RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 ERBB4Q15303 1308 aa4.48□□□□□ -1.69
SRRM1-211ENST00000478890 APLP1P51693 650 aa4.48□□□□□ -1.69
SRRM1-211ENST00000478890 COPS2P61201 443 aa4.48□□□□□ -1.69
SRRM1-211ENST00000478890 CYP4X1Q8N118 509 aa4.48□□□□□ -1.69
SRRM1-211ENST00000478890 FBXW7Q969H0 707 aa4.48□□□□□ -1.69
SRRM1-211ENST00000478890 EVI5O60447 810 aa4.47□□□□□ -1.69
SRRM1-211ENST00000478890 SAMD7Q7Z3H4 446 aa4.47□□□□□ -1.69
SRRM1-211ENST00000478890 ECM2O94769 699 aaPredicted RBP4.46□□□□□ -1.7
SRRM1-211ENST00000478890 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
SRRM1-211ENST00000478890 NECTIN2Q92692 538 aa4.46□□□□□ -1.7
SRRM1-211ENST00000478890 BCL11BQ9C0K0 894 aaPredicted RBP4.46□□□□□ -1.7
SRRM1-211ENST00000478890 TAOK2Q9UL54 1235 aa4.46□□□□□ -1.7
SRRM1-211ENST00000478890 PCDHGA10Q9Y5H3 936 aa4.45□□□□□ -1.7
SRRM1-211ENST00000478890 PACS2Q86VP3 889 aa4.44□□□□□ -1.7
SRRM1-211ENST00000478890 VEGFBP49765 207 aa4.43□□□□□ -1.7
SRRM1-211ENST00000478890 TYW1BQ6NUM6 668 aa4.43□□□□□ -1.7
SRRM1-211ENST00000478890 RNF25Q96BH1 459 aaPredicted RBP4.43□□□□□ -1.7
SRRM1-211ENST00000478890 PPEF1O14829 653 aaPredicted RBP4.42□□□□□ -1.7
SRRM1-211ENST00000478890 KANK3Q6NY19 840 aa4.42□□□□□ -1.7
SRRM1-211ENST00000478890 ADAMTS8Q9UP79 889 aa4.42□□□□□ -1.7
SRRM1-211ENST00000478890 STK24Q9Y6E0 443 aa4.42□□□□□ -1.7
SRRM1-211ENST00000478890 STK25O00506 426 aa4.41□□□□□ -1.7
SRRM1-211ENST00000478890 MSTNO14793 375 aa4.41□□□□□ -1.7
SRRM1-211ENST00000478890 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
SRRM1-211ENST00000478890 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
SRRM1-211ENST00000478890 TTC24A2A3L6 582 aaPredicted RBP4.39□□□□□ -1.71
SRRM1-211ENST00000478890 K7ELQ4 463 aaPredicted RBP4.39□□□□□ -1.71
SRRM1-211ENST00000478890 RNF40O75150 1001 aa4.39□□□□□ -1.71
SRRM1-211ENST00000478890 S1PR4O95977 384 aa4.39□□□□□ -1.71
SRRM1-211ENST00000478890 VSIG8P0DPA2 414 aa4.39□□□□□ -1.71
SRRM1-211ENST00000478890 IRS1P35568 1242 aa4.39□□□□□ -1.71
SRRM1-211ENST00000478890 C6orf132Q5T0Z8 1188 aa4.39□□□□□ -1.71
SRRM1-211ENST00000478890 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
SRRM1-211ENST00000478890 PPP1R37O75864 691 aa4.38□□□□□ -1.71
SRRM1-211ENST00000478890 PHF14O94880 888 aa4.38□□□□□ -1.71
SRRM1-211ENST00000478890 HDGFP51858 240 aaKnown RBP4.38□□□□□ -1.71
SRRM1-211ENST00000478890 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
SRRM1-211ENST00000478890 GOLGA2P5Q9HBQ8 144 aa4.38□□□□□ -1.71
SRRM1-211ENST00000478890 RGL2O15211 777 aa4.37□□□□□ -1.71
SRRM1-211ENST00000478890 DCAF8L2P0C7V8 631 aa4.37□□□□□ -1.71
SRRM1-211ENST00000478890 PKD2Q13563 968 aa4.37□□□□□ -1.71
SRRM1-211ENST00000478890 PLA2G2CQ5R387 149 aa4.36□□□□□ -1.71
SRRM1-211ENST00000478890 PRR14Q9BWN1 585 aa4.36□□□□□ -1.71
SRRM1-211ENST00000478890 SMPD1P17405 629 aa4.35□□□□□ -1.71
SRRM1-211ENST00000478890 RPIAP49247 311 aa4.35□□□□□ -1.71
SRRM1-211ENST00000478890 SPOCK3Q9BQ16 436 aa4.35□□□□□ -1.71
SRRM1-211ENST00000478890 TSKSQ9UJT2 592 aa4.35□□□□□ -1.71
SRRM1-211ENST00000478890 PCDHB3Q9Y5E6 796 aa4.35□□□□□ -1.71
SRRM1-211ENST00000478890 TLL1O43897 1013 aa4.34□□□□□ -1.71
SRRM1-211ENST00000478890 CD2BP2O95400 341 aaKnown RBP4.33□□□□□ -1.72
SRRM1-211ENST00000478890 PPP1R15BQ5SWA1 713 aa4.32□□□□□ -1.72
SRRM1-211ENST00000478890 GALNT6Q8NCL4 622 aa4.32□□□□□ -1.72
SRRM1-211ENST00000478890 SNIP1Q8TAD8 396 aaKnown RBP4.32□□□□□ -1.72
SRRM1-211ENST00000478890 EPAS1Q99814 870 aa4.32□□□□□ -1.72
SRRM1-211ENST00000478890 SMAPO00193 183 aa4.31□□□□□ -1.72
SRRM1-211ENST00000478890 CHGAP10645 457 aaKnown RBP4.31□□□□□ -1.72
SRRM1-211ENST00000478890 MAP3K9P80192 1104 aa4.31□□□□□ -1.72
SRRM1-211ENST00000478890 PLA2G4EQ3MJ16 856 aa4.31□□□□□ -1.72
SRRM1-211ENST00000478890 BLOC1S3Q6QNY0 202 aa4.31□□□□□ -1.72
SRRM1-211ENST00000478890 SLF2Q8IX21 1173 aa4.3□□□□□ -1.72
SRRM1-211ENST00000478890 SCARF2Q96GP6 870 aaPredicted RBP4.3□□□□□ -1.72
SRRM1-211ENST00000478890 NBPF26B4DH59 902 aa4.29□□□□□ -1.72
SRRM1-211ENST00000478890 ADH1BP00325 375 aa4.29□□□□□ -1.72
SRRM1-211ENST00000478890 SLC6A16Q9GZN6 736 aa4.29□□□□□ -1.72
SRRM1-211ENST00000478890 PROCP04070 461 aa4.28□□□□□ -1.72
SRRM1-211ENST00000478890 SLC4A3P48751 1232 aa4.28□□□□□ -1.72
SRRM1-211ENST00000478890 MARSP56192 900 aaKnown RBP4.28□□□□□ -1.72
SRRM1-211ENST00000478890 HS6ST3Q8IZP7 471 aa4.28□□□□□ -1.72
SRRM1-211ENST00000478890 COBLO75128 1261 aa4.27□□□□□ -1.73
SRRM1-211ENST00000478890 HPS1Q92902 700 aa4.27□□□□□ -1.73
SRRM1-211ENST00000478890 SLURP2P0DP57 97 aa4.26□□□□□ -1.73
SRRM1-211ENST00000478890 TATDN2Q93075 761 aa4.26□□□□□ -1.73
SRRM1-211ENST00000478890 J3QL48 77 aa4.25□□□□□ -1.73
SRRM1-211ENST00000478890 WNT7AO00755 349 aa4.25□□□□□ -1.73
SRRM1-211ENST00000478890 SVOPQ8N4V2 548 aa4.25□□□□□ -1.73
SRRM1-211ENST00000478890 RYDENQ9NUL5 291 aaKnown RBP4.25□□□□□ -1.73
SRRM1-211ENST00000478890 PNMA3Q9UL41 463 aa4.25□□□□□ -1.73
SRRM1-211ENST00000478890 CRISPLD2Q9H0B8 497 aa4.24□□□□□ -1.73
SRRM1-211ENST00000478890 ITGB2P05107 769 aa4.23□□□□□ -1.73
SRRM1-211ENST00000478890 ZNF385CQ66K41 422 aaPredicted RBP4.23□□□□□ -1.73
SRRM1-211ENST00000478890 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
SRRM1-211ENST00000478890 TRIM46Q7Z4K8 759 aa4.23□□□□□ -1.73
SRRM1-211ENST00000478890 CDCA7LQ96GN5 454 aa4.23□□□□□ -1.73
SRRM1-211ENST00000478890 BMP1P13497 986 aa4.22□□□□□ -1.73
SRRM1-211ENST00000478890 RBM33Q96EV2 1170 aaKnown RBP4.22□□□□□ -1.73
SRRM1-211ENST00000478890 ARHGEF15O94989 841 aa4.21□□□□□ -1.74
SRRM1-211ENST00000478890 BAG6P46379 1132 aa4.21□□□□□ -1.74
SRRM1-211ENST00000478890 PRSS12P56730 875 aa4.21□□□□□ -1.74
SRRM1-211ENST00000478890 SWT1Q5T5J6 900 aaKnown RBP4.21□□□□□ -1.74
SRRM1-211ENST00000478890 DCAF5Q96JK2 942 aa4.21□□□□□ -1.74
SRRM1-211ENST00000478890 LAMC2Q13753 1193 aa4.2□□□□□ -1.74
SRRM1-211ENST00000478890 AMER1Q5JTC6 1135 aaPredicted RBP4.2□□□□□ -1.74
SRRM1-211ENST00000478890 FAM198AQ9UFP1 575 aa4.2□□□□□ -1.74
SRRM1-211ENST00000478890 C3orf80F5H4A9 247 aa4.19□□□□□ -1.74
SRRM1-211ENST00000478890 NR1I2O75469 434 aa4.19□□□□□ -1.74
SRRM1-211ENST00000478890 CNTNAP3BQ96NU0 1288 aa4.19□□□□□ -1.74
SRRM1-211ENST00000478890 CNTNAP3Q9BZ76 1288 aa4.19□□□□□ -1.74
SRRM1-211ENST00000478890 KRT76Q01546 638 aa4.18□□□□□ -1.74
SRRM1-211ENST00000478890 NKX1-1Q15270 411 aaPredicted RBP4.18□□□□□ -1.74
SRRM1-211ENST00000478890 CERKQ8TCT0 537 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms