RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 IDI1Q13907 227 aa31.48■■■□□ 2.63
TMED4-205ENST00000481238 KIAA1210Q9ULL0 1709 aa31.47■■■□□ 2.63
TMED4-205ENST00000481238 TRHP20396 242 aaPredicted RBP31.46■■■□□ 2.63
TMED4-205ENST00000481238 PREX1Q8TCU6 1659 aa31.45■■■□□ 2.63
TMED4-205ENST00000481238 MLECQ14165 292 aa31.44■■■□□ 2.62
TMED4-205ENST00000481238 TESK2Q96S53 571 aa31.43■■■□□ 2.62
TMED4-205ENST00000481238 FBXO31Q5XUX0 539 aaPredicted RBP31.42■■■□□ 2.62
TMED4-205ENST00000481238 ERVK-7P63135 1459 aa31.41■■■□□ 2.62
TMED4-205ENST00000481238 SCAF11Q99590 1463 aaKnown RBP31.41■■■□□ 2.62
TMED4-205ENST00000481238 CFAP70Q5T0N1 1121 aa31.41■■■□□ 2.62
TMED4-205ENST00000481238 POLR3GLQ9BT43 218 aa31.4■■■□□ 2.62
TMED4-205ENST00000481238 CLTCQ00610 1675 aaKnown RBP31.39■■■□□ 2.62
TMED4-205ENST00000481238 PPLO60437 1756 aa31.39■■■□□ 2.61
TMED4-205ENST00000481238 IQGAP1P46940 1657 aa31.37■■■□□ 2.61
TMED4-205ENST00000481238 VGFO15240 615 aaPredicted RBP31.35■■■□□ 2.61
TMED4-205ENST00000481238 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
TMED4-205ENST00000481238 PIK3C2GO75747 1445 aa31.34■■■□□ 2.61
TMED4-205ENST00000481238 C14orf93Q9H972 538 aaKnown RBP31.33■■■□□ 2.61
TMED4-205ENST00000481238 TMF1P82094 1093 aa31.33■■■□□ 2.61
TMED4-205ENST00000481238 SPATA31D1Q6ZQQ2 1576 aa31.31■■■□□ 2.6
TMED4-205ENST00000481238 NEXMIFQ5QGS0 1516 aa31.31■■■□□ 2.6
TMED4-205ENST00000481238 EIF3AQ14152 1382 aaKnown RBP31.31■■■□□ 2.6
TMED4-205ENST00000481238 ZMYM3Q14202 1370 aa31.31■■■□□ 2.6
TMED4-205ENST00000481238 PRKRIP1Q9H875 184 aaPredicted RBP31.3■■■□□ 2.6
TMED4-205ENST00000481238 TMEM131LA2VDJ0 1609 aa31.3■■■□□ 2.6
TMED4-205ENST00000481238 ZFYVE9O95405 1425 aa31.29■■■□□ 2.6
TMED4-205ENST00000481238 SETBP1Q9Y6X0 1596 aa31.28■■■□□ 2.6
TMED4-205ENST00000481238 DISP3Q9P2K9 1392 aa31.28■■■□□ 2.6
TMED4-205ENST00000481238 SLC24A1O60721 1099 aa31.24■■■□□ 2.59
TMED4-205ENST00000481238 NUTM2DQ5VT03 806 aaPredicted RBP31.2■■■□□ 2.59
TMED4-205ENST00000481238 STAG3Q9UJ98 1225 aa31.2■■■□□ 2.59
TMED4-205ENST00000481238 CDCA8Q53HL2 280 aa31.2■■■□□ 2.58
TMED4-205ENST00000481238 ADGRB1O14514 1584 aa31.19■■■□□ 2.58
TMED4-205ENST00000481238 MYO5BQ9ULV0 1848 aa31.17■■■□□ 2.58
TMED4-205ENST00000481238 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.58
TMED4-205ENST00000481238 TMEM132EQ6IEE7 984 aa31.12■■■□□ 2.57
TMED4-205ENST00000481238 SBNO2Q9Y2G9 1366 aa31.11■■■□□ 2.57
TMED4-205ENST00000481238 TRAK1Q9UPV9 953 aa31.1■■■□□ 2.57
TMED4-205ENST00000481238 MYO3AQ8NEV4 1616 aa31.1■■■□□ 2.57
TMED4-205ENST00000481238 TNRQ92752 1358 aa31.1■■■□□ 2.57
TMED4-205ENST00000481238 CENPJQ9HC77 1338 aaPredicted RBP31.09■■■□□ 2.57
TMED4-205ENST00000481238 PER1O15534 1290 aaPredicted RBP31.09■■■□□ 2.57
TMED4-205ENST00000481238 PANK3Q9H999 370 aa31.06■■■□□ 2.56
TMED4-205ENST00000481238 KTN1Q86UP2 1357 aaKnown RBP31.06■■■□□ 2.56
TMED4-205ENST00000481238 CCDC184Q52MB2 194 aa31.05■■■□□ 2.56
TMED4-205ENST00000481238 RIMS2Q9UQ26 1411 aa31.04■■■□□ 2.56
TMED4-205ENST00000481238 RALBP1Q15311 655 aa31.02■■■□□ 2.56
TMED4-205ENST00000481238 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.01■■■□□ 2.55
TMED4-205ENST00000481238 MRS2Q9HD23 443 aa31.01■■■□□ 2.55
TMED4-205ENST00000481238 HDGFP51858 240 aaKnown RBP30.97■■■□□ 2.55
TMED4-205ENST00000481238 CNGB1Q14028 1251 aaPredicted RBP30.97■■■□□ 2.55
TMED4-205ENST00000481238 ASXL1Q8IXJ9 1541 aa30.96■■■□□ 2.55
TMED4-205ENST00000481238 ALKQ9UM73 1620 aa30.96■■■□□ 2.55
TMED4-205ENST00000481238 KDM5AP29375 1690 aaKnown RBP30.95■■■□□ 2.55
TMED4-205ENST00000481238 CEBPAP49715 358 aaPredicted RBP30.94■■■□□ 2.54
TMED4-205ENST00000481238 NLRP1Q9C000 1473 aa30.93■■■□□ 2.54
TMED4-205ENST00000481238 MYBBP1AQ9BQG0 1328 aaKnown RBP30.92■■■□□ 2.54
TMED4-205ENST00000481238 QRICH2Q9H0J4 1663 aa30.91■■■□□ 2.54
TMED4-205ENST00000481238 PARD3Q8TEW0 1356 aa30.91■■■□□ 2.54
TMED4-205ENST00000481238 YTHDC2Q9H6S0 1430 aaKnown RBP30.91■■■□□ 2.54
TMED4-205ENST00000481238 ARHGEF28Q8N1W1 1705 aaKnown RBP30.91■■■□□ 2.54
TMED4-205ENST00000481238 SENP3Q9H4L4 574 aaPredicted RBP30.9■■■□□ 2.54
TMED4-205ENST00000481238 FER1L4A9Z1Z3 1794 aa30.9■■■□□ 2.54
TMED4-205ENST00000481238 PUS7Q96PZ0 661 aaKnown RBP30.89■■■□□ 2.54
TMED4-205ENST00000481238 STK26Q9P289 416 aa30.89■■■□□ 2.54
TMED4-205ENST00000481238 SCAF1Q9H7N4 1312 aaKnown RBP30.89■■■□□ 2.54
TMED4-205ENST00000481238 TMEM2Q9UHN6 1383 aa30.89■■■□□ 2.53
TMED4-205ENST00000481238 C3P01024 1663 aa30.88■■■□□ 2.53
TMED4-205ENST00000481238 KNSTRNQ9Y448 316 aa30.87■■■□□ 2.53
TMED4-205ENST00000481238 MYOM1P52179 1685 aa30.87■■■□□ 2.53
TMED4-205ENST00000481238 UBR1Q8IWV7 1749 aa30.87■■■□□ 2.53
TMED4-205ENST00000481238 BRD4O60885 1362 aaPredicted RBP30.85■■■□□ 2.53
TMED4-205ENST00000481238 FAM9BQ8IZU0 186 aa30.84■■■□□ 2.53
TMED4-205ENST00000481238 EVC2Q86UK5 1308 aa30.84■■■□□ 2.53
TMED4-205ENST00000481238 PTPRMP28827 1452 aa30.83■■■□□ 2.53
TMED4-205ENST00000481238 CC2D1BQ5T0F9 858 aaKnown RBP30.82■■■□□ 2.52
TMED4-205ENST00000481238 TMC1Q8TDI8 760 aa30.82■■■□□ 2.52
TMED4-205ENST00000481238 AMER1Q5JTC6 1135 aaPredicted RBP30.81■■■□□ 2.52
TMED4-205ENST00000481238 LRPPRCP42704 1394 aaKnown RBP30.81■■■□□ 2.52
TMED4-205ENST00000481238 GTF3C3Q9Y5Q9 886 aa30.8■■■□□ 2.52
TMED4-205ENST00000481238 HNRNPUQ00839 825 aaKnown RBP eCLIP30.79■■■□□ 2.52
TMED4-205ENST00000481238 NLRP13Q86W25 1043 aa30.79■■■□□ 2.52
TMED4-205ENST00000481238 PRAM1Q96QH2 718 aa30.79■■■□□ 2.52
TMED4-205ENST00000481238 NPC1L1Q9UHC9 1359 aa30.79■■■□□ 2.52
TMED4-205ENST00000481238 SETD1AO15047 1707 aaKnown RBP30.78■■■□□ 2.52
TMED4-205ENST00000481238 POGKQ9P215 609 aa30.78■■■□□ 2.52
TMED4-205ENST00000481238 NRXN3Q9Y4C0 1643 aa30.78■■■□□ 2.52
TMED4-205ENST00000481238 PNISRQ8TF01 805 aaKnown RBP30.77■■■□□ 2.52
TMED4-205ENST00000481238 DLC1Q96QB1 1528 aa30.77■■■□□ 2.52
TMED4-205ENST00000481238 ABCC11Q96J66 1382 aa30.77■■■□□ 2.52
TMED4-205ENST00000481238 TULP4Q9NRJ4 1543 aa30.76■■■□□ 2.51
TMED4-205ENST00000481238 SAFB2Q14151 953 aaKnown RBP eCLIP30.75■■■□□ 2.51
TMED4-205ENST00000481238 PLPPR3Q6T4P5 718 aa30.75■■■□□ 2.51
TMED4-205ENST00000481238 CARD14Q9BXL6 1004 aa30.74■■■□□ 2.51
TMED4-205ENST00000481238 LTKP29376 864 aa30.72■■■□□ 2.51
TMED4-205ENST00000481238 METP08581 1390 aa30.72■■■□□ 2.51
TMED4-205ENST00000481238 SLC12A5Q9H2X9 1139 aa30.71■■■□□ 2.51
TMED4-205ENST00000481238 PLEKHG1Q9ULL1 1385 aa30.71■■■□□ 2.51
TMED4-205ENST00000481238 TXNDC2Q86VQ3 553 aa30.71■■■□□ 2.51
TMED4-205ENST00000481238 THEMISQ8N1K5 641 aaPredicted RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms