RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 FECHP22830 423 aa8.77□□□□□ -1.01
CBX3-207ENST00000481300 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
CBX3-207ENST00000481300 PXYLP1Q8TE99 480 aa8.76□□□□□ -1.01
CBX3-207ENST00000481300 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
CBX3-207ENST00000481300 GNPATO15228 680 aa8.74□□□□□ -1.01
CBX3-207ENST00000481300 COPS2P61201 443 aa8.74□□□□□ -1.01
CBX3-207ENST00000481300 METTL3Q86U44 580 aaKnown RBP8.74□□□□□ -1.01
CBX3-207ENST00000481300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.73□□□□□ -1.01
CBX3-207ENST00000481300 OATP04181 439 aa8.73□□□□□ -1.01
CBX3-207ENST00000481300 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
CBX3-207ENST00000481300 SLC10A3P09131 477 aa8.72□□□□□ -1.01
CBX3-207ENST00000481300 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
CBX3-207ENST00000481300 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
CBX3-207ENST00000481300 PRR14Q9BWN1 585 aa8.71□□□□□ -1.02
CBX3-207ENST00000481300 CFHP08603 1231 aa8.7□□□□□ -1.02
CBX3-207ENST00000481300 BLOC1S3Q6QNY0 202 aa8.7□□□□□ -1.02
CBX3-207ENST00000481300 PCDHB3Q9Y5E6 796 aa8.7□□□□□ -1.02
CBX3-207ENST00000481300 ZPR1O75312 459 aa8.69□□□□□ -1.02
CBX3-207ENST00000481300 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
CBX3-207ENST00000481300 ACTN4O43707 911 aaKnown RBP8.68□□□□□ -1.02
CBX3-207ENST00000481300 KMT5BQ4FZB7 885 aa8.67□□□□□ -1.02
CBX3-207ENST00000481300 NLRP7Q8WX94 980 aa8.67□□□□□ -1.02
CBX3-207ENST00000481300 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
CBX3-207ENST00000481300 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.67□□□□□ -1.02
CBX3-207ENST00000481300 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
CBX3-207ENST00000481300 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
CBX3-207ENST00000481300 TLL1O43897 1013 aa8.65□□□□□ -1.02
CBX3-207ENST00000481300 PRKD2Q9BZL6 878 aa8.65□□□□□ -1.02
CBX3-207ENST00000481300 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
CBX3-207ENST00000481300 PRKCSHP14314 528 aaPredicted RBP8.62□□□□□ -1.03
CBX3-207ENST00000481300 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
CBX3-207ENST00000481300 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
CBX3-207ENST00000481300 GGCXP38435 758 aa8.6□□□□□ -1.03
CBX3-207ENST00000481300 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
CBX3-207ENST00000481300 V9GY48 417 aaPredicted RBP8.6□□□□□ -1.03
CBX3-207ENST00000481300 RNF223E7ERA6 249 aa8.59□□□□□ -1.03
CBX3-207ENST00000481300 MAP2K5Q13163 448 aa8.59□□□□□ -1.03
CBX3-207ENST00000481300 RSPH4AQ5TD94 716 aa8.59□□□□□ -1.03
CBX3-207ENST00000481300 RDH13Q8NBN7 331 aa8.59□□□□□ -1.03
CBX3-207ENST00000481300 NR1I2O75469 434 aa8.58□□□□□ -1.04
CBX3-207ENST00000481300 SCUBE3Q8IX30 993 aa8.58□□□□□ -1.04
CBX3-207ENST00000481300 S1PR4O95977 384 aa8.57□□□□□ -1.04
CBX3-207ENST00000481300 ADH1BP00325 375 aa8.57□□□□□ -1.04
CBX3-207ENST00000481300 EMID1Q96A84 441 aaPredicted RBP8.57□□□□□ -1.04
CBX3-207ENST00000481300 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
CBX3-207ENST00000481300 FUT2Q10981 343 aa8.56□□□□□ -1.04
CBX3-207ENST00000481300 IRF6O14896 467 aa8.55□□□□□ -1.04
CBX3-207ENST00000481300 GFRA3O60609 400 aa8.55□□□□□ -1.04
CBX3-207ENST00000481300 GCGRP47871 477 aa8.55□□□□□ -1.04
CBX3-207ENST00000481300 MORN1Q5T089 497 aa8.55□□□□□ -1.04
CBX3-207ENST00000481300 LMOD2Q6P5Q4 547 aa8.55□□□□□ -1.04
CBX3-207ENST00000481300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
CBX3-207ENST00000481300 SULF1Q8IWU6 871 aa8.55□□□□□ -1.04
CBX3-207ENST00000481300 Q6ZNB5 142 aa8.54□□□□□ -1.04
CBX3-207ENST00000481300 LCE2BO14633 110 aa8.53□□□□□ -1.04
CBX3-207ENST00000481300 LAPTM4AQ15012 233 aa8.53□□□□□ -1.04
CBX3-207ENST00000481300 ANKLE1Q8NAG6 615 aa8.53□□□□□ -1.04
CBX3-207ENST00000481300 MINK1Q8N4C8 1332 aaPredicted RBP8.53□□□□□ -1.04
CBX3-207ENST00000481300 ATP6V1AP38606 617 aa8.52□□□□□ -1.05
CBX3-207ENST00000481300 CCDC102AQ96A19 550 aa8.52□□□□□ -1.05
CBX3-207ENST00000481300 SPSB2Q99619 263 aa8.52□□□□□ -1.05
CBX3-207ENST00000481300 SLC6A16Q9GZN6 736 aa8.52□□□□□ -1.05
CBX3-207ENST00000481300 SLC19A1P41440 591 aa8.51□□□□□ -1.05
CBX3-207ENST00000481300 THAP11Q96EK4 314 aa8.51□□□□□ -1.05
CBX3-207ENST00000481300 SLC27A5Q9Y2P5 690 aa8.51□□□□□ -1.05
CBX3-207ENST00000481300 NRG2O14511 850 aaPredicted RBP8.5□□□□□ -1.05
CBX3-207ENST00000481300 CD46P15529 392 aa8.5□□□□□ -1.05
CBX3-207ENST00000481300 MDM2Q00987 491 aaPredicted RBP8.5□□□□□ -1.05
CBX3-207ENST00000481300 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
CBX3-207ENST00000481300 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
CBX3-207ENST00000481300 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
CBX3-207ENST00000481300 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
CBX3-207ENST00000481300 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
CBX3-207ENST00000481300 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
CBX3-207ENST00000481300 FMNL1O95466 1100 aaPredicted RBP8.46□□□□□ -1.06
CBX3-207ENST00000481300 BRICD5Q6PL45 260 aa8.46□□□□□ -1.06
CBX3-207ENST00000481300 SALL2Q9Y467 1007 aaPredicted RBP8.46□□□□□ -1.06
CBX3-207ENST00000481300 RNF19BQ6ZMZ0 732 aa8.45□□□□□ -1.06
CBX3-207ENST00000481300 ZNF598Q86UK7 904 aaKnown RBP8.45□□□□□ -1.06
CBX3-207ENST00000481300 PRDM9Q9NQV7 894 aa8.45□□□□□ -1.06
CBX3-207ENST00000481300 KDM4AO75164 1064 aa8.44□□□□□ -1.06
CBX3-207ENST00000481300 TRAF7Q6Q0C0 670 aa8.44□□□□□ -1.06
CBX3-207ENST00000481300 GPCPD1Q9NPB8 672 aa8.44□□□□□ -1.06
CBX3-207ENST00000481300 GRIPAP1Q4V328 841 aa8.43□□□□□ -1.06
CBX3-207ENST00000481300 ZNF697Q5TEC3 545 aa8.43□□□□□ -1.06
CBX3-207ENST00000481300 REPIN1Q9BWE0 567 aaKnown RBP8.43□□□□□ -1.06
CBX3-207ENST00000481300 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
CBX3-207ENST00000481300 ZMYND10O75800 440 aa8.42□□□□□ -1.06
CBX3-207ENST00000481300 CLCN1P35523 988 aa8.42□□□□□ -1.06
CBX3-207ENST00000481300 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
CBX3-207ENST00000481300 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
CBX3-207ENST00000481300 HLA-CQ95604 372 aa8.42□□□□□ -1.06
CBX3-207ENST00000481300 FCF1Q9Y324 198 aaKnown RBP8.42□□□□□ -1.06
CBX3-207ENST00000481300 MSS51Q4VC12 460 aa8.41□□□□□ -1.06
CBX3-207ENST00000481300 HOXA2O43364 376 aa8.4□□□□□ -1.06
CBX3-207ENST00000481300 GDF9O60383 454 aa8.4□□□□□ -1.06
CBX3-207ENST00000481300 PRR20EP86478 221 aa8.4□□□□□ -1.06
CBX3-207ENST00000481300 PRR20CP86479 221 aa8.4□□□□□ -1.06
CBX3-207ENST00000481300 PRR20DP86480 221 aa8.4□□□□□ -1.06
CBX3-207ENST00000481300 PRR20BP86481 221 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms