RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SPRYD3Q8NCJ5 442 aa18.06■□□□□ 0.48
COL20A1-206ENST00000479501 COG3Q96JB2 828 aa18.06■□□□□ 0.48
COL20A1-206ENST00000479501 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
COL20A1-206ENST00000479501 ZKSCAN2Q63HK3 967 aa18.05■□□□□ 0.48
COL20A1-206ENST00000479501 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
COL20A1-206ENST00000479501 CFAP44Q96MT7 982 aa18.05■□□□□ 0.48
COL20A1-206ENST00000479501 AMPHP49418 695 aa18.04■□□□□ 0.48
COL20A1-206ENST00000479501 CABP2Q9NPB3 220 aa18.04■□□□□ 0.48
COL20A1-206ENST00000479501 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
COL20A1-206ENST00000479501 ELL2O00472 640 aaPredicted RBP18.03■□□□□ 0.48
COL20A1-206ENST00000479501 STK31Q9BXU1 1019 aa18.03■□□□□ 0.48
COL20A1-206ENST00000479501 FAM161AQ3B820 660 aa18.03■□□□□ 0.48
COL20A1-206ENST00000479501 SLKQ9H2G2 1235 aaPredicted RBP18.03■□□□□ 0.48
COL20A1-206ENST00000479501 GGNBP2Q9H3C7 697 aa18.02■□□□□ 0.48
COL20A1-206ENST00000479501 ERBINQ96RT1 1412 aa18.02■□□□□ 0.48
COL20A1-206ENST00000479501 KIF14Q15058 1648 aa18.02■□□□□ 0.48
COL20A1-206ENST00000479501 MTHFSP49914 203 aa18.02■□□□□ 0.48
COL20A1-206ENST00000479501 GPATCH8Q9UKJ3 1502 aaKnown RBP18.02■□□□□ 0.48
COL20A1-206ENST00000479501 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
COL20A1-206ENST00000479501 MFAP1P55081 439 aaKnown RBP18.01■□□□□ 0.47
COL20A1-206ENST00000479501 SLC12A5Q9H2X9 1139 aa18■□□□□ 0.47
COL20A1-206ENST00000479501 RIPK4P57078 832 aa18■□□□□ 0.47
COL20A1-206ENST00000479501 PLCB2Q00722 1185 aa18■□□□□ 0.47
COL20A1-206ENST00000479501 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL20A1-206ENST00000479501 RAPGEF3O95398 923 aa17.98■□□□□ 0.47
COL20A1-206ENST00000479501 MSNP26038 577 aaKnown RBP17.98■□□□□ 0.47
COL20A1-206ENST00000479501 NUP153P49790 1475 aaKnown RBP17.97■□□□□ 0.47
COL20A1-206ENST00000479501 TCP11L2Q8N4U5 519 aa17.97■□□□□ 0.47
COL20A1-206ENST00000479501 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
COL20A1-206ENST00000479501 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
COL20A1-206ENST00000479501 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
COL20A1-206ENST00000479501 LTV1Q96GA3 475 aaPredicted RBP17.97■□□□□ 0.47
COL20A1-206ENST00000479501 KCNJ4P48050 445 aa17.96■□□□□ 0.47
COL20A1-206ENST00000479501 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
COL20A1-206ENST00000479501 HMMRO75330 724 aa17.95■□□□□ 0.46
COL20A1-206ENST00000479501 MCCP23508 829 aa17.95■□□□□ 0.46
COL20A1-206ENST00000479501 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
COL20A1-206ENST00000479501 GZF1Q9H116 711 aaPredicted RBP17.95■□□□□ 0.46
COL20A1-206ENST00000479501 SLC52A1Q9NWF4 448 aa17.95■□□□□ 0.46
COL20A1-206ENST00000479501 RAPGEF6Q8TEU7 1601 aa17.93■□□□□ 0.46
COL20A1-206ENST00000479501 USP35Q9P2H5 1018 aa17.93■□□□□ 0.46
COL20A1-206ENST00000479501 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
COL20A1-206ENST00000479501 ATP10BO94823 1461 aa17.93■□□□□ 0.46
COL20A1-206ENST00000479501 CFAP43Q8NDM7 1665 aa17.91■□□□□ 0.46
COL20A1-206ENST00000479501 PRAM1Q96QH2 718 aa17.91■□□□□ 0.46
COL20A1-206ENST00000479501 PANK1Q8TE04 598 aa17.91■□□□□ 0.46
COL20A1-206ENST00000479501 CSB-PGBD3P0DP91 1061 aa17.9■□□□□ 0.46
COL20A1-206ENST00000479501 ZRSR1Q15695 479 aaKnown RBP17.9■□□□□ 0.46
COL20A1-206ENST00000479501 SLC4A3P48751 1232 aa17.9■□□□□ 0.46
COL20A1-206ENST00000479501 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
COL20A1-206ENST00000479501 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.46
COL20A1-206ENST00000479501 HMOX1P09601 288 aa17.89■□□□□ 0.45
COL20A1-206ENST00000479501 ANKRD45Q5TZF3 282 aa17.89■□□□□ 0.45
COL20A1-206ENST00000479501 CDK11BP21127 795 aaKnown RBP17.88■□□□□ 0.45
COL20A1-206ENST00000479501 FGD1P98174 961 aa17.88■□□□□ 0.45
COL20A1-206ENST00000479501 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
COL20A1-206ENST00000479501 KIAA1211Q6ZU35 1233 aa17.86■□□□□ 0.45
COL20A1-206ENST00000479501 GBP4Q96PP9 640 aa17.86■□□□□ 0.45
COL20A1-206ENST00000479501 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
COL20A1-206ENST00000479501 AAMPQ13685 434 aa17.86■□□□□ 0.45
COL20A1-206ENST00000479501 GNAI1P63096 354 aa17.86■□□□□ 0.45
COL20A1-206ENST00000479501 GOLGA6L3A6NEY3 463 aa17.85■□□□□ 0.45
COL20A1-206ENST00000479501 WDR62O43379 1518 aa17.85■□□□□ 0.45
COL20A1-206ENST00000479501 CHAF1AQ13111 956 aaPredicted RBP17.84■□□□□ 0.45
COL20A1-206ENST00000479501 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
COL20A1-206ENST00000479501 ADGRL1O94910 1474 aa17.84■□□□□ 0.45
COL20A1-206ENST00000479501 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.45
COL20A1-206ENST00000479501 KIAA0556O60303 1618 aa17.83■□□□□ 0.44
COL20A1-206ENST00000479501 CD109Q6YHK3 1445 aa17.83■□□□□ 0.44
COL20A1-206ENST00000479501 TRIM6-TRIM34B2RNG4 842 aa17.82■□□□□ 0.44
COL20A1-206ENST00000479501 BCAR3O75815 825 aa17.82■□□□□ 0.44
COL20A1-206ENST00000479501 PDE3AQ14432 1141 aa17.82■□□□□ 0.44
COL20A1-206ENST00000479501 CABP1Q9NZU7 370 aa17.82■□□□□ 0.44
COL20A1-206ENST00000479501 GSE1Q14687 1217 aa17.81■□□□□ 0.44
COL20A1-206ENST00000479501 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
COL20A1-206ENST00000479501 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
COL20A1-206ENST00000479501 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
COL20A1-206ENST00000479501 EXOSC9Q06265 439 aaKnown RBP17.8■□□□□ 0.44
COL20A1-206ENST00000479501 TXNDC2Q86VQ3 553 aa17.79■□□□□ 0.44
COL20A1-206ENST00000479501 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
COL20A1-206ENST00000479501 ARID3AQ99856 593 aa17.78■□□□□ 0.44
COL20A1-206ENST00000479501 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
COL20A1-206ENST00000479501 TEFQ10587 303 aa17.77■□□□□ 0.44
COL20A1-206ENST00000479501 WDR63Q8IWG1 891 aa17.77■□□□□ 0.44
COL20A1-206ENST00000479501 NAP1L2Q9ULW6 460 aaPredicted RBP17.77■□□□□ 0.44
COL20A1-206ENST00000479501 ITSN2Q9NZM3 1697 aa17.77■□□□□ 0.44
COL20A1-206ENST00000479501 FANCAO15360 1455 aa17.77■□□□□ 0.43
COL20A1-206ENST00000479501 NSD3Q9BZ95 1437 aa17.76■□□□□ 0.43
COL20A1-206ENST00000479501 PTMSP20962 102 aa17.76■□□□□ 0.43
COL20A1-206ENST00000479501 SLFN5Q08AF3 891 aa17.76■□□□□ 0.43
COL20A1-206ENST00000479501 HSP90AA2PQ14568 343 aaPredicted RBP17.76■□□□□ 0.43
COL20A1-206ENST00000479501 TSR2Q969E8 191 aaKnown RBP17.76■□□□□ 0.43
COL20A1-206ENST00000479501 PLCH2O75038 1416 aa17.76■□□□□ 0.43
COL20A1-206ENST00000479501 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
COL20A1-206ENST00000479501 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
COL20A1-206ENST00000479501 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
COL20A1-206ENST00000479501 DHX29Q7Z478 1369 aaKnown RBP17.75■□□□□ 0.43
COL20A1-206ENST00000479501 DISP1Q96F81 1524 aa17.75■□□□□ 0.43
COL20A1-206ENST00000479501 ABCA5Q8WWZ7 1642 aa17.75■□□□□ 0.43
COL20A1-206ENST00000479501 DISP3Q9P2K9 1392 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms