RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 CDK12Q9NYV4 1490 aaPredicted RBP24.55■■□□□ 1.52
HDLBP-238ENST00000479894 AHDC1Q5TGY3 1603 aaPredicted RBP24.54■■□□□ 1.52
HDLBP-238ENST00000479894 MEX3CQ5U5Q3 659 aaKnown RBP24.54■■□□□ 1.52
HDLBP-238ENST00000479894 TRIM52Q96A61 297 aa24.53■■□□□ 1.52
HDLBP-238ENST00000479894 NOS1P29475 1434 aa24.52■■□□□ 1.52
HDLBP-238ENST00000479894 RXRBP28702 533 aa24.5■■□□□ 1.51
HDLBP-238ENST00000479894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.5■■□□□ 1.512e-12■□□□□ 10.4
HDLBP-238ENST00000479894 SLC52A1Q9NWF4 448 aa24.49■■□□□ 1.51
HDLBP-238ENST00000479894 PLEKHG1Q9ULL1 1385 aa24.48■■□□□ 1.51
HDLBP-238ENST00000479894 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
HDLBP-238ENST00000479894 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.47■■□□□ 1.51
HDLBP-238ENST00000479894 BCANQ96GW7 911 aa24.47■■□□□ 1.51
HDLBP-238ENST00000479894 RRP7BPQ9NSQ0 103 aa24.46■■□□□ 1.51
HDLBP-238ENST00000479894 ABCC5O15440 1437 aa24.45■■□□□ 1.51
HDLBP-238ENST00000479894 ZFYVE9O95405 1425 aa24.45■■□□□ 1.51
HDLBP-238ENST00000479894 CADPS2Q86UW7 1296 aa24.44■■□□□ 1.5
HDLBP-238ENST00000479894 DIP2AQ14689 1571 aa24.43■■□□□ 1.5
HDLBP-238ENST00000479894 HDGFP51858 240 aaKnown RBP24.42■■□□□ 1.5
HDLBP-238ENST00000479894 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
HDLBP-238ENST00000479894 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
HDLBP-238ENST00000479894 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
HDLBP-238ENST00000479894 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.5
HDLBP-238ENST00000479894 RPRD2Q5VT52 1461 aaKnown RBP24.39■■□□□ 1.5
HDLBP-238ENST00000479894 C19orf44Q9H6X5 657 aa24.39■■□□□ 1.49
HDLBP-238ENST00000479894 DAPK1P53355 1430 aa24.38■■□□□ 1.49
HDLBP-238ENST00000479894 RIMS2Q9UQ26 1411 aa24.37■■□□□ 1.49
HDLBP-238ENST00000479894 TMEM131LA2VDJ0 1609 aa24.37■■□□□ 1.49
HDLBP-238ENST00000479894 ATF3P18847 181 aa24.37■■□□□ 1.49
HDLBP-238ENST00000479894 C14orf37Q86TY3 774 aa24.37■■□□□ 1.49
HDLBP-238ENST00000479894 SRCAPQ6ZRS2 3230 aa24.37■■□□□ 1.49
HDLBP-238ENST00000479894 PIK3R4Q99570 1358 aa24.37■■□□□ 1.49
HDLBP-238ENST00000479894 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
HDLBP-238ENST00000479894 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
HDLBP-238ENST00000479894 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
HDLBP-238ENST00000479894 LOC105371045A0A1W2PR82 267 aa24.34■■□□□ 1.49
HDLBP-238ENST00000479894 AFF2P51816 1311 aa24.34■■□□□ 1.49
HDLBP-238ENST00000479894 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.32■■□□□ 1.48
HDLBP-238ENST00000479894 SETD5Q9C0A6 1442 aa24.32■■□□□ 1.48
HDLBP-238ENST00000479894 RGS12O14924 1447 aa24.31■■□□□ 1.48
HDLBP-238ENST00000479894 DCCP43146 1447 aa24.31■■□□□ 1.48
HDLBP-238ENST00000479894 BRINP3Q76B58 766 aa24.31■■□□□ 1.48
HDLBP-238ENST00000479894 ADAMTS13Q76LX8 1427 aa24.31■■□□□ 1.48
HDLBP-238ENST00000479894 NHSL1Q5SYE7 1610 aa24.31■■□□□ 1.48
HDLBP-238ENST00000479894 NUTM2BA6NNL0 878 aaPredicted RBP24.3■■□□□ 1.48
HDLBP-238ENST00000479894 NUTM2EB1AL46 878 aaPredicted RBP24.3■■□□□ 1.48
HDLBP-238ENST00000479894 NUTM2AQ8IVF1 878 aaPredicted RBP24.3■■□□□ 1.48
HDLBP-238ENST00000479894 RBM6P78332 1123 aaKnown RBP24.29■■□□□ 1.48
HDLBP-238ENST00000479894 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
HDLBP-238ENST00000479894 TRPM2O94759 1503 aa24.26■■□□□ 1.47
HDLBP-238ENST00000479894 FOXD1Q16676 465 aa24.24■■□□□ 1.47
HDLBP-238ENST00000479894 QTRT2Q9H974 415 aaKnown RBP24.24■■□□□ 1.47
HDLBP-238ENST00000479894 LRRC59Q96AG4 307 aaKnown RBP24.23■■□□□ 1.47
HDLBP-238ENST00000479894 ADGRL2O95490 1459 aa24.23■■□□□ 1.47
HDLBP-238ENST00000479894 CHIC2Q9UKJ5 165 aa24.21■■□□□ 1.47
HDLBP-238ENST00000479894 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
HDLBP-238ENST00000479894 NUTM2DQ5VT03 806 aaPredicted RBP24.19■■□□□ 1.46
HDLBP-238ENST00000479894 NGLY1Q96IV0 654 aa24.19■■□□□ 1.46
HDLBP-238ENST00000479894 C8orf37Q96NL8 207 aa24.19■■□□□ 1.46
HDLBP-238ENST00000479894 AMOTL2Q9Y2J4 779 aa24.19■■□□□ 1.46
HDLBP-238ENST00000479894 MST1RQ04912 1400 aa24.18■■□□□ 1.46
HDLBP-238ENST00000479894 XRN1Q8IZH2 1706 aaKnown RBP24.18■■□□□ 1.46
HDLBP-238ENST00000479894 UNC13BO14795 1591 aa24.18■■□□□ 1.46
HDLBP-238ENST00000479894 PTPRUQ92729 1446 aa24.18■■□□□ 1.46
HDLBP-238ENST00000479894 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
HDLBP-238ENST00000479894 ANKRD50Q9ULJ7 1429 aa24.16■■□□□ 1.46
HDLBP-238ENST00000479894 ZRANB1Q9UGI0 708 aa24.15■■□□□ 1.46
HDLBP-238ENST00000479894 CHGAP10645 457 aaKnown RBP24.14■■□□□ 1.45
HDLBP-238ENST00000479894 E9PCH4 1651 aa24.14■■□□□ 1.45
HDLBP-238ENST00000479894 LAMC1P11047 1609 aa24.11■■□□□ 1.45
HDLBP-238ENST00000479894 NRXN3Q9Y4C0 1643 aa24.1■■□□□ 1.45
HDLBP-238ENST00000479894 SETBP1Q9Y6X0 1596 aa24.09■■□□□ 1.45
HDLBP-238ENST00000479894 EP400Q96L91 3159 aa24.07■■□□□ 1.44
HDLBP-238ENST00000479894 CCDC125Q86Z20 511 aa24.07■■□□□ 1.44
HDLBP-238ENST00000479894 TRPC5Q9UL62 973 aaPredicted RBP24.07■■□□□ 1.44
HDLBP-238ENST00000479894 IQGAP3Q86VI3 1631 aa24.06■■□□□ 1.44
HDLBP-238ENST00000479894 ADGRL3Q9HAR2 1447 aa24.06■■□□□ 1.44
HDLBP-238ENST00000479894 NALCNQ8IZF0 1738 aa24.05■■□□□ 1.44
HDLBP-238ENST00000479894 PTCH1Q13635 1447 aa24.03■■□□□ 1.44
HDLBP-238ENST00000479894 ADAMTS2O95450 1211 aa24.03■■□□□ 1.44
HDLBP-238ENST00000479894 APLP2Q06481 763 aa24.03■■□□□ 1.44
HDLBP-238ENST00000479894 USP21Q9UK80 565 aa24.03■■□□□ 1.44
HDLBP-238ENST00000479894 FNBP4Q8N3X1 1017 aaPredicted RBP24.02■■□□□ 1.44
HDLBP-238ENST00000479894 DDX17Q92841 729 aaKnown RBP24.02■■□□□ 1.44
HDLBP-238ENST00000479894 ATRNO75882 1429 aa24.01■■□□□ 1.43
HDLBP-238ENST00000479894 COL22A1Q8NFW1 1626 aaPredicted RBP23.99■■□□□ 1.43
HDLBP-238ENST00000479894 C1orf167Q5SNV9 1468 aa23.99■■□□□ 1.43
HDLBP-238ENST00000479894 SOS2Q07890 1332 aaPredicted RBP23.98■■□□□ 1.43
HDLBP-238ENST00000479894 METP08581 1390 aa23.97■■□□□ 1.43
HDLBP-238ENST00000479894 MARF1Q9Y4F3 1742 aaKnown RBP23.97■■□□□ 1.43
HDLBP-238ENST00000479894 SPHKAPQ2M3C7 1700 aa23.92■■□□□ 1.42
HDLBP-238ENST00000479894 LRP5O75197 1615 aa23.9■■□□□ 1.42
HDLBP-238ENST00000479894 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.9■■□□□ 1.42
HDLBP-238ENST00000479894 FAM50AQ14320 339 aaKnown RBP23.89■■□□□ 1.41
HDLBP-238ENST00000479894 MYOM2P54296 1465 aa23.88■■□□□ 1.41
HDLBP-238ENST00000479894 BCL9LQ86UU0 1499 aa23.87■■□□□ 1.41
HDLBP-238ENST00000479894 ORAI2Q96SN7 254 aa23.86■■□□□ 1.41
HDLBP-238ENST00000479894 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
HDLBP-238ENST00000479894 BLMP54132 1417 aaPredicted RBP23.85■■□□□ 1.41
HDLBP-238ENST00000479894 NEXMIFQ5QGS0 1516 aa23.85■■□□□ 1.41
HDLBP-238ENST00000479894 GJD4Q96KN9 370 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms