RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 NLRP13Q86W25 1043 aa12□□□□□ -0.49
CDHR3-211ENST00000478080 KIF1BO60333 1816 aa12□□□□□ -0.49
CDHR3-211ENST00000478080 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
CDHR3-211ENST00000478080 LMTK2Q8IWU2 1503 aa11.99□□□□□ -0.49
CDHR3-211ENST00000478080 MAP3K4Q9Y6R4 1608 aa11.98□□□□□ -0.49
CDHR3-211ENST00000478080 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
CDHR3-211ENST00000478080 NOS1P29475 1434 aa11.98□□□□□ -0.49
CDHR3-211ENST00000478080 NEO1Q92859 1461 aa11.97□□□□□ -0.49
CDHR3-211ENST00000478080 SMG6Q86US8 1419 aaKnown RBP11.97□□□□□ -0.49
CDHR3-211ENST00000478080 SENP3Q9H4L4 574 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-211ENST00000478080 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
CDHR3-211ENST00000478080 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.49
CDHR3-211ENST00000478080 MYOM2P54296 1465 aa11.96□□□□□ -0.5
CDHR3-211ENST00000478080 ABCC3O15438 1527 aa11.96□□□□□ -0.5
CDHR3-211ENST00000478080 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
CDHR3-211ENST00000478080 KNSTRNQ9Y448 316 aa11.95□□□□□ -0.5
CDHR3-211ENST00000478080 NEURL4Q96JN8 1562 aa11.95□□□□□ -0.5
CDHR3-211ENST00000478080 DIP2CQ9Y2E4 1556 aa11.95□□□□□ -0.5
CDHR3-211ENST00000478080 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
CDHR3-211ENST00000478080 TMEM132EQ6IEE7 984 aa11.94□□□□□ -0.5
CDHR3-211ENST00000478080 ADGRB3O60242 1522 aa11.94□□□□□ -0.5
CDHR3-211ENST00000478080 EIF3AQ14152 1382 aaKnown RBP11.94□□□□□ -0.5
CDHR3-211ENST00000478080 SIGLEC1Q9BZZ2 1709 aa11.94□□□□□ -0.5
CDHR3-211ENST00000478080 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
CDHR3-211ENST00000478080 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
CDHR3-211ENST00000478080 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
CDHR3-211ENST00000478080 RICTORQ6R327 1708 aa11.93□□□□□ -0.5
CDHR3-211ENST00000478080 CDCA8Q53HL2 280 aa11.93□□□□□ -0.5
CDHR3-211ENST00000478080 B4GALNT3Q6L9W6 998 aa11.93□□□□□ -0.5
CDHR3-211ENST00000478080 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
CDHR3-211ENST00000478080 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
CDHR3-211ENST00000478080 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
CDHR3-211ENST00000478080 NRXN1Q9ULB1 1477 aa11.92□□□□□ -0.5
CDHR3-211ENST00000478080 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
CDHR3-211ENST00000478080 CAMSAP1Q5T5Y3 1602 aa11.92□□□□□ -0.5
CDHR3-211ENST00000478080 ERVK-7P63135 1459 aa11.92□□□□□ -0.5
CDHR3-211ENST00000478080 MYOM1P52179 1685 aa11.91□□□□□ -0.5
CDHR3-211ENST00000478080 PPP2R1AP30153 589 aa11.91□□□□□ -0.5
CDHR3-211ENST00000478080 SYNMO15061 1565 aa11.9□□□□□ -0.5
CDHR3-211ENST00000478080 IDI1Q13907 227 aa11.9□□□□□ -0.5
CDHR3-211ENST00000478080 CDCA7LQ96GN5 454 aa11.9□□□□□ -0.5
CDHR3-211ENST00000478080 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
CDHR3-211ENST00000478080 PPLO60437 1756 aa11.9□□□□□ -0.5
CDHR3-211ENST00000478080 CARD14Q9BXL6 1004 aa11.9□□□□□ -0.51
CDHR3-211ENST00000478080 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
CDHR3-211ENST00000478080 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
CDHR3-211ENST00000478080 ADAMTS8Q9UP79 889 aa11.89□□□□□ -0.51
CDHR3-211ENST00000478080 KDM5AP29375 1690 aaKnown RBP11.89□□□□□ -0.51
CDHR3-211ENST00000478080 ERICH6BQ5W0A0 696 aa11.89□□□□□ -0.51
CDHR3-211ENST00000478080 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
CDHR3-211ENST00000478080 RBM19Q9Y4C8 960 aaKnown RBP11.88□□□□□ -0.51
CDHR3-211ENST00000478080 ASXL1Q8IXJ9 1541 aa11.87□□□□□ -0.51
CDHR3-211ENST00000478080 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
CDHR3-211ENST00000478080 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
CDHR3-211ENST00000478080 GLI2P10070 1586 aa11.86□□□□□ -0.51
CDHR3-211ENST00000478080 ADGRB1O14514 1584 aa11.86□□□□□ -0.51
CDHR3-211ENST00000478080 BLMP54132 1417 aaPredicted RBP11.86□□□□□ -0.51
CDHR3-211ENST00000478080 RPGRIP1LQ68CZ1 1315 aa11.85□□□□□ -0.51
CDHR3-211ENST00000478080 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
CDHR3-211ENST00000478080 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
CDHR3-211ENST00000478080 PIK3C2BO00750 1634 aa11.85□□□□□ -0.51
CDHR3-211ENST00000478080 SETBP1Q9Y6X0 1596 aa11.85□□□□□ -0.51
CDHR3-211ENST00000478080 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDHR3-211ENST00000478080 NEXMIFQ5QGS0 1516 aa11.84□□□□□ -0.51
CDHR3-211ENST00000478080 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
CDHR3-211ENST00000478080 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-211ENST00000478080 WDR43Q15061 677 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDHR3-211ENST00000478080 STK26Q9P289 416 aa11.83□□□□□ -0.52
CDHR3-211ENST00000478080 ARHGAP31Q2M1Z3 1444 aa11.83□□□□□ -0.52
CDHR3-211ENST00000478080 MLECQ14165 292 aa11.83□□□□□ -0.52
CDHR3-211ENST00000478080 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
CDHR3-211ENST00000478080 MYO5BQ9ULV0 1848 aa11.83□□□□□ -0.52
CDHR3-211ENST00000478080 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
CDHR3-211ENST00000478080 CCDC146Q8IYE0 955 aa11.82□□□□□ -0.52
CDHR3-211ENST00000478080 SBNO2Q9Y2G9 1366 aa11.82□□□□□ -0.52
CDHR3-211ENST00000478080 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
CDHR3-211ENST00000478080 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
CDHR3-211ENST00000478080 RRP1P56182 461 aaKnown RBP11.81□□□□□ -0.52
CDHR3-211ENST00000478080 PDE3BQ13370 1112 aa11.81□□□□□ -0.52
CDHR3-211ENST00000478080 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
CDHR3-211ENST00000478080 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
CDHR3-211ENST00000478080 NPC1L1Q9UHC9 1359 aa11.8□□□□□ -0.52
CDHR3-211ENST00000478080 MSH5O43196 834 aa11.8□□□□□ -0.52
CDHR3-211ENST00000478080 PREX1Q8TCU6 1659 aa11.8□□□□□ -0.52
CDHR3-211ENST00000478080 PLEKHH1Q9ULM0 1364 aa11.8□□□□□ -0.52
CDHR3-211ENST00000478080 NSD3Q9BZ95 1437 aa11.79□□□□□ -0.52
CDHR3-211ENST00000478080 PLIN1O60240 522 aa11.79□□□□□ -0.52
CDHR3-211ENST00000478080 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
CDHR3-211ENST00000478080 ZMYM4Q5VZL5 1548 aa11.79□□□□□ -0.52
CDHR3-211ENST00000478080 CCDC136Q96JN2 1154 aa11.79□□□□□ -0.52
CDHR3-211ENST00000478080 EXOC6Q8TAG9 804 aa11.78□□□□□ -0.52
CDHR3-211ENST00000478080 INSRP06213 1382 aa11.78□□□□□ -0.52
CDHR3-211ENST00000478080 TMEM131LA2VDJ0 1609 aa11.78□□□□□ -0.52
CDHR3-211ENST00000478080 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.52
CDHR3-211ENST00000478080 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
CDHR3-211ENST00000478080 MORC1Q86VD1 984 aa11.76□□□□□ -0.53
CDHR3-211ENST00000478080 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
CDHR3-211ENST00000478080 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
CDHR3-211ENST00000478080 APAF1O14727 1248 aa11.76□□□□□ -0.53
CDHR3-211ENST00000478080 ANP32EQ9BTT0 268 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms