RNA–Protein interactions for RNA: ENST00000478974.1

ITGB8-204, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 2,054 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-204ENST00000478974 KIAA1210Q9ULL0 1709 aa34.04■■■■□ 3.04
ITGB8-204ENST00000478974 CNGB1Q14028 1251 aaPredicted RBP34.03■■■■□ 3.04
ITGB8-204ENST00000478974 PIK3C2BO00750 1634 aa34.01■■■■□ 3.04
ITGB8-204ENST00000478974 REREQ9P2R6 1566 aa34■■■■□ 3.03
ITGB8-204ENST00000478974 NRXN1Q9ULB1 1477 aa34■■■■□ 3.03
ITGB8-204ENST00000478974 SCAF11Q99590 1463 aaKnown RBP33.99■■■■□ 3.03
ITGB8-204ENST00000478974 PPLO60437 1756 aa33.98■■■■□ 3.03
ITGB8-204ENST00000478974 AGLP35573 1532 aa33.96■■■■□ 3.03
ITGB8-204ENST00000478974 TMF1P82094 1093 aa33.94■■■■□ 3.02
ITGB8-204ENST00000478974 IDI1Q13907 227 aa33.94■■■■□ 3.02
ITGB8-204ENST00000478974 PREX1Q8TCU6 1659 aa33.93■■■■□ 3.02
ITGB8-204ENST00000478974 FBXO31Q5XUX0 539 aaPredicted RBP33.91■■■■□ 3.02
ITGB8-204ENST00000478974 MRS2Q9HD23 443 aa33.91■■■■□ 3.02
ITGB8-204ENST00000478974 ARHGEF40Q8TER5 1519 aa33.89■■■■□ 3.02
ITGB8-204ENST00000478974 RPGRIP1LQ68CZ1 1315 aa33.89■■■■□ 3.02
ITGB8-204ENST00000478974 MLECQ14165 292 aa33.88■■■■□ 3.01
ITGB8-204ENST00000478974 NUTM2DQ5VT03 806 aaPredicted RBP33.87■■■■□ 3.01
ITGB8-204ENST00000478974 PIK3C2GO75747 1445 aa33.87■■■■□ 3.01
ITGB8-204ENST00000478974 CLTCQ00610 1675 aaKnown RBP33.84■■■■□ 3.01
ITGB8-204ENST00000478974 SLC52A1Q9NWF4 448 aa33.84■■■■□ 3.01
ITGB8-204ENST00000478974 NEXMIFQ5QGS0 1516 aa33.83■■■■□ 3.01
ITGB8-204ENST00000478974 PER1O15534 1290 aaPredicted RBP33.83■■■■□ 3.01
ITGB8-204ENST00000478974 C14orf93Q9H972 538 aaKnown RBP33.83■■■■□ 3.01
ITGB8-204ENST00000478974 MYO5BQ9ULV0 1848 aa33.82■■■■□ 3.01
ITGB8-204ENST00000478974 FAM9BQ8IZU0 186 aa33.81■■■■□ 3
ITGB8-204ENST00000478974 PPP6R1Q9UPN7 881 aa33.81■■■■□ 3
ITGB8-204ENST00000478974 EIF3AQ14152 1382 aaKnown RBP33.8■■■■□ 3
ITGB8-204ENST00000478974 ERVK-7P63135 1459 aa33.8■■■■□ 3
ITGB8-204ENST00000478974 HNRNPUQ00839 825 aaKnown RBP eCLIP33.8■■■■□ 3
ITGB8-204ENST00000478974 PANK3Q9H999 370 aa33.8■■■■□ 3
ITGB8-204ENST00000478974 TMEM131LA2VDJ0 1609 aa33.78■■■■□ 3
ITGB8-204ENST00000478974 SETBP1Q9Y6X0 1596 aa33.78■■■■□ 3
ITGB8-204ENST00000478974 TMEM132EQ6IEE7 984 aa33.76■■■□□ 2.99
ITGB8-204ENST00000478974 ADGRB1O14514 1584 aa33.75■■■□□ 2.99
ITGB8-204ENST00000478974 VGFO15240 615 aaPredicted RBP33.74■■■□□ 2.99
ITGB8-204ENST00000478974 TRAK1Q9UPV9 953 aa33.7■■■□□ 2.99
ITGB8-204ENST00000478974 RALBP1Q15311 655 aa33.69■■■□□ 2.98
ITGB8-204ENST00000478974 MYO3AQ8NEV4 1616 aa33.69■■■□□ 2.98
ITGB8-204ENST00000478974 SENP3Q9H4L4 574 aaPredicted RBP33.68■■■□□ 2.98
ITGB8-204ENST00000478974 CDCA8Q53HL2 280 aa33.67■■■□□ 2.98
ITGB8-204ENST00000478974 KTN1Q86UP2 1357 aaKnown RBP33.67■■■□□ 2.98
ITGB8-204ENST00000478974 PARD3Q8TEW0 1356 aa33.66■■■□□ 2.98
ITGB8-204ENST00000478974 MYBBP1AQ9BQG0 1328 aaKnown RBP33.66■■■□□ 2.98
ITGB8-204ENST00000478974 ZFYVE9O95405 1425 aa33.65■■■□□ 2.98
ITGB8-204ENST00000478974 SPATA31D1Q6ZQQ2 1576 aa33.65■■■□□ 2.98
ITGB8-204ENST00000478974 MYOM1P52179 1685 aa33.64■■■□□ 2.98
ITGB8-204ENST00000478974 CC2D1BQ5T0F9 858 aaKnown RBP33.63■■■□□ 2.97
ITGB8-204ENST00000478974 CENPJQ9HC77 1338 aaPredicted RBP33.63■■■□□ 2.97
ITGB8-204ENST00000478974 KDM5AP29375 1690 aaKnown RBP33.62■■■□□ 2.97
ITGB8-204ENST00000478974 TMC1Q8TDI8 760 aa33.61■■■□□ 2.97
ITGB8-204ENST00000478974 ZMYM3Q14202 1370 aa33.6■■■□□ 2.97
ITGB8-204ENST00000478974 PNISRQ8TF01 805 aaKnown RBP33.6■■■□□ 2.97
ITGB8-204ENST00000478974 STAG3Q9UJ98 1225 aa33.58■■■□□ 2.97
ITGB8-204ENST00000478974 SBNO2Q9Y2G9 1366 aa33.58■■■□□ 2.97
ITGB8-204ENST00000478974 ESF1Q9H501 851 aaKnown RBP33.57■■■□□ 2.96
ITGB8-204ENST00000478974 BRD4O60885 1362 aaPredicted RBP33.57■■■□□ 2.96
ITGB8-204ENST00000478974 QRICH2Q9H0J4 1663 aa33.56■■■□□ 2.96
ITGB8-204ENST00000478974 SLC24A1O60721 1099 aa33.55■■■□□ 2.96
ITGB8-204ENST00000478974 TRHP20396 242 aaPredicted RBP33.54■■■□□ 2.96
ITGB8-204ENST00000478974 A2ML1A8K2U0 1454 aa33.54■■■□□ 2.96
ITGB8-204ENST00000478974 ASXL1Q8IXJ9 1541 aa33.54■■■□□ 2.96
ITGB8-204ENST00000478974 ARHGEF28Q8N1W1 1705 aaKnown RBP33.51■■■□□ 2.96
ITGB8-204ENST00000478974 KNSTRNQ9Y448 316 aa33.51■■■□□ 2.95
ITGB8-204ENST00000478974 NLRP13Q86W25 1043 aa33.5■■■□□ 2.95
ITGB8-204ENST00000478974 AMER1Q5JTC6 1135 aaPredicted RBP33.49■■■□□ 2.95
ITGB8-204ENST00000478974 STK26Q9P289 416 aa33.47■■■□□ 2.95
ITGB8-204ENST00000478974 SUPT16HQ9Y5B9 1047 aaKnown RBP33.46■■■□□ 2.95
ITGB8-204ENST00000478974 ZBED9Q6R2W3 1325 aa33.46■■■□□ 2.95
ITGB8-204ENST00000478974 LRPPRCP42704 1394 aaKnown RBP33.44■■■□□ 2.94
ITGB8-204ENST00000478974 ALKQ9UM73 1620 aa33.43■■■□□ 2.94
ITGB8-204ENST00000478974 RIMS2Q9UQ26 1411 aa33.43■■■□□ 2.94
ITGB8-204ENST00000478974 CARD14Q9BXL6 1004 aa33.42■■■□□ 2.94
ITGB8-204ENST00000478974 SENP3-EIF4A1A0A087X0R7 540 aa33.4■■■□□ 2.94
ITGB8-204ENST00000478974 SAFB2Q14151 953 aaKnown RBP eCLIP33.4■■■□□ 2.94
ITGB8-204ENST00000478974 TNRQ92752 1358 aa33.37■■■□□ 2.93
ITGB8-204ENST00000478974 TULP4Q9NRJ4 1543 aa33.37■■■□□ 2.93
ITGB8-204ENST00000478974 YTHDC2Q9H6S0 1430 aaKnown RBP33.37■■■□□ 2.93
ITGB8-204ENST00000478974 SLC12A5Q9H2X9 1139 aa33.35■■■□□ 2.93
ITGB8-204ENST00000478974 PTPRMP28827 1452 aa33.35■■■□□ 2.93
ITGB8-204ENST00000478974 CEBPAP49715 358 aaPredicted RBP33.33■■■□□ 2.93
ITGB8-204ENST00000478974 PPP2R1AP30153 589 aa33.32■■■□□ 2.92
ITGB8-204ENST00000478974 NPC1L1Q9UHC9 1359 aa33.32■■■□□ 2.92
ITGB8-204ENST00000478974 EVC2Q86UK5 1308 aa33.31■■■□□ 2.92
ITGB8-204ENST00000478974 FKBP8Q14318 412 aa33.31■■■□□ 2.92
ITGB8-204ENST00000478974 PRAM1Q96QH2 718 aa33.3■■■□□ 2.92
ITGB8-204ENST00000478974 SETD1AO15047 1707 aaKnown RBP33.29■■■□□ 2.92
ITGB8-204ENST00000478974 CABP2Q9NPB3 220 aa33.28■■■□□ 2.92
ITGB8-204ENST00000478974 NRXN3Q9Y4C0 1643 aa33.26■■■□□ 2.92
ITGB8-204ENST00000478974 UBR1Q8IWV7 1749 aa33.25■■■□□ 2.91
ITGB8-204ENST00000478974 PUS7Q96PZ0 661 aaKnown RBP33.24■■■□□ 2.91
ITGB8-204ENST00000478974 POGKQ9P215 609 aa33.24■■■□□ 2.91
ITGB8-204ENST00000478974 MINK1Q8N4C8 1332 aaPredicted RBP33.24■■■□□ 2.91
ITGB8-204ENST00000478974 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.24■■■□□ 2.91
ITGB8-204ENST00000478974 NSD3Q9BZ95 1437 aa33.21■■■□□ 2.91
ITGB8-204ENST00000478974 C3P01024 1663 aa33.21■■■□□ 2.91
ITGB8-204ENST00000478974 PLPPR3Q6T4P5 718 aa33.2■■■□□ 2.91
ITGB8-204ENST00000478974 TMEM2Q9UHN6 1383 aa33.18■■■□□ 2.9
ITGB8-204ENST00000478974 FER1L4A9Z1Z3 1794 aa33.17■■■□□ 2.9
ITGB8-204ENST00000478974 METP08581 1390 aa33.17■■■□□ 2.9
ITGB8-204ENST00000478974 NEFLP07196 543 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms