RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 IQGAP1P46940 1657 aa38.53■■■■□ 3.76
TNFRSF25-213ENST00000480393 RPGRIP1LQ68CZ1 1315 aa38.53■■■■□ 3.76
TNFRSF25-213ENST00000480393 NRXN1Q9ULB1 1477 aa38.53■■■■□ 3.76
TNFRSF25-213ENST00000480393 PPLO60437 1756 aa38.52■■■■□ 3.76
TNFRSF25-213ENST00000480393 ADGRF5Q8IZF2 1346 aa38.52■■■■□ 3.76
TNFRSF25-213ENST00000480393 SLC52A1Q9NWF4 448 aa38.51■■■■□ 3.76
TNFRSF25-213ENST00000480393 MLECQ14165 292 aa38.5■■■■□ 3.75
TNFRSF25-213ENST00000480393 SCAF11Q99590 1463 aaKnown RBP38.49■■■■□ 3.75
TNFRSF25-213ENST00000480393 ERVK-7P63135 1459 aa38.48■■■■□ 3.75
TNFRSF25-213ENST00000480393 TRHP20396 242 aaPredicted RBP38.48■■■■□ 3.75
TNFRSF25-213ENST00000480393 IDI1Q13907 227 aa38.43■■■■□ 3.74
TNFRSF25-213ENST00000480393 EIF3AQ14152 1382 aaKnown RBP38.42■■■■□ 3.74
TNFRSF25-213ENST00000480393 CFAP70Q5T0N1 1121 aa38.42■■■■□ 3.74
TNFRSF25-213ENST00000480393 TESK2Q96S53 571 aa38.41■■■■□ 3.74
TNFRSF25-213ENST00000480393 ESF1Q9H501 851 aaKnown RBP38.41■■■■□ 3.74
TNFRSF25-213ENST00000480393 FBXO31Q5XUX0 539 aaPredicted RBP38.4■■■■□ 3.74
TNFRSF25-213ENST00000480393 PIK3C2GO75747 1445 aa38.39■■■■□ 3.74
TNFRSF25-213ENST00000480393 NEXMIFQ5QGS0 1516 aa38.38■■■■□ 3.73
TNFRSF25-213ENST00000480393 TMF1P82094 1093 aa38.38■■■■□ 3.73
TNFRSF25-213ENST00000480393 DISP3Q9P2K9 1392 aa38.35■■■■□ 3.73
TNFRSF25-213ENST00000480393 TMEM131LA2VDJ0 1609 aa38.35■■■■□ 3.73
TNFRSF25-213ENST00000480393 SPATA31D1Q6ZQQ2 1576 aa38.34■■■■□ 3.73
TNFRSF25-213ENST00000480393 SETBP1Q9Y6X0 1596 aa38.34■■■■□ 3.73
TNFRSF25-213ENST00000480393 PRKRIP1Q9H875 184 aaPredicted RBP38.33■■■■□ 3.73
TNFRSF25-213ENST00000480393 VGFO15240 615 aaPredicted RBP38.32■■■■□ 3.72
TNFRSF25-213ENST00000480393 MYO5BQ9ULV0 1848 aa38.28■■■■□ 3.72
TNFRSF25-213ENST00000480393 C14orf93Q9H972 538 aaKnown RBP38.26■■■■□ 3.72
TNFRSF25-213ENST00000480393 STAG3Q9UJ98 1225 aa38.24■■■■□ 3.71
TNFRSF25-213ENST00000480393 ZFYVE9O95405 1425 aa38.24■■■■□ 3.71
TNFRSF25-213ENST00000480393 NUTM2DQ5VT03 806 aaPredicted RBP38.24■■■■□ 3.71
TNFRSF25-213ENST00000480393 ZMYM3Q14202 1370 aa38.23■■■■□ 3.71
TNFRSF25-213ENST00000480393 ADGRB1O14514 1584 aa38.19■■■■□ 3.7
TNFRSF25-213ENST00000480393 CDCA8Q53HL2 280 aa38.19■■■■□ 3.7
TNFRSF25-213ENST00000480393 MYO3AQ8NEV4 1616 aa38.17■■■■□ 3.7
TNFRSF25-213ENST00000480393 SLC24A1O60721 1099 aa38.16■■■■□ 3.7
TNFRSF25-213ENST00000480393 A2ML1A8K2U0 1454 aa38.1■■■■□ 3.69
TNFRSF25-213ENST00000480393 CNGB1Q14028 1251 aaPredicted RBP38.09■■■■□ 3.69
TNFRSF25-213ENST00000480393 TMEM132EQ6IEE7 984 aa38.08■■■■□ 3.69
TNFRSF25-213ENST00000480393 CENPJQ9HC77 1338 aaPredicted RBP38.08■■■■□ 3.69
TNFRSF25-213ENST00000480393 TRAK1Q9UPV9 953 aa38.07■■■■□ 3.69
TNFRSF25-213ENST00000480393 KDM5AP29375 1690 aaKnown RBP38.07■■■■□ 3.68
TNFRSF25-213ENST00000480393 TNRQ92752 1358 aa38.07■■■■□ 3.68
TNFRSF25-213ENST00000480393 SBNO2Q9Y2G9 1366 aa38.06■■■■□ 3.68
TNFRSF25-213ENST00000480393 MRS2Q9HD23 443 aa38.06■■■■□ 3.68
TNFRSF25-213ENST00000480393 KTN1Q86UP2 1357 aaKnown RBP38.05■■■■□ 3.68
TNFRSF25-213ENST00000480393 RIMS2Q9UQ26 1411 aa38.02■■■■□ 3.68
TNFRSF25-213ENST00000480393 PANK3Q9H999 370 aa38.01■■■■□ 3.68
TNFRSF25-213ENST00000480393 QRICH2Q9H0J4 1663 aa38.01■■■■□ 3.68
TNFRSF25-213ENST00000480393 CCDC184Q52MB2 194 aa38.01■■■■□ 3.67
TNFRSF25-213ENST00000480393 SCAF1Q9H7N4 1312 aaKnown RBP37.98■■■■□ 3.67
TNFRSF25-213ENST00000480393 RALBP1Q15311 655 aa37.98■■■■□ 3.67
TNFRSF25-213ENST00000480393 ASXL1Q8IXJ9 1541 aa37.96■■■■□ 3.67
TNFRSF25-213ENST00000480393 ARHGEF28Q8N1W1 1705 aaKnown RBP37.96■■■■□ 3.67
TNFRSF25-213ENST00000480393 FER1L4A9Z1Z3 1794 aa37.95■■■■□ 3.67
TNFRSF25-213ENST00000480393 PER1O15534 1290 aaPredicted RBP37.95■■■■□ 3.67
TNFRSF25-213ENST00000480393 SENP3Q9H4L4 574 aaPredicted RBP37.95■■■■□ 3.67
TNFRSF25-213ENST00000480393 MYOM1P52179 1685 aa37.94■■■■□ 3.66
TNFRSF25-213ENST00000480393 ALKQ9UM73 1620 aa37.93■■■■□ 3.66
TNFRSF25-213ENST00000480393 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.9■■■■□ 3.66
TNFRSF25-213ENST00000480393 MYBBP1AQ9BQG0 1328 aaKnown RBP37.9■■■■□ 3.66
TNFRSF25-213ENST00000480393 GTF3C3Q9Y5Q9 886 aa37.87■■■■□ 3.65
TNFRSF25-213ENST00000480393 C3P01024 1663 aa37.87■■■■□ 3.65
TNFRSF25-213ENST00000480393 PARD3Q8TEW0 1356 aa37.87■■■■□ 3.65
TNFRSF25-213ENST00000480393 FAM9BQ8IZU0 186 aa37.86■■■■□ 3.65
TNFRSF25-213ENST00000480393 NLRP1Q9C000 1473 aa37.86■■■■□ 3.65
TNFRSF25-213ENST00000480393 UBR1Q8IWV7 1749 aa37.85■■■■□ 3.65
TNFRSF25-213ENST00000480393 YTHDC2Q9H6S0 1430 aaKnown RBP37.85■■■■□ 3.65
TNFRSF25-213ENST00000480393 STK26Q9P289 416 aa37.84■■■■□ 3.65
TNFRSF25-213ENST00000480393 HDGFP51858 240 aaKnown RBP37.84■■■■□ 3.65
TNFRSF25-213ENST00000480393 KNSTRNQ9Y448 316 aa37.83■■■■□ 3.65
TNFRSF25-213ENST00000480393 CEBPAP49715 358 aaPredicted RBP37.82■■■■□ 3.65
TNFRSF25-213ENST00000480393 HNRNPUQ00839 825 aaKnown RBP eCLIP37.82■■■■□ 3.65
TNFRSF25-213ENST00000480393 CC2D1BQ5T0F9 858 aaKnown RBP37.81■■■■□ 3.64
TNFRSF25-213ENST00000480393 BRD4O60885 1362 aaPredicted RBP37.8■■■■□ 3.64
TNFRSF25-213ENST00000480393 TMC1Q8TDI8 760 aa37.79■■■■□ 3.64
TNFRSF25-213ENST00000480393 PTPRMP28827 1452 aa37.77■■■■□ 3.64
TNFRSF25-213ENST00000480393 EVC2Q86UK5 1308 aa37.77■■■■□ 3.64
TNFRSF25-213ENST00000480393 TMEM2Q9UHN6 1383 aa37.76■■■■□ 3.64
TNFRSF25-213ENST00000480393 SETD1AO15047 1707 aaKnown RBP37.74■■■■□ 3.63
TNFRSF25-213ENST00000480393 PLPPR3Q6T4P5 718 aa37.74■■■■□ 3.63
TNFRSF25-213ENST00000480393 TULP4Q9NRJ4 1543 aa37.73■■■■□ 3.63
TNFRSF25-213ENST00000480393 NLRP13Q86W25 1043 aa37.73■■■■□ 3.63
TNFRSF25-213ENST00000480393 NRXN3Q9Y4C0 1643 aa37.73■■■■□ 3.63
TNFRSF25-213ENST00000480393 SAFB2Q14151 953 aaKnown RBP eCLIP37.71■■■■□ 3.63
TNFRSF25-213ENST00000480393 POGKQ9P215 609 aa37.71■■■■□ 3.63
TNFRSF25-213ENST00000480393 LRPPRCP42704 1394 aaKnown RBP37.69■■■■□ 3.62
TNFRSF25-213ENST00000480393 PUS7Q96PZ0 661 aaKnown RBP37.69■■■■□ 3.62
TNFRSF25-213ENST00000480393 PRAM1Q96QH2 718 aa37.69■■■■□ 3.62
TNFRSF25-213ENST00000480393 DLC1Q96QB1 1528 aa37.68■■■■□ 3.62
TNFRSF25-213ENST00000480393 AMER1Q5JTC6 1135 aaPredicted RBP37.67■■■■□ 3.62
TNFRSF25-213ENST00000480393 NPC1L1Q9UHC9 1359 aa37.65■■■■□ 3.62
TNFRSF25-213ENST00000480393 BCANQ96GW7 911 aa37.64■■■■□ 3.62
TNFRSF25-213ENST00000480393 RIMS1Q86UR5 1692 aaKnown RBP37.62■■■■□ 3.61
TNFRSF25-213ENST00000480393 PNISRQ8TF01 805 aaKnown RBP37.62■■■■□ 3.61
TNFRSF25-213ENST00000480393 MINK1Q8N4C8 1332 aaPredicted RBP37.6■■■■□ 3.61
TNFRSF25-213ENST00000480393 ABCC11Q96J66 1382 aa37.59■■■■□ 3.61
TNFRSF25-213ENST00000480393 METP08581 1390 aa37.57■■■■□ 3.61
TNFRSF25-213ENST00000480393 PLEKHG1Q9ULL1 1385 aa37.57■■■■□ 3.61
TNFRSF25-213ENST00000480393 CABP2Q9NPB3 220 aa37.56■■■■□ 3.6
TNFRSF25-213ENST00000480393 EID1Q9Y6B2 187 aa37.56■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms