RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 ADGRB3O60242 1522 aa12.23□□□□□ -0.45
CTPS1-209ENST00000480420 ARHGAP23Q9P227 1491 aa12.23□□□□□ -0.45
CTPS1-209ENST00000480420 LRRC7Q96NW7 1537 aa12.22□□□□□ -0.45
CTPS1-209ENST00000480420 NOS1P29475 1434 aa12.22□□□□□ -0.45
CTPS1-209ENST00000480420 ROCK1Q13464 1354 aa12.22□□□□□ -0.45
CTPS1-209ENST00000480420 PROSER2Q86WR7 435 aaPredicted RBP12.22□□□□□ -0.45
CTPS1-209ENST00000480420 HDGFP51858 240 aaKnown RBP12.21□□□□□ -0.45
CTPS1-209ENST00000480420 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
CTPS1-209ENST00000480420 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.46
CTPS1-209ENST00000480420 KDM5AP29375 1690 aaKnown RBP12.2□□□□□ -0.46
CTPS1-209ENST00000480420 IQGAP3Q86VI3 1631 aa12.2□□□□□ -0.46
CTPS1-209ENST00000480420 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
CTPS1-209ENST00000480420 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
CTPS1-209ENST00000480420 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
CTPS1-209ENST00000480420 XIRP1Q702N8 1843 aaKnown RBP12.18□□□□□ -0.46
CTPS1-209ENST00000480420 ADRA2BP18089 450 aa12.18□□□□□ -0.46
CTPS1-209ENST00000480420 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
CTPS1-209ENST00000480420 TMEM131LA2VDJ0 1609 aa12.17□□□□□ -0.46
CTPS1-209ENST00000480420 KCNA6P17658 529 aa12.16□□□□□ -0.46
CTPS1-209ENST00000480420 TMEM94Q12767 1356 aa12.16□□□□□ -0.46
CTPS1-209ENST00000480420 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
CTPS1-209ENST00000480420 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTPS1-209ENST00000480420 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
CTPS1-209ENST00000480420 SETD1AO15047 1707 aaKnown RBP12.12□□□□□ -0.47
CTPS1-209ENST00000480420 CHD2O14647 1828 aaKnown RBP12.12□□□□□ -0.47
CTPS1-209ENST00000480420 PLEKHG1Q9ULL1 1385 aa12.12□□□□□ -0.47
CTPS1-209ENST00000480420 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
CTPS1-209ENST00000480420 MSH6P52701 1360 aa12.11□□□□□ -0.47
CTPS1-209ENST00000480420 KIF1BO60333 1816 aa12.11□□□□□ -0.47
CTPS1-209ENST00000480420 NAIPQ13075 1403 aa12.11□□□□□ -0.47
CTPS1-209ENST00000480420 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
CTPS1-209ENST00000480420 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
CTPS1-209ENST00000480420 ROBO1Q9Y6N7 1651 aa12.09□□□□□ -0.47
CTPS1-209ENST00000480420 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
CTPS1-209ENST00000480420 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.48
CTPS1-209ENST00000480420 CLTCL1P53675 1640 aa12.08□□□□□ -0.48
CTPS1-209ENST00000480420 ATF3P18847 181 aa12.07□□□□□ -0.48
CTPS1-209ENST00000480420 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
CTPS1-209ENST00000480420 AMOTL2Q9Y2J4 779 aa12.07□□□□□ -0.48
CTPS1-209ENST00000480420 SLAIN2Q9P270 581 aa12.06□□□□□ -0.48
CTPS1-209ENST00000480420 TRPM2O94759 1503 aa12.06□□□□□ -0.48
CTPS1-209ENST00000480420 PHLPP1O60346 1717 aa12.05□□□□□ -0.48
CTPS1-209ENST00000480420 ADAMTS13Q76LX8 1427 aa12.04□□□□□ -0.48
CTPS1-209ENST00000480420 DIP2AQ14689 1571 aa12.04□□□□□ -0.48
CTPS1-209ENST00000480420 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
CTPS1-209ENST00000480420 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
CTPS1-209ENST00000480420 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
CTPS1-209ENST00000480420 PIAS4Q8N2W9 510 aaPredicted RBP12.03□□□□□ -0.48
CTPS1-209ENST00000480420 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
CTPS1-209ENST00000480420 C19orf44Q9H6X5 657 aa12.02□□□□□ -0.49
CTPS1-209ENST00000480420 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
CTPS1-209ENST00000480420 PTPRUQ92729 1446 aa12.01□□□□□ -0.49
CTPS1-209ENST00000480420 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
CTPS1-209ENST00000480420 METP08581 1390 aa12□□□□□ -0.49
CTPS1-209ENST00000480420 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
CTPS1-209ENST00000480420 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
CTPS1-209ENST00000480420 PIK3R4Q99570 1358 aa11.99□□□□□ -0.49
CTPS1-209ENST00000480420 NEXMIFQ5QGS0 1516 aa11.99□□□□□ -0.49
CTPS1-209ENST00000480420 SETBP1Q9Y6X0 1596 aa11.98□□□□□ -0.49
CTPS1-209ENST00000480420 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
CTPS1-209ENST00000480420 NUTM2BA6NNL0 878 aaPredicted RBP11.97□□□□□ -0.49
CTPS1-209ENST00000480420 NUTM2EB1AL46 878 aaPredicted RBP11.97□□□□□ -0.49
CTPS1-209ENST00000480420 NUTM2AQ8IVF1 878 aaPredicted RBP11.97□□□□□ -0.49
CTPS1-209ENST00000480420 CCDC144AA2RUR9 1427 aa11.96□□□□□ -0.49
CTPS1-209ENST00000480420 STK26Q9P289 416 aa11.96□□□□□ -0.49
CTPS1-209ENST00000480420 PPLO60437 1756 aa11.96□□□□□ -0.49
CTPS1-209ENST00000480420 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
CTPS1-209ENST00000480420 NCOA3Q9Y6Q9 1424 aa11.94□□□□□ -0.5
CTPS1-209ENST00000480420 JCADQ9P266 1359 aa11.94□□□□□ -0.5
CTPS1-209ENST00000480420 COL16A1Q07092 1604 aaPredicted RBP11.94□□□□□ -0.5
CTPS1-209ENST00000480420 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
CTPS1-209ENST00000480420 RPGRIP1LQ68CZ1 1315 aa11.93□□□□□ -0.5
CTPS1-209ENST00000480420 BRINP3Q76B58 766 aa11.93□□□□□ -0.5
CTPS1-209ENST00000480420 DDX17Q92841 729 aaKnown RBP11.93□□□□□ -0.5
CTPS1-209ENST00000480420 NALCNQ8IZF0 1738 aa11.93□□□□□ -0.5
CTPS1-209ENST00000480420 LRP6O75581 1613 aa11.93□□□□□ -0.5
CTPS1-209ENST00000480420 ADGRF5Q8IZF2 1346 aa11.91□□□□□ -0.5
CTPS1-209ENST00000480420 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
CTPS1-209ENST00000480420 TMEM132EQ6IEE7 984 aa11.91□□□□□ -0.5
CTPS1-209ENST00000480420 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTPS1-209ENST00000480420 ADGRL3Q9HAR2 1447 aa11.9□□□□□ -0.5
CTPS1-209ENST00000480420 RAB3GAP2Q9H2M9 1393 aa11.9□□□□□ -0.5
CTPS1-209ENST00000480420 ROBO2Q9HCK4 1378 aa11.9□□□□□ -0.5
CTPS1-209ENST00000480420 MST1RQ04912 1400 aa11.89□□□□□ -0.51
CTPS1-209ENST00000480420 ASXL1Q8IXJ9 1541 aa11.89□□□□□ -0.51
CTPS1-209ENST00000480420 SHPRHQ149N8 1683 aa11.88□□□□□ -0.51
CTPS1-209ENST00000480420 AHDC1Q5TGY3 1603 aaPredicted RBP11.88□□□□□ -0.51
CTPS1-209ENST00000480420 DCCP43146 1447 aa11.87□□□□□ -0.51
CTPS1-209ENST00000480420 WAPLQ7Z5K2 1190 aa11.87□□□□□ -0.51
CTPS1-209ENST00000480420 ORAI2Q96SN7 254 aa11.87□□□□□ -0.51
CTPS1-209ENST00000480420 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
CTPS1-209ENST00000480420 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
CTPS1-209ENST00000480420 IFT172Q9UG01 1749 aa11.86□□□□□ -0.51
CTPS1-209ENST00000480420 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
CTPS1-209ENST00000480420 SAFB2Q14151 953 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTPS1-209ENST00000480420 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
CTPS1-209ENST00000480420 LRRC59Q96AG4 307 aaKnown RBP11.86□□□□□ -0.51
CTPS1-209ENST00000480420 ANKRD30BQ9BXX2 1392 aa11.86□□□□□ -0.51
CTPS1-209ENST00000480420 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
CTPS1-209ENST00000480420 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms