RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
BRAF-203ENST00000479537 MYSM1Q5VVJ2 828 aa10.62□□□□□ -0.71
BRAF-203ENST00000479537 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
BRAF-203ENST00000479537 PBX2P40425 430 aa10.61□□□□□ -0.71
BRAF-203ENST00000479537 DMRTA1Q5VZB9 504 aa10.61□□□□□ -0.71
BRAF-203ENST00000479537 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
BRAF-203ENST00000479537 SMAPO00193 183 aa10.6□□□□□ -0.71
BRAF-203ENST00000479537 CLK2P49760 499 aaKnown RBP10.6□□□□□ -0.71
BRAF-203ENST00000479537 C3orf80F5H4A9 247 aa10.59□□□□□ -0.71
BRAF-203ENST00000479537 NUTM1Q86Y26 1132 aa10.59□□□□□ -0.71
BRAF-203ENST00000479537 ARXQ96QS3 562 aa10.59□□□□□ -0.71
BRAF-203ENST00000479537 RDH13Q8NBN7 331 aa10.58□□□□□ -0.72
BRAF-203ENST00000479537 CD46P15529 392 aa10.57□□□□□ -0.72
BRAF-203ENST00000479537 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
BRAF-203ENST00000479537 TMEM134Q9H6X4 195 aa10.57□□□□□ -0.72
BRAF-203ENST00000479537 KIAA1468Q9P260 1216 aa10.57□□□□□ -0.72
BRAF-203ENST00000479537 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
BRAF-203ENST00000479537 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
BRAF-203ENST00000479537 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
BRAF-203ENST00000479537 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
BRAF-203ENST00000479537 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
BRAF-203ENST00000479537 LSM11P83369 360 aaKnown RBP eCLIP10.54□□□□□ -0.72
BRAF-203ENST00000479537 RIC3Q7Z5B4 369 aa10.54□□□□□ -0.72
BRAF-203ENST00000479537 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
BRAF-203ENST00000479537 MCM6Q14566 821 aa10.52□□□□□ -0.73
BRAF-203ENST00000479537 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
BRAF-203ENST00000479537 HOMEZQ8IX15 550 aa10.52□□□□□ -0.73
BRAF-203ENST00000479537 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.52□□□□□ -0.73
BRAF-203ENST00000479537 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
BRAF-203ENST00000479537 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
BRAF-203ENST00000479537 LIMD1Q9UGP4 676 aa10.52□□□□□ -0.73
BRAF-203ENST00000479537 HDGFP51858 240 aaKnown RBP10.51□□□□□ -0.73
BRAF-203ENST00000479537 SEPT9Q9UHD8 586 aaPredicted RBP10.51□□□□□ -0.73
BRAF-203ENST00000479537 VPS9D1Q9Y2B5 631 aa10.51□□□□□ -0.73
BRAF-203ENST00000479537 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
BRAF-203ENST00000479537 SLC4A3P48751 1232 aa10.49□□□□□ -0.73
BRAF-203ENST00000479537 ADGRD1Q6QNK2 874 aa10.49□□□□□ -0.73
BRAF-203ENST00000479537 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
BRAF-203ENST00000479537 MOXD2PA6NHM9 499 aa10.48□□□□□ -0.73
BRAF-203ENST00000479537 RFC5P40937 340 aa10.48□□□□□ -0.73
BRAF-203ENST00000479537 SWT1Q5T5J6 900 aaKnown RBP10.48□□□□□ -0.73
BRAF-203ENST00000479537 SLC4A5Q9BY07 1137 aa10.48□□□□□ -0.73
BRAF-203ENST00000479537 TK2O00142 265 aa10.47□□□□□ -0.73
BRAF-203ENST00000479537 SPTLC1O15269 473 aa10.47□□□□□ -0.73
BRAF-203ENST00000479537 RAD21O60216 631 aa10.47□□□□□ -0.73
BRAF-203ENST00000479537 NDUFV2P19404 249 aa10.47□□□□□ -0.73
BRAF-203ENST00000479537 RSBN1LQ6PCB5 846 aaPredicted RBP10.47□□□□□ -0.73
BRAF-203ENST00000479537 KDM4AO75164 1064 aa10.46□□□□□ -0.73
BRAF-203ENST00000479537 ARID3AQ99856 593 aa10.46□□□□□ -0.73
BRAF-203ENST00000479537 ARID3CA6NKF2 412 aa10.45□□□□□ -0.74
BRAF-203ENST00000479537 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
BRAF-203ENST00000479537 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
BRAF-203ENST00000479537 RNF40O75150 1001 aa10.45□□□□□ -0.74
BRAF-203ENST00000479537 NUTM2DQ5VT03 806 aaPredicted RBP10.45□□□□□ -0.74
BRAF-203ENST00000479537 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
BRAF-203ENST00000479537 SPDYE5A6NIY4 337 aa10.44□□□□□ -0.74
BRAF-203ENST00000479537 A6NJR5 290 aa10.44□□□□□ -0.74
BRAF-203ENST00000479537 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
BRAF-203ENST00000479537 TMEM259Q4ZIN3 620 aa10.44□□□□□ -0.74
BRAF-203ENST00000479537 STAC3Q96MF2 364 aa10.44□□□□□ -0.74
BRAF-203ENST00000479537 APBB1O00213 710 aa10.43□□□□□ -0.74
BRAF-203ENST00000479537 GCGRP47871 477 aa10.43□□□□□ -0.74
BRAF-203ENST00000479537 USP46P62068 366 aa10.43□□□□□ -0.74
BRAF-203ENST00000479537 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
BRAF-203ENST00000479537 NBPF3Q9H094 633 aa10.43□□□□□ -0.74
BRAF-203ENST00000479537 TUSC1Q2TAM9 212 aa10.42□□□□□ -0.74
BRAF-203ENST00000479537 PPP2R2DQ66LE6 453 aa10.42□□□□□ -0.74
BRAF-203ENST00000479537 QPCTQ16769 361 aa10.41□□□□□ -0.74
BRAF-203ENST00000479537 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
BRAF-203ENST00000479537 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
BRAF-203ENST00000479537 BHMG1C9JSJ3 638 aaPredicted RBP10.4□□□□□ -0.74
BRAF-203ENST00000479537 HOXA2O43364 376 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 HRO43593 1189 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 TRAK2O60296 914 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 AP1G2O75843 785 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 SLC10A3P09131 477 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 FDX1P10109 184 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 GJA5P36382 358 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 FBXO31Q5XUX0 539 aaPredicted RBP10.4□□□□□ -0.74
BRAF-203ENST00000479537 SAMD7Q7Z3H4 446 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 PROSER2Q86WR7 435 aaPredicted RBP10.4□□□□□ -0.74
BRAF-203ENST00000479537 MRPL50Q8N5N7 158 aaKnown RBP10.4□□□□□ -0.74
BRAF-203ENST00000479537 POM121Q96HA1 1249 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
BRAF-203ENST00000479537 CABLES1Q8TDN4 633 aa10.39□□□□□ -0.75
BRAF-203ENST00000479537 ZBTB3Q9H5J0 574 aa10.39□□□□□ -0.75
BRAF-203ENST00000479537 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
BRAF-203ENST00000479537 LILRB3O75022 631 aa10.38□□□□□ -0.75
BRAF-203ENST00000479537 C1orf115Q9H7X2 142 aa10.38□□□□□ -0.75
BRAF-203ENST00000479537 CFHP08603 1231 aa10.37□□□□□ -0.75
BRAF-203ENST00000479537 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
BRAF-203ENST00000479537 GRIPAP1Q4V328 841 aa10.37□□□□□ -0.75
BRAF-203ENST00000479537 RTL5Q5HYW3 569 aaPredicted RBP10.37□□□□□ -0.75
BRAF-203ENST00000479537 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
BRAF-203ENST00000479537 GOLGA8CPA6NN73 597 aa10.36□□□□□ -0.75
BRAF-203ENST00000479537 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
BRAF-203ENST00000479537 HRCP23327 699 aa10.35□□□□□ -0.75
BRAF-203ENST00000479537 TSC1Q92574 1164 aa10.35□□□□□ -0.75
BRAF-203ENST00000479537 HLA-CQ95604 372 aa10.35□□□□□ -0.75
BRAF-203ENST00000479537 PRM3Q9NNZ6 103 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms