RNA–Protein interactions for RNA: ENST00000480617.1

CNKSR1-205, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-205ENST00000480617 MEX3CQ5U5Q3 659 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-205ENST00000480617 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
CNKSR1-205ENST00000480617 NOS1P29475 1434 aa11.79□□□□□ -0.52
CNKSR1-205ENST00000480617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.79□□□□□ -0.52
CNKSR1-205ENST00000480617 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
CNKSR1-205ENST00000480617 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
CNKSR1-205ENST00000480617 CADPS2Q86UW7 1296 aa11.78□□□□□ -0.52
CNKSR1-205ENST00000480617 KIF15Q9NS87 1388 aa11.78□□□□□ -0.52
CNKSR1-205ENST00000480617 MYOM3Q5VTT5 1437 aa11.77□□□□□ -0.52
CNKSR1-205ENST00000480617 ERBINQ96RT1 1412 aa11.77□□□□□ -0.52
CNKSR1-205ENST00000480617 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.53
CNKSR1-205ENST00000480617 LMTK2Q8IWU2 1503 aa11.76□□□□□ -0.53
CNKSR1-205ENST00000480617 BCANQ96GW7 911 aa11.76□□□□□ -0.53
CNKSR1-205ENST00000480617 KANK1Q14678 1352 aa11.76□□□□□ -0.53
CNKSR1-205ENST00000480617 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 CHD2O14647 1828 aaKnown RBP11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 RBM6P78332 1123 aaKnown RBP11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 KANK4Q5T7N3 995 aaPredicted RBP11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 BRINP3Q76B58 766 aa11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 QTRT2Q9H974 415 aaKnown RBP11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 AFF2P51816 1311 aa11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 ZFYVE9O95405 1425 aa11.75□□□□□ -0.53
CNKSR1-205ENST00000480617 ATF3P18847 181 aa11.74□□□□□ -0.53
CNKSR1-205ENST00000480617 ABCC5O15440 1437 aa11.74□□□□□ -0.53
CNKSR1-205ENST00000480617 NUTM2BA6NNL0 878 aaPredicted RBP11.73□□□□□ -0.53
CNKSR1-205ENST00000480617 NUTM2EB1AL46 878 aaPredicted RBP11.73□□□□□ -0.53
CNKSR1-205ENST00000480617 SHPRHQ149N8 1683 aa11.73□□□□□ -0.53
CNKSR1-205ENST00000480617 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
CNKSR1-205ENST00000480617 SETD5Q9C0A6 1442 aa11.72□□□□□ -0.53
CNKSR1-205ENST00000480617 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
CNKSR1-205ENST00000480617 LRRC59Q96AG4 307 aaKnown RBP11.72□□□□□ -0.53
CNKSR1-205ENST00000480617 DIP2AQ14689 1571 aa11.71□□□□□ -0.53
CNKSR1-205ENST00000480617 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
CNKSR1-205ENST00000480617 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.71□□□□□ -0.53
CNKSR1-205ENST00000480617 ADGRB3O60242 1522 aa11.7□□□□□ -0.54
CNKSR1-205ENST00000480617 ADAMTS13Q76LX8 1427 aa11.7□□□□□ -0.54
CNKSR1-205ENST00000480617 RGS12O14924 1447 aa11.69□□□□□ -0.54
CNKSR1-205ENST00000480617 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
CNKSR1-205ENST00000480617 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
CNKSR1-205ENST00000480617 AMOTL2Q9Y2J4 779 aa11.69□□□□□ -0.54
CNKSR1-205ENST00000480617 PPP1R15AO75807 674 aaPredicted RBP11.68□□□□□ -0.54
CNKSR1-205ENST00000480617 NUTM2DQ5VT03 806 aaPredicted RBP11.68□□□□□ -0.54
CNKSR1-205ENST00000480617 NGLY1Q96IV0 654 aa11.68□□□□□ -0.54
CNKSR1-205ENST00000480617 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
CNKSR1-205ENST00000480617 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
CNKSR1-205ENST00000480617 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
CNKSR1-205ENST00000480617 RPRD2Q5VT52 1461 aaKnown RBP11.67□□□□□ -0.54
CNKSR1-205ENST00000480617 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
CNKSR1-205ENST00000480617 DCCP43146 1447 aa11.66□□□□□ -0.54
CNKSR1-205ENST00000480617 DAPK1P53355 1430 aa11.66□□□□□ -0.54
CNKSR1-205ENST00000480617 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
CNKSR1-205ENST00000480617 CHIC2Q9UKJ5 165 aa11.65□□□□□ -0.54
CNKSR1-205ENST00000480617 PTPRUQ92729 1446 aa11.65□□□□□ -0.54
CNKSR1-205ENST00000480617 ATAD2Q6PL18 1390 aa11.65□□□□□ -0.55
CNKSR1-205ENST00000480617 PNPLA6Q8IY17 1366 aa11.65□□□□□ -0.55
CNKSR1-205ENST00000480617 TMEM131LA2VDJ0 1609 aa11.64□□□□□ -0.55
CNKSR1-205ENST00000480617 MST1RQ04912 1400 aa11.63□□□□□ -0.55
CNKSR1-205ENST00000480617 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
CNKSR1-205ENST00000480617 ASXL1Q8IXJ9 1541 aa11.62□□□□□ -0.55
CNKSR1-205ENST00000480617 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-205ENST00000480617 TRPC5Q9UL62 973 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-205ENST00000480617 USP21Q9UK80 565 aa11.61□□□□□ -0.55
CNKSR1-205ENST00000480617 SETBP1Q9Y6X0 1596 aa11.6□□□□□ -0.55
CNKSR1-205ENST00000480617 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
CNKSR1-205ENST00000480617 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
CNKSR1-205ENST00000480617 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
CNKSR1-205ENST00000480617 EP400Q96L91 3159 aa11.59□□□□□ -0.55
CNKSR1-205ENST00000480617 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
CNKSR1-205ENST00000480617 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
CNKSR1-205ENST00000480617 MYO5BQ9ULV0 1848 aa11.58□□□□□ -0.56
CNKSR1-205ENST00000480617 PTPN23Q9H3S7 1636 aa11.58□□□□□ -0.56
CNKSR1-205ENST00000480617 ADGRL2O95490 1459 aa11.57□□□□□ -0.56
CNKSR1-205ENST00000480617 TRPM2O94759 1503 aa11.57□□□□□ -0.56
CNKSR1-205ENST00000480617 ATRNO75882 1429 aa11.57□□□□□ -0.56
CNKSR1-205ENST00000480617 ANKRD50Q9ULJ7 1429 aa11.57□□□□□ -0.56
CNKSR1-205ENST00000480617 GCC2Q8IWJ2 1684 aa11.55□□□□□ -0.56
CNKSR1-205ENST00000480617 METP08581 1390 aa11.55□□□□□ -0.56
CNKSR1-205ENST00000480617 PTCH1Q13635 1447 aa11.55□□□□□ -0.56
CNKSR1-205ENST00000480617 GJD4Q96KN9 370 aaPredicted RBP11.54□□□□□ -0.56
CNKSR1-205ENST00000480617 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
CNKSR1-205ENST00000480617 BCL9LQ86UU0 1499 aa11.54□□□□□ -0.56
CNKSR1-205ENST00000480617 ADGRL3Q9HAR2 1447 aa11.53□□□□□ -0.56
CNKSR1-205ENST00000480617 C1orf167Q5SNV9 1468 aa11.53□□□□□ -0.56
CNKSR1-205ENST00000480617 XRN1Q8IZH2 1706 aaKnown RBP11.53□□□□□ -0.56
CNKSR1-205ENST00000480617 UNC13BO14795 1591 aa11.53□□□□□ -0.56
CNKSR1-205ENST00000480617 LAMC1P11047 1609 aa11.53□□□□□ -0.56
CNKSR1-205ENST00000480617 LOC105371045A0A1W2PR82 267 aa11.51□□□□□ -0.57
CNKSR1-205ENST00000480617 NRXN3Q9Y4C0 1643 aa11.5□□□□□ -0.57
CNKSR1-205ENST00000480617 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-205ENST00000480617 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
CNKSR1-205ENST00000480617 DEFB132Q7Z7B7 95 aa11.49□□□□□ -0.57
CNKSR1-205ENST00000480617 MYOM2P54296 1465 aa11.48□□□□□ -0.57
CNKSR1-205ENST00000480617 E9PCH4 1651 aa11.48□□□□□ -0.57
CNKSR1-205ENST00000480617 APLP2Q06481 763 aa11.47□□□□□ -0.57
CNKSR1-205ENST00000480617 UNC5CLQ8IV45 518 aa11.47□□□□□ -0.57
CNKSR1-205ENST00000480617 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.57
CNKSR1-205ENST00000480617 NUP155O75694 1391 aa11.45□□□□□ -0.58
CNKSR1-205ENST00000480617 FAM50AQ14320 339 aaKnown RBP11.45□□□□□ -0.58
CNKSR1-205ENST00000480617 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
CNKSR1-205ENST00000480617 NPHP3Q7Z494 1330 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms