RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
CLDN18-203ENST00000479660 ESF1Q9H501 851 aaKnown RBP20.03■□□□□ 0.8
CLDN18-203ENST00000479660 IFT172Q9UG01 1749 aa20.03■□□□□ 0.8
CLDN18-203ENST00000479660 CLTCQ00610 1675 aaKnown RBP20.03■□□□□ 0.8
CLDN18-203ENST00000479660 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
CLDN18-203ENST00000479660 CFAP70Q5T0N1 1121 aa20.01■□□□□ 0.79
CLDN18-203ENST00000479660 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
CLDN18-203ENST00000479660 NRXN1Q9ULB1 1477 aa20■□□□□ 0.79
CLDN18-203ENST00000479660 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
CLDN18-203ENST00000479660 PPLO60437 1756 aa19.98■□□□□ 0.79
CLDN18-203ENST00000479660 TESK2Q96S53 571 aa19.97■□□□□ 0.79
CLDN18-203ENST00000479660 SCAF11Q99590 1463 aaKnown RBP19.96■□□□□ 0.79
CLDN18-203ENST00000479660 ZMYM3Q14202 1370 aa19.96■□□□□ 0.79
CLDN18-203ENST00000479660 VGFO15240 615 aaPredicted RBP19.96■□□□□ 0.79
CLDN18-203ENST00000479660 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
CLDN18-203ENST00000479660 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
CLDN18-203ENST00000479660 PIK3C2GO75747 1445 aa19.94■□□□□ 0.78
CLDN18-203ENST00000479660 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
CLDN18-203ENST00000479660 SPATA31D1Q6ZQQ2 1576 aa19.94■□□□□ 0.78
CLDN18-203ENST00000479660 IQGAP1P46940 1657 aa19.94■□□□□ 0.78
CLDN18-203ENST00000479660 C14orf93Q9H972 538 aaKnown RBP19.93■□□□□ 0.78
CLDN18-203ENST00000479660 STAG3Q9UJ98 1225 aa19.93■□□□□ 0.78
CLDN18-203ENST00000479660 NEXMIFQ5QGS0 1516 aa19.93■□□□□ 0.78
CLDN18-203ENST00000479660 TMEM131LA2VDJ0 1609 aa19.93■□□□□ 0.78
CLDN18-203ENST00000479660 TMF1P82094 1093 aa19.92■□□□□ 0.78
CLDN18-203ENST00000479660 EIF3AQ14152 1382 aaKnown RBP19.91■□□□□ 0.78
CLDN18-203ENST00000479660 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
CLDN18-203ENST00000479660 DISP3Q9P2K9 1392 aa19.89■□□□□ 0.77
CLDN18-203ENST00000479660 ZFYVE9O95405 1425 aa19.89■□□□□ 0.77
CLDN18-203ENST00000479660 SETBP1Q9Y6X0 1596 aa19.88■□□□□ 0.77
CLDN18-203ENST00000479660 PRKRIP1Q9H875 184 aaPredicted RBP19.88■□□□□ 0.77
CLDN18-203ENST00000479660 TMEM132EQ6IEE7 984 aa19.85■□□□□ 0.77
CLDN18-203ENST00000479660 A2ML1A8K2U0 1454 aa19.83■□□□□ 0.77
CLDN18-203ENST00000479660 ADGRB1O14514 1584 aa19.83■□□□□ 0.76
CLDN18-203ENST00000479660 TNRQ92752 1358 aa19.83■□□□□ 0.76
CLDN18-203ENST00000479660 SLC24A1O60721 1099 aa19.83■□□□□ 0.76
CLDN18-203ENST00000479660 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
CLDN18-203ENST00000479660 TRAK1Q9UPV9 953 aa19.82■□□□□ 0.76
CLDN18-203ENST00000479660 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
CLDN18-203ENST00000479660 CEBPAP49715 358 aaPredicted RBP19.79■□□□□ 0.76
CLDN18-203ENST00000479660 CENPJQ9HC77 1338 aaPredicted RBP19.79■□□□□ 0.76
CLDN18-203ENST00000479660 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
CLDN18-203ENST00000479660 RIMS2Q9UQ26 1411 aa19.77■□□□□ 0.76
CLDN18-203ENST00000479660 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
CLDN18-203ENST00000479660 PANK3Q9H999 370 aa19.75■□□□□ 0.75
CLDN18-203ENST00000479660 SBNO2Q9Y2G9 1366 aa19.75■□□□□ 0.75
CLDN18-203ENST00000479660 FER1L4A9Z1Z3 1794 aa19.74■□□□□ 0.75
CLDN18-203ENST00000479660 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
CLDN18-203ENST00000479660 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.74■□□□□ 0.75
CLDN18-203ENST00000479660 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
CLDN18-203ENST00000479660 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
CLDN18-203ENST00000479660 CCDC184Q52MB2 194 aa19.72■□□□□ 0.75
CLDN18-203ENST00000479660 C3P01024 1663 aa19.72■□□□□ 0.75
CLDN18-203ENST00000479660 STK26Q9P289 416 aa19.71■□□□□ 0.75
CLDN18-203ENST00000479660 ALKQ9UM73 1620 aa19.71■□□□□ 0.75
CLDN18-203ENST00000479660 ASXL1Q8IXJ9 1541 aa19.7■□□□□ 0.74
CLDN18-203ENST00000479660 NLRP1Q9C000 1473 aa19.7■□□□□ 0.74
CLDN18-203ENST00000479660 MRS2Q9HD23 443 aa19.7■□□□□ 0.74
CLDN18-203ENST00000479660 KDM5AP29375 1690 aaKnown RBP19.69■□□□□ 0.74
CLDN18-203ENST00000479660 RALBP1Q15311 655 aa19.68■□□□□ 0.74
CLDN18-203ENST00000479660 KTN1Q86UP2 1357 aaKnown RBP19.68■□□□□ 0.74
CLDN18-203ENST00000479660 TMEM2Q9UHN6 1383 aa19.68■□□□□ 0.74
CLDN18-203ENST00000479660 UBR1Q8IWV7 1749 aa19.68■□□□□ 0.74
CLDN18-203ENST00000479660 QRICH2Q9H0J4 1663 aa19.68■□□□□ 0.74
CLDN18-203ENST00000479660 YTHDC2Q9H6S0 1430 aaKnown RBP19.68■□□□□ 0.74
CLDN18-203ENST00000479660 ARHGEF28Q8N1W1 1705 aaKnown RBP19.68■□□□□ 0.74
CLDN18-203ENST00000479660 SAFB2Q14151 953 aaKnown RBP eCLIP19.64■□□□□ 0.74
CLDN18-203ENST00000479660 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.74
CLDN18-203ENST00000479660 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
CLDN18-203ENST00000479660 PTPRMP28827 1452 aa19.63■□□□□ 0.73
CLDN18-203ENST00000479660 EVC2Q86UK5 1308 aa19.63■□□□□ 0.73
CLDN18-203ENST00000479660 MYOM1P52179 1685 aa19.63■□□□□ 0.73
CLDN18-203ENST00000479660 BCANQ96GW7 911 aa19.63■□□□□ 0.73
CLDN18-203ENST00000479660 PRAM1Q96QH2 718 aa19.63■□□□□ 0.73
CLDN18-203ENST00000479660 POGKQ9P215 609 aa19.63■□□□□ 0.73
CLDN18-203ENST00000479660 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
CLDN18-203ENST00000479660 PARD3Q8TEW0 1356 aa19.62■□□□□ 0.73
CLDN18-203ENST00000479660 FAM9BQ8IZU0 186 aa19.61■□□□□ 0.73
CLDN18-203ENST00000479660 NRXN3Q9Y4C0 1643 aa19.6■□□□□ 0.73
CLDN18-203ENST00000479660 TXNDC2Q86VQ3 553 aa19.6■□□□□ 0.73
CLDN18-203ENST00000479660 SETD1AO15047 1707 aaKnown RBP19.6■□□□□ 0.73
CLDN18-203ENST00000479660 LTKP29376 864 aa19.59■□□□□ 0.73
CLDN18-203ENST00000479660 TMC1Q8TDI8 760 aa19.59■□□□□ 0.73
CLDN18-203ENST00000479660 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
CLDN18-203ENST00000479660 LRPPRCP42704 1394 aaKnown RBP19.59■□□□□ 0.73
CLDN18-203ENST00000479660 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
CLDN18-203ENST00000479660 EID1Q9Y6B2 187 aa19.59■□□□□ 0.73
CLDN18-203ENST00000479660 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.73
CLDN18-203ENST00000479660 METP08581 1390 aa19.58■□□□□ 0.72
CLDN18-203ENST00000479660 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
CLDN18-203ENST00000479660 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
CLDN18-203ENST00000479660 TULP4Q9NRJ4 1543 aa19.57■□□□□ 0.72
CLDN18-203ENST00000479660 MINK1Q8N4C8 1332 aaPredicted RBP19.56■□□□□ 0.72
CLDN18-203ENST00000479660 HNRNPUQ00839 825 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLDN18-203ENST00000479660 BRD4O60885 1362 aaPredicted RBP19.56■□□□□ 0.72
CLDN18-203ENST00000479660 NLRP13Q86W25 1043 aa19.56■□□□□ 0.72
CLDN18-203ENST00000479660 SLC12A5Q9H2X9 1139 aa19.56■□□□□ 0.72
CLDN18-203ENST00000479660 CABP2Q9NPB3 220 aa19.56■□□□□ 0.72
CLDN18-203ENST00000479660 ADAMTSL3P82987 1691 aa19.55■□□□□ 0.72
CLDN18-203ENST00000479660 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms