RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 DISP3Q9P2K9 1392 aa11.37□□□□□ -0.59
USP30-206ENST00000479219 PDE3BQ13370 1112 aa11.37□□□□□ -0.59
USP30-206ENST00000479219 AFAP1Q8N556 730 aa11.36□□□□□ -0.59
USP30-206ENST00000479219 KIDINS220Q9ULH0 1771 aa11.36□□□□□ -0.59
USP30-206ENST00000479219 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
USP30-206ENST00000479219 IFT172Q9UG01 1749 aa11.36□□□□□ -0.59
USP30-206ENST00000479219 IRX6P78412 446 aaPredicted RBP11.36□□□□□ -0.59
USP30-206ENST00000479219 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
USP30-206ENST00000479219 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
USP30-206ENST00000479219 KDM5AP29375 1690 aaKnown RBP11.34□□□□□ -0.59
USP30-206ENST00000479219 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
USP30-206ENST00000479219 PPRC1Q5VV67 1664 aaKnown RBP11.32□□□□□ -0.6
USP30-206ENST00000479219 CNGB1Q14028 1251 aaPredicted RBP11.32□□□□□ -0.6
USP30-206ENST00000479219 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 NPC1L1Q9UHC9 1359 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP30-206ENST00000479219 PANK3Q9H999 370 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 HECW2Q9P2P5 1572 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 MYOM1P52179 1685 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 MLH3Q9UHC1 1453 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 KIF3BO15066 747 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 ABCA6Q8N139 1617 aa11.31□□□□□ -0.6
USP30-206ENST00000479219 SETBP1Q9Y6X0 1596 aa11.3□□□□□ -0.6
USP30-206ENST00000479219 POGZQ7Z3K3 1410 aa11.3□□□□□ -0.6
USP30-206ENST00000479219 NRXN1Q9ULB1 1477 aa11.3□□□□□ -0.6
USP30-206ENST00000479219 ASXL1Q8IXJ9 1541 aa11.29□□□□□ -0.6
USP30-206ENST00000479219 ADGRB3O60242 1522 aa11.29□□□□□ -0.6
USP30-206ENST00000479219 KNSTRNQ9Y448 316 aa11.29□□□□□ -0.6
USP30-206ENST00000479219 MROH2AA6NES4 1674 aa11.28□□□□□ -0.6
USP30-206ENST00000479219 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
USP30-206ENST00000479219 NEO1Q92859 1461 aa11.27□□□□□ -0.61
USP30-206ENST00000479219 PPLO60437 1756 aa11.27□□□□□ -0.61
USP30-206ENST00000479219 PIK3C2GO75747 1445 aa11.27□□□□□ -0.61
USP30-206ENST00000479219 CD109Q6YHK3 1445 aa11.27□□□□□ -0.61
USP30-206ENST00000479219 B4GALNT3Q6L9W6 998 aa11.26□□□□□ -0.61
USP30-206ENST00000479219 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
USP30-206ENST00000479219 CCDC136Q96JN2 1154 aa11.26□□□□□ -0.61
USP30-206ENST00000479219 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
USP30-206ENST00000479219 DEKP35659 375 aaKnown RBP11.25□□□□□ -0.61
USP30-206ENST00000479219 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
USP30-206ENST00000479219 FRMPD1Q5SYB0 1578 aa11.25□□□□□ -0.61
USP30-206ENST00000479219 RRP1P56182 461 aaKnown RBP11.24□□□□□ -0.61
USP30-206ENST00000479219 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
USP30-206ENST00000479219 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
USP30-206ENST00000479219 RPGRIP1LQ68CZ1 1315 aa11.23□□□□□ -0.61
USP30-206ENST00000479219 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
USP30-206ENST00000479219 ABCC3O15438 1527 aa11.22□□□□□ -0.61
USP30-206ENST00000479219 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
USP30-206ENST00000479219 WDR43Q15061 677 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP30-206ENST00000479219 PPP2R1AP30153 589 aa11.21□□□□□ -0.61
USP30-206ENST00000479219 PIK3C2BO00750 1634 aa11.21□□□□□ -0.61
USP30-206ENST00000479219 NPATQ14207 1427 aa11.21□□□□□ -0.62
USP30-206ENST00000479219 NGEFQ8N5V2 710 aa11.21□□□□□ -0.62
USP30-206ENST00000479219 QRICH2Q9H0J4 1663 aa11.21□□□□□ -0.62
USP30-206ENST00000479219 NOP58Q9Y2X3 529 aaKnown RBP11.2□□□□□ -0.62
USP30-206ENST00000479219 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
USP30-206ENST00000479219 ADGRF5Q8IZF2 1346 aa11.19□□□□□ -0.62
USP30-206ENST00000479219 RICTORQ6R327 1708 aa11.19□□□□□ -0.62
USP30-206ENST00000479219 NOS1P29475 1434 aa11.19□□□□□ -0.62
USP30-206ENST00000479219 ARHGAP31Q2M1Z3 1444 aa11.19□□□□□ -0.62
USP30-206ENST00000479219 DIP2CQ9Y2E4 1556 aa11.18□□□□□ -0.62
USP30-206ENST00000479219 EIF5BO60841 1220 aaKnown RBP11.18□□□□□ -0.62
USP30-206ENST00000479219 CFAP70Q5T0N1 1121 aa11.18□□□□□ -0.62
USP30-206ENST00000479219 ADGRB1O14514 1584 aa11.18□□□□□ -0.62
USP30-206ENST00000479219 CENPJQ9HC77 1338 aaPredicted RBP11.17□□□□□ -0.62
USP30-206ENST00000479219 PUS7Q96PZ0 661 aaKnown RBP11.16□□□□□ -0.62
USP30-206ENST00000479219 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
USP30-206ENST00000479219 GLI2P10070 1586 aa11.16□□□□□ -0.62
USP30-206ENST00000479219 CFAP65Q6ZU64 1925 aaKnown RBP11.16□□□□□ -0.62
USP30-206ENST00000479219 C14orf93Q9H972 538 aaKnown RBP11.15□□□□□ -0.62
USP30-206ENST00000479219 SIGLEC1Q9BZZ2 1709 aa11.14□□□□□ -0.63
USP30-206ENST00000479219 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
USP30-206ENST00000479219 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
USP30-206ENST00000479219 NEXMIFQ5QGS0 1516 aa11.14□□□□□ -0.63
USP30-206ENST00000479219 ZNF521Q96K83 1311 aa11.14□□□□□ -0.63
USP30-206ENST00000479219 TCERG1O14776 1098 aaKnown RBP11.13□□□□□ -0.63
USP30-206ENST00000479219 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.13□□□□□ -0.63
USP30-206ENST00000479219 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
USP30-206ENST00000479219 POLR3AO14802 1390 aaPredicted RBP11.13□□□□□ -0.63
USP30-206ENST00000479219 GOLGA2Q08379 1002 aa11.13□□□□□ -0.63
USP30-206ENST00000479219 GGT6Q6P531 493 aa11.13□□□□□ -0.63
USP30-206ENST00000479219 CDCA7LQ96GN5 454 aa11.13□□□□□ -0.63
USP30-206ENST00000479219 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
USP30-206ENST00000479219 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
USP30-206ENST00000479219 NSD2O96028 1365 aa11.12□□□□□ -0.63
USP30-206ENST00000479219 MS4A1P11836 297 aa11.12□□□□□ -0.63
USP30-206ENST00000479219 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
USP30-206ENST00000479219 CHGAP10645 457 aaKnown RBP11.11□□□□□ -0.63
USP30-206ENST00000479219 PREX1Q8TCU6 1659 aa11.11□□□□□ -0.63
USP30-206ENST00000479219 PLEKHH1Q9ULM0 1364 aa11.11□□□□□ -0.63
USP30-206ENST00000479219 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
USP30-206ENST00000479219 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
USP30-206ENST00000479219 SLC52A1Q9NWF4 448 aa11.11□□□□□ -0.63
USP30-206ENST00000479219 NBR1Q14596 966 aa11.1□□□□□ -0.63
USP30-206ENST00000479219 RTL5Q5HYW3 569 aaPredicted RBP11.1□□□□□ -0.63
USP30-206ENST00000479219 REREQ9P2R6 1566 aa11.09□□□□□ -0.63
USP30-206ENST00000479219 DUSP27Q5VZP5 1158 aa11.09□□□□□ -0.63
USP30-206ENST00000479219 NKTRP30414 1462 aaKnown RBP11.09□□□□□ -0.63
USP30-206ENST00000479219 PAK3O75914 559 aaPredicted RBP11.09□□□□□ -0.63
USP30-206ENST00000479219 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms