RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.54□□□□□ -1.36
COPS7B-220ENST00000479430 SHANK2Q9UPX8 1470 aa6.53□□□□□ -1.36
COPS7B-220ENST00000479430 ADGBQ8N7X0 1667 aa6.53□□□□□ -1.36
COPS7B-220ENST00000479430 TOM1O60784 492 aa6.53□□□□□ -1.36
COPS7B-220ENST00000479430 ZNF644Q9H582 1327 aaPredicted RBP6.52□□□□□ -1.37
COPS7B-220ENST00000479430 ATP7AQ04656 1500 aa6.52□□□□□ -1.37
COPS7B-220ENST00000479430 SPAG9O60271 1321 aaKnown RBP6.51□□□□□ -1.37
COPS7B-220ENST00000479430 BRPF1P55201 1214 aaPredicted RBP6.51□□□□□ -1.37
COPS7B-220ENST00000479430 AKT1S1Q96B36 256 aa6.51□□□□□ -1.37
COPS7B-220ENST00000479430 INO80Q9ULG1 1556 aaPredicted RBP6.51□□□□□ -1.37
COPS7B-220ENST00000479430 IQGAP1P46940 1657 aa6.51□□□□□ -1.37
COPS7B-220ENST00000479430 CLIP1P30622 1438 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 NPATQ14207 1427 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 CNTLNQ9NXG0 1405 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 PLXNC1O60486 1568 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 A2ML1A8K2U0 1454 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 A2MP01023 1474 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 PLA2R1Q13018 1463 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 REM2Q8IYK8 340 aaPredicted RBP6.5□□□□□ -1.37
COPS7B-220ENST00000479430 CEP152O94986 1710 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 LRRC7Q96NW7 1537 aa6.5□□□□□ -1.37
COPS7B-220ENST00000479430 CDK11AQ9UQ88 783 aaPredicted RBP6.49□□□□□ -1.37
COPS7B-220ENST00000479430 CPS1P31327 1500 aa6.49□□□□□ -1.37
COPS7B-220ENST00000479430 TNRQ92752 1358 aa6.48□□□□□ -1.37
COPS7B-220ENST00000479430 GPATCH8Q9UKJ3 1502 aaKnown RBP6.48□□□□□ -1.37
COPS7B-220ENST00000479430 NPHP4O75161 1426 aaPredicted RBP6.48□□□□□ -1.37
COPS7B-220ENST00000479430 ZC3H13Q5T200 1668 aaKnown RBP6.48□□□□□ -1.37
COPS7B-220ENST00000479430 RNF17Q9BXT8 1623 aaKnown RBP6.47□□□□□ -1.37
COPS7B-220ENST00000479430 ROBO1Q9Y6N7 1651 aa6.47□□□□□ -1.37
COPS7B-220ENST00000479430 KIF3BO15066 747 aa6.47□□□□□ -1.37
COPS7B-220ENST00000479430 ZC3H15Q8WU90 426 aaKnown RBP6.47□□□□□ -1.37
COPS7B-220ENST00000479430 TRIM52Q96A61 297 aa6.47□□□□□ -1.37
COPS7B-220ENST00000479430 TSPYL2Q9H2G4 693 aaPredicted RBP6.47□□□□□ -1.37
COPS7B-220ENST00000479430 PCDHB8Q9UN66 801 aa6.47□□□□□ -1.37
COPS7B-220ENST00000479430 PCDHB13Q9Y5F0 798 aa6.47□□□□□ -1.37
COPS7B-220ENST00000479430 FMN1Q68DA7 1419 aa6.47□□□□□ -1.37
COPS7B-220ENST00000479430 PHLPP1O60346 1717 aa6.46□□□□□ -1.38
COPS7B-220ENST00000479430 PPP1R37O75864 691 aa6.46□□□□□ -1.38
COPS7B-220ENST00000479430 ANKLE2Q86XL3 938 aa6.46□□□□□ -1.38
COPS7B-220ENST00000479430 MFRPQ9BY79 579 aa6.46□□□□□ -1.38
COPS7B-220ENST00000479430 UGGT1Q9NYU2 1555 aa6.46□□□□□ -1.38
COPS7B-220ENST00000479430 UBR1Q8IWV7 1749 aa6.45□□□□□ -1.38
COPS7B-220ENST00000479430 SEMA3EO15041 775 aa6.45□□□□□ -1.38
COPS7B-220ENST00000479430 SLC24A3Q9HC58 644 aa6.45□□□□□ -1.38
COPS7B-220ENST00000479430 CFDP1Q9UEE9 299 aaPredicted RBP6.45□□□□□ -1.38
COPS7B-220ENST00000479430 DAXXQ9UER7 740 aaPredicted RBP6.45□□□□□ -1.38
COPS7B-220ENST00000479430 MYO5BQ9ULV0 1848 aa6.45□□□□□ -1.38
COPS7B-220ENST00000479430 PDAP1Q13442 181 aaKnown RBP6.44□□□□□ -1.38
COPS7B-220ENST00000479430 ZNF467Q7Z7K2 595 aaPredicted RBP6.44□□□□□ -1.38
COPS7B-220ENST00000479430 ARHGEF1Q92888 912 aaKnown RBP6.44□□□□□ -1.38
COPS7B-220ENST00000479430 RBM42Q9BTD8 480 aaKnown RBP6.44□□□□□ -1.38
COPS7B-220ENST00000479430 TIAM1Q13009 1591 aa6.44□□□□□ -1.38
COPS7B-220ENST00000479430 DEPDC5O75140 1603 aa6.43□□□□□ -1.38
COPS7B-220ENST00000479430 LTKP29376 864 aa6.43□□□□□ -1.38
COPS7B-220ENST00000479430 NEUROD2Q15784 382 aa6.43□□□□□ -1.38
COPS7B-220ENST00000479430 HOMEZQ8IX15 550 aa6.43□□□□□ -1.38
COPS7B-220ENST00000479430 WASHC2CQ9Y4E1 1318 aa6.43□□□□□ -1.38
COPS7B-220ENST00000479430 CCNB3Q8WWL7 1395 aa6.43□□□□□ -1.38
COPS7B-220ENST00000479430 PITPNM1O00562 1244 aa6.42□□□□□ -1.38
COPS7B-220ENST00000479430 E2F4Q16254 413 aa6.42□□□□□ -1.38
COPS7B-220ENST00000479430 CHADLQ6NUI6 762 aa6.42□□□□□ -1.38
COPS7B-220ENST00000479430 UPF1Q92900 1129 aaKnown RBP eCLIP6.42□□□□□ -1.38
COPS7B-220ENST00000479430 SYNMO15061 1565 aa6.42□□□□□ -1.38
COPS7B-220ENST00000479430 CASKIN1Q8WXD9 1431 aa6.42□□□□□ -1.38
COPS7B-220ENST00000479430 MIA2Q96PC5 1412 aa6.42□□□□□ -1.38
COPS7B-220ENST00000479430 PZPP20742 1482 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 KDM5DQ9BY66 1539 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 FAM135AQ9P2D6 1515 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 LRP6O75581 1613 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 PSEN1P49768 467 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 THEMISQ8N1K5 641 aaPredicted RBP6.41□□□□□ -1.38
COPS7B-220ENST00000479430 EEA1Q15075 1411 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 MED14O60244 1454 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 CCDC18Q5T9S5 1454 aa6.41□□□□□ -1.38
COPS7B-220ENST00000479430 PIK3C2BO00750 1634 aa6.4□□□□□ -1.38
COPS7B-220ENST00000479430 TESPA1A2RU30 521 aaPredicted RBP6.4□□□□□ -1.38
COPS7B-220ENST00000479430 TXNDC2Q86VQ3 553 aa6.4□□□□□ -1.38
COPS7B-220ENST00000479430 SLC26A8Q96RN1 970 aa6.4□□□□□ -1.38
COPS7B-220ENST00000479430 DHX29Q7Z478 1369 aaKnown RBP6.4□□□□□ -1.39
COPS7B-220ENST00000479430 NCOA2Q15596 1464 aa6.4□□□□□ -1.39
COPS7B-220ENST00000479430 MBD5Q9P267 1494 aa6.4□□□□□ -1.39
COPS7B-220ENST00000479430 NUTM2BA6NNL0 878 aaPredicted RBP6.39□□□□□ -1.39
COPS7B-220ENST00000479430 NUTM2EB1AL46 878 aaPredicted RBP6.39□□□□□ -1.39
COPS7B-220ENST00000479430 NUTM2AQ8IVF1 878 aaPredicted RBP6.39□□□□□ -1.39
COPS7B-220ENST00000479430 TMEM94Q12767 1356 aa6.39□□□□□ -1.39
COPS7B-220ENST00000479430 PROSER2Q86WR7 435 aaPredicted RBP6.38□□□□□ -1.39
COPS7B-220ENST00000479430 EFCAB3Q8N7B9 438 aa6.38□□□□□ -1.39
COPS7B-220ENST00000479430 MTUS2Q5JR59 1369 aa6.38□□□□□ -1.39
COPS7B-220ENST00000479430 ABCC3O15438 1527 aa6.38□□□□□ -1.39
COPS7B-220ENST00000479430 MAP3K1Q13233 1512 aa6.38□□□□□ -1.39
COPS7B-220ENST00000479430 MROH1Q8NDA8 1641 aa6.38□□□□□ -1.39
COPS7B-220ENST00000479430 ERVK-7P63135 1459 aa6.37□□□□□ -1.39
COPS7B-220ENST00000479430 CAMSAP2Q08AD1 1489 aa6.37□□□□□ -1.39
COPS7B-220ENST00000479430 KIAA1107Q9UPP5 1409 aa6.37□□□□□ -1.39
COPS7B-220ENST00000479430 ZMYND10O75800 440 aa6.37□□□□□ -1.39
COPS7B-220ENST00000479430 MEX3CQ5U5Q3 659 aaKnown RBP6.37□□□□□ -1.39
COPS7B-220ENST00000479430 NUTM2DQ5VT03 806 aaPredicted RBP6.37□□□□□ -1.39
COPS7B-220ENST00000479430 FBXO22Q8NEZ5 403 aa6.37□□□□□ -1.39
COPS7B-220ENST00000479430 PHF8Q9UPP1 1060 aa6.37□□□□□ -1.39
COPS7B-220ENST00000479430 COL16A1Q07092 1604 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms