RNA–Protein interactions for RNA: ENST00000478687.5

VRK2-209, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,021 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-209ENST00000478687 ONECUT3O60422 494 aaPredicted RBP9.66□□□□□ -0.86
VRK2-209ENST00000478687 CHGAP10645 457 aaKnown RBP9.66□□□□□ -0.86
VRK2-209ENST00000478687 RYDENQ9NUL5 291 aaKnown RBP9.66□□□□□ -0.86
VRK2-209ENST00000478687 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
VRK2-209ENST00000478687 KCNC4Q03721 635 aa9.65□□□□□ -0.86
VRK2-209ENST00000478687 TTBK1Q5TCY1 1321 aaPredicted RBP9.64□□□□□ -0.87
VRK2-209ENST00000478687 LAPTM4AQ15012 233 aa9.64□□□□□ -0.87
VRK2-209ENST00000478687 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
VRK2-209ENST00000478687 KIAA1468Q9P260 1216 aa9.63□□□□□ -0.87
VRK2-209ENST00000478687 KIAA0586Q9BVV6 1533 aa9.62□□□□□ -0.87
VRK2-209ENST00000478687 PHF14O94880 888 aa9.62□□□□□ -0.87
VRK2-209ENST00000478687 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
VRK2-209ENST00000478687 DDX27Q96GQ7 796 aaKnown RBP9.62□□□□□ -0.87
VRK2-209ENST00000478687 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
VRK2-209ENST00000478687 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
VRK2-209ENST00000478687 IGF1RP08069 1367 aa9.6□□□□□ -0.87
VRK2-209ENST00000478687 PTPRGP23470 1445 aa9.59□□□□□ -0.87
VRK2-209ENST00000478687 TRAF7Q6Q0C0 670 aa9.58□□□□□ -0.88
VRK2-209ENST00000478687 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
VRK2-209ENST00000478687 GTPBP6O43824 516 aaPredicted RBP9.57□□□□□ -0.88
VRK2-209ENST00000478687 FAM98CQ17RN3 349 aaKnown RBP9.57□□□□□ -0.88
VRK2-209ENST00000478687 CUL7Q14999 1698 aa9.57□□□□□ -0.88
VRK2-209ENST00000478687 ASXL2Q76L83 1435 aa9.56□□□□□ -0.88
VRK2-209ENST00000478687 KIF27Q86VH2 1401 aa9.56□□□□□ -0.88
VRK2-209ENST00000478687 ADGRL1O94910 1474 aa9.56□□□□□ -0.88
VRK2-209ENST00000478687 TRIM6-TRIM34B2RNG4 842 aa9.56□□□□□ -0.88
VRK2-209ENST00000478687 C6orf132Q5T0Z8 1188 aa9.56□□□□□ -0.88
VRK2-209ENST00000478687 TSR3Q9UJK0 312 aaKnown RBP9.56□□□□□ -0.88
VRK2-209ENST00000478687 ABCC2Q92887 1545 aa9.56□□□□□ -0.88
VRK2-209ENST00000478687 PPRC1Q5VV67 1664 aaKnown RBP9.55□□□□□ -0.88
VRK2-209ENST00000478687 TNIKQ9UKE5 1360 aa9.54□□□□□ -0.88
VRK2-209ENST00000478687 GFRA3O60609 400 aa9.54□□□□□ -0.88
VRK2-209ENST00000478687 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
VRK2-209ENST00000478687 PLB1Q6P1J6 1458 aa9.53□□□□□ -0.88
VRK2-209ENST00000478687 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
VRK2-209ENST00000478687 HPS5Q9UPZ3 1129 aa9.53□□□□□ -0.88
VRK2-209ENST00000478687 GLI2P10070 1586 aa9.53□□□□□ -0.88
VRK2-209ENST00000478687 COL17A1Q9UMD9 1497 aaPredicted RBP9.53□□□□□ -0.88
VRK2-209ENST00000478687 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.88
VRK2-209ENST00000478687 EPAS1Q99814 870 aa9.52□□□□□ -0.89
VRK2-209ENST00000478687 IQGAP2Q13576 1575 aa9.51□□□□□ -0.89
VRK2-209ENST00000478687 UACAQ9BZF9 1416 aa9.51□□□□□ -0.89
VRK2-209ENST00000478687 NRG2O14511 850 aaPredicted RBP9.51□□□□□ -0.89
VRK2-209ENST00000478687 TJAP1Q5JTD0 557 aa9.51□□□□□ -0.89
VRK2-209ENST00000478687 LRCH3Q96II8 777 aa9.51□□□□□ -0.89
VRK2-209ENST00000478687 CAMK2BQ13554 666 aa9.5□□□□□ -0.89
VRK2-209ENST00000478687 UHRF1BP1LA0JNW5 1464 aa9.5□□□□□ -0.89
VRK2-209ENST00000478687 EPRSP07814 1512 aaKnown RBP9.5□□□□□ -0.89
VRK2-209ENST00000478687 HECW2Q9P2P5 1572 aa9.5□□□□□ -0.89
VRK2-209ENST00000478687 DISP1Q96F81 1524 aa9.49□□□□□ -0.89
VRK2-209ENST00000478687 MAP3K4Q9Y6R4 1608 aa9.49□□□□□ -0.89
VRK2-209ENST00000478687 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
VRK2-209ENST00000478687 ZCCHC11Q5TAX3 1644 aaKnown RBP9.47□□□□□ -0.89
VRK2-209ENST00000478687 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
VRK2-209ENST00000478687 PRKD2Q9BZL6 878 aa9.47□□□□□ -0.89
VRK2-209ENST00000478687 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
VRK2-209ENST00000478687 TEX14Q8IWB6 1497 aa9.47□□□□□ -0.89
VRK2-209ENST00000478687 V9GY48 417 aaPredicted RBP9.46□□□□□ -0.9
VRK2-209ENST00000478687 KIAA0556O60303 1618 aa9.43□□□□□ -0.9
VRK2-209ENST00000478687 UGGT2Q9NYU1 1516 aa9.43□□□□□ -0.9
VRK2-209ENST00000478687 WDR7Q9Y4E6 1490 aa9.43□□□□□ -0.9
VRK2-209ENST00000478687 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
VRK2-209ENST00000478687 RAPGEF2Q9Y4G8 1499 aa9.41□□□□□ -0.9
VRK2-209ENST00000478687 DPYSL4O14531 572 aa9.41□□□□□ -0.9
VRK2-209ENST00000478687 MTRQ99707 1265 aa9.41□□□□□ -0.9
VRK2-209ENST00000478687 PPP4CP60510 307 aa9.4□□□□□ -0.9
VRK2-209ENST00000478687 EN1Q05925 392 aaPredicted RBP9.4□□□□□ -0.9
VRK2-209ENST00000478687 RBM33Q96EV2 1170 aaKnown RBP9.4□□□□□ -0.9
VRK2-209ENST00000478687 IL21Q9HBE4 155 aa9.4□□□□□ -0.9
VRK2-209ENST00000478687 FAM198AQ9UFP1 575 aa9.4□□□□□ -0.9
VRK2-209ENST00000478687 CD109Q6YHK3 1445 aa9.39□□□□□ -0.91
VRK2-209ENST00000478687 C3orf80F5H4A9 247 aa9.39□□□□□ -0.91
VRK2-209ENST00000478687 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
VRK2-209ENST00000478687 MAGI3Q5TCQ9 1506 aa9.38□□□□□ -0.91
VRK2-209ENST00000478687 SAMD7Q7Z3H4 446 aa9.38□□□□□ -0.91
VRK2-209ENST00000478687 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
VRK2-209ENST00000478687 KIF21BO75037 1637 aa9.38□□□□□ -0.91
VRK2-209ENST00000478687 CFAP43Q8NDM7 1665 aa9.37□□□□□ -0.91
VRK2-209ENST00000478687 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
VRK2-209ENST00000478687 DDX12PQ92771 950 aa9.37□□□□□ -0.91
VRK2-209ENST00000478687 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.37□□□□□ -0.91
VRK2-209ENST00000478687 ZNF787Q6DD87 383 aa9.36□□□□□ -0.91
VRK2-209ENST00000478687 ZNF775Q96BV0 537 aaPredicted RBP9.36□□□□□ -0.91
VRK2-209ENST00000478687 ARID3CA6NKF2 412 aa9.35□□□□□ -0.91
VRK2-209ENST00000478687 ABCA8O94911 1581 aa9.35□□□□□ -0.91
VRK2-209ENST00000478687 SMAPO00193 183 aa9.34□□□□□ -0.91
VRK2-209ENST00000478687 CDCA7LQ96GN5 454 aa9.34□□□□□ -0.91
VRK2-209ENST00000478687 CTTNBP2Q8WZ74 1663 aa9.34□□□□□ -0.91
VRK2-209ENST00000478687 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
VRK2-209ENST00000478687 FBXO41Q8TF61 875 aa9.33□□□□□ -0.92
VRK2-209ENST00000478687 PDZRN3Q9UPQ7 1066 aa9.33□□□□□ -0.92
VRK2-209ENST00000478687 PRIM1P49642 420 aaKnown RBP9.32□□□□□ -0.92
VRK2-209ENST00000478687 APLP1P51693 650 aa9.32□□□□□ -0.92
VRK2-209ENST00000478687 PRSS12P56730 875 aa9.32□□□□□ -0.92
VRK2-209ENST00000478687 NBR1Q14596 966 aa9.32□□□□□ -0.92
VRK2-209ENST00000478687 PDIA6Q15084 440 aa9.32□□□□□ -0.92
VRK2-209ENST00000478687 MAP3K7O43318 606 aa9.31□□□□□ -0.92
VRK2-209ENST00000478687 TRIM67Q6ZTA4 783 aa9.31□□□□□ -0.92
VRK2-209ENST00000478687 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
VRK2-209ENST00000478687 PTPRMP28827 1452 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms