481385 MYOM1P52179 1685 aa18.86■□□□□ 0.61
PHF3-204ENST00000481385 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
PHF3-204ENST00000481385 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
PHF3-204ENST00000481385 MYOM2P54296 1465 aa18.85■□□□□ 0.61
PHF3-204ENST00000481385 BLMP54132 1417 aaPredicted RBP18.85■□□□□ 0.61
PHF3-204ENST00000481385 LMTK2Q8IWU2 1503 aa18.85■□□□□ 0.61
PHF3-204ENST00000481385 KIAA1210Q9ULL0 1709 aa18.84■□□□□ 0.61
PHF3-204ENST00000481385 SYNMO15061 1565 aa18.84■□□□□ 0.61
PHF3-204ENST00000481385 IFT172Q9UG01 1749 aa18.84■□□□□ 0.61
PHF3-204ENST00000481385 KIF1BO60333 1816 aa18.83■□□□□ 0.61
PHF3-204ENST00000481385 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
PHF3-204ENST00000481385 NPATQ14207 1427 aa18.82■□□□□ 0.6
PHF3-204ENST00000481385 GGT6Q6P531 493 aa18.81■□□□□ 0.6
PHF3-204ENST00000481385 PPP2R1AP30153 589 aa18.81■□□□□ 0.6
PHF3-204ENST00000481385 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
PHF3-204ENST00000481385 MLH3Q9UHC1 1453 aa18.81■□□□□ 0.6
PHF3-204ENST00000481385 ERVK-7P63135 1459 aa18.8■□□□□ 0.6
PHF3-204ENST00000481385 NRXN1Q9ULB1 1477 aa18.8■□□□□ 0.6
PHF3-204ENST00000481385 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
PHF3-204ENST00000481385 ADGRB3O60242 1522 aa18.8■□□□□ 0.6
PHF3-204ENST00000481385 NOS1P29475 1434 aa18.8■□□□□ 0.6
PHF3-204ENST00000481385 HECW2Q9P2P5 1572 aa18.79■□□□□ 0.6
PHF3-204ENST00000481385 MSH5O43196 834 aa18.79■□□□□ 0.6
PHF3-204ENST00000481385 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
PHF3-204ENST00000481385 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
PHF3-204ENST00000481385 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
PHF3-204ENST00000481385 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
PHF3-204ENST00000481385 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
PHF3-204ENST00000481385 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
PHF3-204ENST00000481385 RCAN3Q9UKA8 241 aa18.78■□□□□ 0.6
PHF3-204ENST00000481385 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
PHF3-204ENST00000481385 ZMYM4Q5VZL5 1548 aa18.77■□□□□ 0.6
PHF3-204ENST00000481385 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.6
PHF3-204ENST00000481385 INSRP06213 1382 aa18.77■□□□□ 0.59
PHF3-204ENST00000481385 KDM5AP29375 1690 aaKnown RBP18.77■□□□□ 0.59
PHF3-204ENST00000481385 ANP32EQ9BTT0 268 aa18.76■□□□□ 0.59
PHF3-204ENST00000481385 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
PHF3-204ENST00000481385 ABCC3O15438 1527 aa18.74■□□□□ 0.59
PHF3-204ENST00000481385 EXOC6Q8TAG9 804 aa18.74■□□□□ 0.59
PHF3-204ENST00000481385 CARD14Q9BXL6 1004 aa18.73■□□□□ 0.59
PHF3-204ENST00000481385 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
PHF3-204ENST00000481385 SIGLEC1Q9BZZ2 1709 aa18.72■□□□□ 0.59
PHF3-204ENST00000481385 PIK3C2GO75747 1445 aa18.72■□□□□ 0.59
PHF3-204ENST00000481385 PLEKHH1Q9ULM0 1364 aa18.71■□□□□ 0.59
PHF3-204ENST00000481385 PPLO60437 1756 aa18.71■□□□□ 0.59
PHF3-204ENST00000481385 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
PHF3-204ENST00000481385 TRAK1Q9UPV9 953 aa18.7■□□□□ 0.58
PHF3-204ENST00000481385 MYT1Q01538 1121 aa18.7■□□□□ 0.58
PHF3-204ENST00000481385 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
PHF3-204ENST00000481385 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
PHF3-204ENST00000481385 PLIN1O60240 522 aa18.69■□□□□ 0.58
PHF3-204ENST00000481385 ADGRB1O14514 1584 aa18.69■□□□□ 0.58
PHF3-204ENST00000481385 DIP2CQ9Y2E4 1556 aa18.69■□□□□ 0.58
PHF3-204ENST00000481385 NEO1Q92859 1461 aa18.69■□□□□ 0.58
PHF3-204ENST00000481385 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
PHF3-204ENST00000481385 CAMSAP1Q5T5Y3 1602 aa18.68■□□□□ 0.58
PHF3-204ENST00000481385 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
PHF3-204ENST00000481385 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
PHF3-204ENST00000481385 C14orf93Q9H972 538 aaKnown RBP18.67■□□□□ 0.58
PHF3-204ENST00000481385 CENPJQ9HC77 1338 aaPredicted RBP18.67■□□□□ 0.58
PHF3-204ENST00000481385 SBNO2Q9Y2G9 1366 aa18.66■□□□□ 0.58
PHF3-204ENST00000481385 YEATS2Q9ULM3 1422 aa18.65■□□□□ 0.58
PHF3-204ENST00000481385 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.58
PHF3-204ENST00000481385 ZNF521Q96K83 1311 aa18.64■□□□□ 0.58
PHF3-204ENST00000481385 RICTORQ6R327 1708 aa18.64■□□□□ 0.57
PHF3-204ENST00000481385 ZC3H13Q5T200 1668 aaKnown RBP18.63■□□□□ 0.57
PHF3-204ENST00000481385 QRICH2Q9H0J4 1663 aa18.63■□□□□ 0.57
PHF3-204ENST00000481385 PIK3C2BO00750 1634 aa18.63■□□□□ 0.57
PHF3-204ENST00000481385 DUSP27Q5VZP5 1158 aa18.62■□□□□ 0.57
PHF3-204ENST00000481385 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
PHF3-204ENST00000481385 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
PHF3-204ENST00000481385 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
PHF3-204ENST00000481385 NEXMIFQ5QGS0 1516 aa18.6■□□□□ 0.57
PHF3-204ENST00000481385 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
PHF3-204ENST00000481385 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
PHF3-204ENST00000481385 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
PHF3-204ENST00000481385 GLI2P10070 1586 aa18.58■□□□□ 0.57
PHF3-204ENST00000481385 IDI1Q13907 227 aa18.58■□□□□ 0.56
PHF3-204ENST00000481385 CRBNQ96SW2 442 aa18.58■□□□□ 0.56
PHF3-204ENST00000481385 SPINK5Q9NQ38 1064 aaPredicted RBP18.58■□□□□ 0.56
PHF3-204ENST00000481385 CYB5RLQ6IPT4 315 aa18.58■□□□□ 0.56
PHF3-204ENST00000481385 APAF1O14727 1248 aa18.57■□□□□ 0.56
PHF3-204ENST00000481385 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
PHF3-204ENST00000481385 ARHGAP31Q2M1Z3 1444 aa18.55■□□□□ 0.56
PHF3-204ENST00000481385 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
PHF3-204ENST00000481385 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
PHF3-204ENST00000481385 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
PHF3-204ENST00000481385 ARHGEF28Q8N1W1 1705 aaKnown RBP18.54■□□□□ 0.56
PHF3-204ENST00000481385 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
PHF3-204ENST00000481385 VGFO15240 615 aaPredicted RBP18.53■□□□□ 0.56
PHF3-204ENST00000481385 SKAP1Q86WV1 359 aa18.52■□□□□ 0.56
PHF3-204ENST00000481385 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.556e-6■■■□□ 18.1
PHF3-204ENST00000481385 TRMT2AQ8IZ69 625 aaKnown RBP18.52■□□□□ 0.55
PHF3-204ENST00000481385 MYO5BQ9ULV0 1848 aa18.51■□□□□ 0.55
PHF3-204ENST00000481385 POLR3AO14802 1390 aaPredicted RBP18.51■□□□□ 0.55
PHF3-204ENST00000481385 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
PHF3-204ENST00000481385 FBXO31Q5XUX0 539 aaPredicted RBP18.5■□□□□ 0.55
PHF3-204ENST00000481385 SHPRHQ149N8 1683 aa18.5■□□□□ 0.55
PHF3-204ENST00000481385 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms