RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 ELL2O00472 640 aaPredicted RBP15.26■□□□□ 0.03
PTPRE-208ENST00000479896 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
PTPRE-208ENST00000479896 APPP05067 770 aa15.26■□□□□ 0.03
PTPRE-208ENST00000479896 IFIT2P09913 472 aaKnown RBP15.25■□□□□ 0.03
PTPRE-208ENST00000479896 ANKRD45Q5TZF3 282 aa15.25■□□□□ 0.03
PTPRE-208ENST00000479896 CCDC43Q96MW1 224 aaKnown RBP15.24■□□□□ 0.03
PTPRE-208ENST00000479896 E9PSI1 815 aa15.24■□□□□ 0.03
PTPRE-208ENST00000479896 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
PTPRE-208ENST00000479896 DIAPH1O60610 1272 aaKnown RBP15.24■□□□□ 0.03
PTPRE-208ENST00000479896 TRDNQ13061 729 aa15.23■□□□□ 0.03
PTPRE-208ENST00000479896 ERICH2A1L162 156 aa15.23■□□□□ 0.03
PTPRE-208ENST00000479896 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
PTPRE-208ENST00000479896 MCTP1Q6DN14 999 aa15.23■□□□□ 0.03
PTPRE-208ENST00000479896 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
PTPRE-208ENST00000479896 RAPGEF4Q8WZA2 1011 aa15.23■□□□□ 0.03
PTPRE-208ENST00000479896 WWC1Q8IX03 1113 aa15.23■□□□□ 0.03
PTPRE-208ENST00000479896 ANO8Q9HCE9 1232 aaPredicted RBP15.23■□□□□ 0.03
PTPRE-208ENST00000479896 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
PTPRE-208ENST00000479896 ROCK1Q13464 1354 aa15.22■□□□□ 0.03
PTPRE-208ENST00000479896 GOLGA6L19H0YKK7 550 aa15.22■□□□□ 0.03
PTPRE-208ENST00000479896 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
PTPRE-208ENST00000479896 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTPRE-208ENST00000479896 DEKP35659 375 aaKnown RBP15.22■□□□□ 0.03
PTPRE-208ENST00000479896 CPLX1O14810 134 aa15.21■□□□□ 0.03
PTPRE-208ENST00000479896 ST20-MTHFSA0A0A6YYL1 179 aa15.21■□□□□ 0.03
PTPRE-208ENST00000479896 CCDC70Q6NSX1 233 aa15.21■□□□□ 0.03
PTPRE-208ENST00000479896 DDX11L8A8MPP1 907 aa15.21■□□□□ 0.03
PTPRE-208ENST00000479896 ANKRD20A12PQ8NF67 263 aa15.2■□□□□ 0.02
PTPRE-208ENST00000479896 RBM19Q9Y4C8 960 aaKnown RBP15.2■□□□□ 0.02
PTPRE-208ENST00000479896 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
PTPRE-208ENST00000479896 PCMTD1Q96MG8 357 aaPredicted RBP15.2■□□□□ 0.02
PTPRE-208ENST00000479896 BECN2A8MW95 431 aa15.2■□□□□ 0.02
PTPRE-208ENST00000479896 NFXL1Q6ZNB6 911 aa15.2■□□□□ 0.02
PTPRE-208ENST00000479896 API5Q9BZZ5 524 aaKnown RBP15.2■□□□□ 0.02
PTPRE-208ENST00000479896 ANO2Q9NQ90 1003 aa15.2■□□□□ 0.02
PTPRE-208ENST00000479896 HOOK1Q9UJC3 728 aaKnown RBP15.19■□□□□ 0.02
PTPRE-208ENST00000479896 RNF20Q5VTR2 975 aa15.19■□□□□ 0.02
PTPRE-208ENST00000479896 CENPQQ7L2Z9 268 aaPredicted RBP15.18■□□□□ 0.02
PTPRE-208ENST00000479896 NECTIN2Q92692 538 aa15.17■□□□□ 0.02
PTPRE-208ENST00000479896 REC8O95072 547 aa15.17■□□□□ 0.02
PTPRE-208ENST00000479896 HSP90AB4PQ58FF6 505 aa15.17■□□□□ 0.02
PTPRE-208ENST00000479896 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
PTPRE-208ENST00000479896 IPO7O95373 1038 aaKnown RBP15.16■□□□□ 0.02
PTPRE-208ENST00000479896 FKBP5Q13451 457 aaPredicted RBP15.16■□□□□ 0.02
PTPRE-208ENST00000479896 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
PTPRE-208ENST00000479896 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
PTPRE-208ENST00000479896 NLRP2Q9NX02 1062 aa15.15■□□□□ 0.02
PTPRE-208ENST00000479896 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
PTPRE-208ENST00000479896 RIPK4P57078 832 aa15.15■□□□□ 0.02
PTPRE-208ENST00000479896 MIA2Q96PC5 1412 aa15.15■□□□□ 0.02
PTPRE-208ENST00000479896 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
PTPRE-208ENST00000479896 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
PTPRE-208ENST00000479896 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
PTPRE-208ENST00000479896 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
PTPRE-208ENST00000479896 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
PTPRE-208ENST00000479896 ARID3AQ99856 593 aa15.14■□□□□ 0.01
PTPRE-208ENST00000479896 ERC2O15083 957 aa15.13■□□□□ 0.01
PTPRE-208ENST00000479896 R3HCC1Q9Y3T6 440 aaKnown RBP15.13■□□□□ 0.01
PTPRE-208ENST00000479896 SKOR2Q2VWA4 1001 aaPredicted RBP15.13■□□□□ 0.01
PTPRE-208ENST00000479896 SF3B2Q13435 895 aaKnown RBP15.12■□□□□ 0.01
PTPRE-208ENST00000479896 SAFBQ15424 915 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPRE-208ENST00000479896 CCDC27Q2M243 656 aa15.12■□□□□ 0.01
PTPRE-208ENST00000479896 CCAR2Q8N163 923 aaKnown RBP15.12■□□□□ 0.01
PTPRE-208ENST00000479896 GPRASP1Q5JY77 1395 aa15.12■□□□□ 0.01
PTPRE-208ENST00000479896 GNAI1P63096 354 aa15.12■□□□□ 0.01
PTPRE-208ENST00000479896 USP47Q96K76 1375 aa15.11■□□□□ 0.01
PTPRE-208ENST00000479896 FAM161AQ3B820 660 aa15.1■□□□□ 0.01
PTPRE-208ENST00000479896 BRMS1Q9HCU9 246 aa15.1■□□□□ 0.01
PTPRE-208ENST00000479896 DDX49Q9Y6V7 483 aaKnown RBP15.1■□□□□ 0.01
PTPRE-208ENST00000479896 FYB1O15117 783 aa15.1■□□□□ 0.01
PTPRE-208ENST00000479896 GPS2Q13227 327 aa15.1■□□□□ 0.01
PTPRE-208ENST00000479896 RALYLQ86SE5 291 aaKnown RBP15.09■□□□□ 0.01
PTPRE-208ENST00000479896 NEUROD6Q96NK8 337 aa15.09■□□□□ 0.01
PTPRE-208ENST00000479896 STAC3Q96MF2 364 aa15.09■□□□□ 0.01
PTPRE-208ENST00000479896 DZIP1LQ8IYY4 767 aaKnown RBP15.09■□□□□ 0.01
PTPRE-208ENST00000479896 WASHC4Q2M389 1173 aa15.08■□□□□ 0.01
PTPRE-208ENST00000479896 FOXD4L6Q3SYB3 417 aaPredicted RBP15.08■□□□□ 0.01
PTPRE-208ENST00000479896 FOXD4L3Q6VB84 417 aaPredicted RBP15.08■□□□□ 0.01
PTPRE-208ENST00000479896 KIF6Q6ZMV9 814 aa15.08■□□□□ 0.01
PTPRE-208ENST00000479896 RUNDC1Q96C34 613 aa15.08■□□□□ 0.01
PTPRE-208ENST00000479896 COG6Q9Y2V7 657 aa15.08■□□□□ 0.01
PTPRE-208ENST00000479896 SETQ01105 290 aaPredicted RBP15.08■□□□□ 0
PTPRE-208ENST00000479896 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0
PTPRE-208ENST00000479896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.08■□□□□ 0
PTPRE-208ENST00000479896 APAF1O14727 1248 aa15.07■□□□□ 0
PTPRE-208ENST00000479896 CCAR1Q8IX12 1150 aaKnown RBP15.07■□□□□ 0
PTPRE-208ENST00000479896 BICD2Q8TD16 824 aa15.07■□□□□ 0
PTPRE-208ENST00000479896 IKQ13123 557 aaPredicted RBP15.07■□□□□ 0
PTPRE-208ENST00000479896 CT47A1Q5JQC4 288 aaPredicted RBP15.07■□□□□ 0
PTPRE-208ENST00000479896 XBP1P17861 261 aa15.07■□□□□ 0
PTPRE-208ENST00000479896 ODF2Q5BJF6 829 aa15.06■□□□□ 0
PTPRE-208ENST00000479896 WWC2Q6AWC2 1192 aa15.06■□□□□ 0
PTPRE-208ENST00000479896 RRP1P56182 461 aaKnown RBP15.06■□□□□ 0
PTPRE-208ENST00000479896 INTS3Q68E01 1043 aaKnown RBP15.06■□□□□ 0
PTPRE-208ENST00000479896 NLRP6P59044 892 aa15.05■□□□□ 0
PTPRE-208ENST00000479896 TBC1D2BQ9UPU7 963 aa15.05■□□□□ 0
PTPRE-208ENST00000479896 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ 0
PTPRE-208ENST00000479896 MYOM3Q5VTT5 1437 aa15.05■□□□□ -0
PTPRE-208ENST00000479896 NUTM2GQ5VZR2 741 aa15.05■□□□□ -0
PTPRE-208ENST00000479896 NINLQ9Y2I6 1382 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms