RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 SMAPO00193 183 aa10.96□□□□□ -0.65
CKAP2-206ENST00000480747 PTGDRQ13258 359 aa10.96□□□□□ -0.65
CKAP2-206ENST00000480747 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
CKAP2-206ENST00000480747 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
CKAP2-206ENST00000480747 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.95□□□□□ -0.66
CKAP2-206ENST00000480747 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
CKAP2-206ENST00000480747 CCDC102AQ96A19 550 aa10.93□□□□□ -0.66
CKAP2-206ENST00000480747 NYAP1Q6ZVC0 841 aa10.92□□□□□ -0.66
CKAP2-206ENST00000480747 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
CKAP2-206ENST00000480747 MINK1Q8N4C8 1332 aaPredicted RBP10.9□□□□□ -0.66
CKAP2-206ENST00000480747 FCHSD2O94868 740 aa10.9□□□□□ -0.66
CKAP2-206ENST00000480747 SAMD7Q7Z3H4 446 aa10.9□□□□□ -0.66
CKAP2-206ENST00000480747 PARP9Q8IXQ6 854 aa10.9□□□□□ -0.66
CKAP2-206ENST00000480747 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
CKAP2-206ENST00000480747 HPS5Q9UPZ3 1129 aa10.9□□□□□ -0.66
CKAP2-206ENST00000480747 TRIM26Q12899 539 aaPredicted RBP10.89□□□□□ -0.67
CKAP2-206ENST00000480747 MAP2K5Q13163 448 aa10.89□□□□□ -0.67
CKAP2-206ENST00000480747 ARID3AQ99856 593 aa10.89□□□□□ -0.67
CKAP2-206ENST00000480747 IRF6O14896 467 aa10.88□□□□□ -0.67
CKAP2-206ENST00000480747 AMHR2Q16671 573 aa10.88□□□□□ -0.67
CKAP2-206ENST00000480747 FECHP22830 423 aa10.87□□□□□ -0.67
CKAP2-206ENST00000480747 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
CKAP2-206ENST00000480747 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
CKAP2-206ENST00000480747 IFFO2Q5TF58 517 aa10.86□□□□□ -0.67
CKAP2-206ENST00000480747 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
CKAP2-206ENST00000480747 EYA1Q99502 592 aa10.86□□□□□ -0.67
CKAP2-206ENST00000480747 PPP4CP60510 307 aa10.84□□□□□ -0.67
CKAP2-206ENST00000480747 HIC1Q14526 733 aa10.84□□□□□ -0.67
CKAP2-206ENST00000480747 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
CKAP2-206ENST00000480747 HRCP23327 699 aa10.83□□□□□ -0.68
CKAP2-206ENST00000480747 RBM46Q8TBY0 533 aaKnown RBP10.83□□□□□ -0.68
CKAP2-206ENST00000480747 GNPATO15228 680 aa10.82□□□□□ -0.68
CKAP2-206ENST00000480747 ITGBL1O95965 494 aaPredicted RBP10.82□□□□□ -0.68
CKAP2-206ENST00000480747 SWT1Q5T5J6 900 aaKnown RBP10.82□□□□□ -0.68
CKAP2-206ENST00000480747 RNF40O75150 1001 aa10.81□□□□□ -0.68
CKAP2-206ENST00000480747 SLF2Q8IX21 1173 aa10.8□□□□□ -0.68
CKAP2-206ENST00000480747 NECTIN2Q92692 538 aa10.8□□□□□ -0.68
CKAP2-206ENST00000480747 DNAJB2P25686 324 aa10.79□□□□□ -0.68
CKAP2-206ENST00000480747 SLC4A3P48751 1232 aa10.79□□□□□ -0.68
CKAP2-206ENST00000480747 APBB1O00213 710 aa10.78□□□□□ -0.68
CKAP2-206ENST00000480747 FAM161AQ3B820 660 aa10.77□□□□□ -0.69
CKAP2-206ENST00000480747 MS4A1P11836 297 aa10.76□□□□□ -0.69
CKAP2-206ENST00000480747 FLIIQ13045 1269 aa10.76□□□□□ -0.69
CKAP2-206ENST00000480747 TTLL12Q14166 644 aaPredicted RBP10.76□□□□□ -0.69
CKAP2-206ENST00000480747 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
CKAP2-206ENST00000480747 A0A0G2JS52 829 aa10.75□□□□□ -0.69
CKAP2-206ENST00000480747 RCCD1A6NED2 376 aa10.75□□□□□ -0.69
CKAP2-206ENST00000480747 OATP04181 439 aa10.75□□□□□ -0.69
CKAP2-206ENST00000480747 KCNC4Q03721 635 aa10.75□□□□□ -0.69
CKAP2-206ENST00000480747 REPIN1Q9BWE0 567 aaKnown RBP10.75□□□□□ -0.69
CKAP2-206ENST00000480747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.74□□□□□ -0.69
CKAP2-206ENST00000480747 PXYLP1Q8TE99 480 aa10.74□□□□□ -0.69
CKAP2-206ENST00000480747 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
CKAP2-206ENST00000480747 APLP1P51693 650 aa10.73□□□□□ -0.69
CKAP2-206ENST00000480747 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
CKAP2-206ENST00000480747 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
CKAP2-206ENST00000480747 METTL3Q86U44 580 aaKnown RBP10.72□□□□□ -0.69
CKAP2-206ENST00000480747 PRR14Q9BWN1 585 aa10.7□□□□□ -0.7
CKAP2-206ENST00000480747 TJAP1Q5JTD0 557 aa10.69□□□□□ -0.7
CKAP2-206ENST00000480747 MTRQ99707 1265 aa10.69□□□□□ -0.7
CKAP2-206ENST00000480747 IL21Q9HBE4 155 aa10.68□□□□□ -0.7
CKAP2-206ENST00000480747 A6NJR5 290 aa10.67□□□□□ -0.7
CKAP2-206ENST00000480747 TRAK2O60296 914 aa10.67□□□□□ -0.7
CKAP2-206ENST00000480747 RGS20O76081 388 aa10.67□□□□□ -0.7
CKAP2-206ENST00000480747 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
CKAP2-206ENST00000480747 MCM6Q14566 821 aa10.66□□□□□ -0.7
CKAP2-206ENST00000480747 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
CKAP2-206ENST00000480747 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
CKAP2-206ENST00000480747 CFHP08603 1231 aa10.63□□□□□ -0.71
CKAP2-206ENST00000480747 KMT5BQ4FZB7 885 aa10.63□□□□□ -0.71
CKAP2-206ENST00000480747 SH3D19Q5HYK7 790 aa10.63□□□□□ -0.71
CKAP2-206ENST00000480747 PHOX2BQ99453 314 aa10.63□□□□□ -0.71
CKAP2-206ENST00000480747 PCDHB3Q9Y5E6 796 aa10.62□□□□□ -0.71
CKAP2-206ENST00000480747 SLC10A3P09131 477 aa10.61□□□□□ -0.71
CKAP2-206ENST00000480747 COPS2P61201 443 aa10.61□□□□□ -0.71
CKAP2-206ENST00000480747 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
CKAP2-206ENST00000480747 ZNF516Q92618 1163 aa10.6□□□□□ -0.71
CKAP2-206ENST00000480747 MDM2Q00987 491 aaPredicted RBP10.59□□□□□ -0.71
CKAP2-206ENST00000480747 RSPH4AQ5TD94 716 aa10.59□□□□□ -0.71
CKAP2-206ENST00000480747 POM121Q96HA1 1249 aa10.59□□□□□ -0.71
CKAP2-206ENST00000480747 RANGAP1P46060 587 aaPredicted RBP10.58□□□□□ -0.72
CKAP2-206ENST00000480747 NLRP7Q8WX94 980 aa10.58□□□□□ -0.72
CKAP2-206ENST00000480747 BLOC1S3Q6QNY0 202 aa10.57□□□□□ -0.72
CKAP2-206ENST00000480747 PROCA1Q8NCQ7 364 aaPredicted RBP10.57□□□□□ -0.72
CKAP2-206ENST00000480747 ZPR1O75312 459 aa10.56□□□□□ -0.72
CKAP2-206ENST00000480747 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
CKAP2-206ENST00000480747 CLCN1P35523 988 aa10.55□□□□□ -0.72
CKAP2-206ENST00000480747 PROSER2Q86WR7 435 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-206ENST00000480747 SULF1Q8IWU6 871 aa10.55□□□□□ -0.72
CKAP2-206ENST00000480747 RDH13Q8NBN7 331 aa10.55□□□□□ -0.72
CKAP2-206ENST00000480747 GPCPD1Q9NPB8 672 aa10.55□□□□□ -0.72
CKAP2-206ENST00000480747 ZNF777Q9ULD5 760 aaPredicted RBP10.55□□□□□ -0.72
CKAP2-206ENST00000480747 DDX11L8A8MPP1 907 aa10.54□□□□□ -0.72
CKAP2-206ENST00000480747 SSTR3P32745 418 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-206ENST00000480747 SKIV2LQ15477 1246 aaKnown RBP10.54□□□□□ -0.72
CKAP2-206ENST00000480747 NPM2Q86SE8 214 aaKnown RBP10.54□□□□□ -0.72
CKAP2-206ENST00000480747 FNBP4Q8N3X1 1017 aaPredicted RBP10.54□□□□□ -0.72
CKAP2-206ENST00000480747 NKX2-3Q8TAU0 364 aa10.54□□□□□ -0.72
CKAP2-206ENST00000480747 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
CKAP2-206ENST00000480747 BEGAINQ9BUH8 593 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms