RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 KCTD12Q96CX2 325 aaKnown RBP13.3□□□□□ -0.28
GTF3C3-211ENST00000481098 TMUB1Q9BVT8 246 aa13.3□□□□□ -0.28
GTF3C3-211ENST00000481098 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-211ENST00000481098 DAXXQ9UER7 740 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-211ENST00000481098 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
GTF3C3-211ENST00000481098 CLCN1P35523 988 aa13.27□□□□□ -0.29
GTF3C3-211ENST00000481098 SLF2Q8IX21 1173 aa13.27□□□□□ -0.29
GTF3C3-211ENST00000481098 NLRP7Q8WX94 980 aa13.27□□□□□ -0.29
GTF3C3-211ENST00000481098 BCAMP50895 628 aa13.26□□□□□ -0.29
GTF3C3-211ENST00000481098 MDM2Q00987 491 aaPredicted RBP13.26□□□□□ -0.29
GTF3C3-211ENST00000481098 GPCPD1Q9NPB8 672 aa13.26□□□□□ -0.29
GTF3C3-211ENST00000481098 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
GTF3C3-211ENST00000481098 PDE4DQ08499 809 aa13.24□□□□□ -0.29
GTF3C3-211ENST00000481098 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
GTF3C3-211ENST00000481098 PARP9Q8IXQ6 854 aa13.23□□□□□ -0.29
GTF3C3-211ENST00000481098 TSR3Q9UJK0 312 aaKnown RBP13.23□□□□□ -0.29
GTF3C3-211ENST00000481098 SULF1Q8IWU6 871 aa13.22□□□□□ -0.29
GTF3C3-211ENST00000481098 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
GTF3C3-211ENST00000481098 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
GTF3C3-211ENST00000481098 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
GTF3C3-211ENST00000481098 NYAP1Q6ZVC0 841 aa13.2□□□□□ -0.3
GTF3C3-211ENST00000481098 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
GTF3C3-211ENST00000481098 HCSTQ9UBK5 93 aa13.19□□□□□ -0.3
GTF3C3-211ENST00000481098 SLC10A3P09131 477 aa13.18□□□□□ -0.3
GTF3C3-211ENST00000481098 PPP4CP60510 307 aa13.17□□□□□ -0.3
GTF3C3-211ENST00000481098 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
GTF3C3-211ENST00000481098 GIGYF2Q6Y7W6 1299 aaKnown RBP13.17□□□□□ -0.3
GTF3C3-211ENST00000481098 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
GTF3C3-211ENST00000481098 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
GTF3C3-211ENST00000481098 RNF40O75150 1001 aa13.15□□□□□ -0.3
GTF3C3-211ENST00000481098 CD46P15529 392 aa13.15□□□□□ -0.3
GTF3C3-211ENST00000481098 PTPN5P54829 565 aa13.13□□□□□ -0.31
GTF3C3-211ENST00000481098 SSTR3P32745 418 aaPredicted RBP13.12□□□□□ -0.31
GTF3C3-211ENST00000481098 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
GTF3C3-211ENST00000481098 CFHP08603 1231 aa13.11□□□□□ -0.31
GTF3C3-211ENST00000481098 RDH13Q8NBN7 331 aa13.1□□□□□ -0.31
GTF3C3-211ENST00000481098 MS4A1P11836 297 aa13.09□□□□□ -0.31
GTF3C3-211ENST00000481098 GCGRP47871 477 aa13.09□□□□□ -0.31
GTF3C3-211ENST00000481098 APLP1P51693 650 aa13.09□□□□□ -0.31
GTF3C3-211ENST00000481098 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
GTF3C3-211ENST00000481098 KDM4CQ9H3R0 1056 aa13.09□□□□□ -0.31
GTF3C3-211ENST00000481098 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
GTF3C3-211ENST00000481098 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
GTF3C3-211ENST00000481098 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
GTF3C3-211ENST00000481098 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
GTF3C3-211ENST00000481098 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
GTF3C3-211ENST00000481098 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
GTF3C3-211ENST00000481098 KDM4AO75164 1064 aa13.01□□□□□ -0.33
GTF3C3-211ENST00000481098 USP46P62068 366 aa13.01□□□□□ -0.33
GTF3C3-211ENST00000481098 ITGBL1O95965 494 aaPredicted RBP12.98□□□□□ -0.33
GTF3C3-211ENST00000481098 FUT2Q10981 343 aa12.98□□□□□ -0.33
GTF3C3-211ENST00000481098 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
GTF3C3-211ENST00000481098 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
GTF3C3-211ENST00000481098 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
GTF3C3-211ENST00000481098 SPIRE2Q8WWL2 714 aa12.97□□□□□ -0.33
GTF3C3-211ENST00000481098 FAM117AQ9C073 453 aa12.97□□□□□ -0.33
GTF3C3-211ENST00000481098 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
GTF3C3-211ENST00000481098 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
GTF3C3-211ENST00000481098 HOXA2O43364 376 aa12.95□□□□□ -0.34
GTF3C3-211ENST00000481098 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
GTF3C3-211ENST00000481098 MORN1Q5T089 497 aa12.95□□□□□ -0.34
GTF3C3-211ENST00000481098 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
GTF3C3-211ENST00000481098 MTRQ99707 1265 aa12.94□□□□□ -0.34
GTF3C3-211ENST00000481098 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
GTF3C3-211ENST00000481098 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
GTF3C3-211ENST00000481098 TBC1D2Q9BYX2 928 aa12.93□□□□□ -0.34
GTF3C3-211ENST00000481098 IL21Q9HBE4 155 aa12.92□□□□□ -0.34
GTF3C3-211ENST00000481098 GJA5P36382 358 aa12.91□□□□□ -0.34
GTF3C3-211ENST00000481098 IFFO2Q5TF58 517 aa12.91□□□□□ -0.34
GTF3C3-211ENST00000481098 NR1I2O75469 434 aa12.9□□□□□ -0.34
GTF3C3-211ENST00000481098 PUS10Q3MIT2 529 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-211ENST00000481098 COPS2P61201 443 aa12.89□□□□□ -0.35
GTF3C3-211ENST00000481098 RSPH6AQ9H0K4 717 aa12.89□□□□□ -0.35
GTF3C3-211ENST00000481098 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
GTF3C3-211ENST00000481098 SCUBE3Q8IX30 993 aa12.88□□□□□ -0.35
GTF3C3-211ENST00000481098 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
GTF3C3-211ENST00000481098 ZPR1O75312 459 aa12.87□□□□□ -0.35
GTF3C3-211ENST00000481098 KCNC4Q03721 635 aa12.87□□□□□ -0.35
GTF3C3-211ENST00000481098 SLC27A5Q9Y2P5 690 aa12.87□□□□□ -0.35
GTF3C3-211ENST00000481098 MOXD2PA6NHM9 499 aa12.86□□□□□ -0.35
GTF3C3-211ENST00000481098 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
GTF3C3-211ENST00000481098 SPTLC1O15269 473 aa12.85□□□□□ -0.35
GTF3C3-211ENST00000481098 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
GTF3C3-211ENST00000481098 HLA-CQ95604 372 aa12.85□□□□□ -0.35
GTF3C3-211ENST00000481098 THAP11Q96EK4 314 aa12.85□□□□□ -0.35
GTF3C3-211ENST00000481098 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
GTF3C3-211ENST00000481098 TUSC1Q2TAM9 212 aa12.84□□□□□ -0.35
GTF3C3-211ENST00000481098 ZNF516Q92618 1163 aa12.84□□□□□ -0.35
GTF3C3-211ENST00000481098 FDX1P10109 184 aa12.83□□□□□ -0.36
GTF3C3-211ENST00000481098 Q3C1V9 767 aa12.83□□□□□ -0.36
GTF3C3-211ENST00000481098 PLA2G2EQ9NZK7 142 aa12.83□□□□□ -0.36
GTF3C3-211ENST00000481098 NDUFV2P19404 249 aa12.82□□□□□ -0.36
GTF3C3-211ENST00000481098 IL27Q8NEV9 243 aa12.82□□□□□ -0.36
GTF3C3-211ENST00000481098 GUCA2AQ02747 115 aa12.81□□□□□ -0.36
GTF3C3-211ENST00000481098 BRICD5Q6PL45 260 aa12.81□□□□□ -0.36
GTF3C3-211ENST00000481098 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
GTF3C3-211ENST00000481098 PCDHGC3Q9UN70 934 aa12.81□□□□□ -0.36
GTF3C3-211ENST00000481098 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
GTF3C3-211ENST00000481098 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
GTF3C3-211ENST00000481098 CLK2P49760 499 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms