RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
NCKAP1-204ENST00000477988 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
NCKAP1-204ENST00000477988 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
NCKAP1-204ENST00000477988 EYA1Q99502 592 aa11.22□□□□□ -0.61
NCKAP1-204ENST00000477988 E2F4Q16254 413 aa11.21□□□□□ -0.61
NCKAP1-204ENST00000477988 BLOC1S3Q6QNY0 202 aa11.21□□□□□ -0.61
NCKAP1-204ENST00000477988 GDF9O60383 454 aa11.2□□□□□ -0.62
NCKAP1-204ENST00000477988 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
NCKAP1-204ENST00000477988 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
NCKAP1-204ENST00000477988 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
NCKAP1-204ENST00000477988 TLL1O43897 1013 aa11.17□□□□□ -0.62
NCKAP1-204ENST00000477988 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
NCKAP1-204ENST00000477988 FAM187AA6NFU0 413 aa11.16□□□□□ -0.62
NCKAP1-204ENST00000477988 PPEF1O14829 653 aaPredicted RBP11.16□□□□□ -0.62
NCKAP1-204ENST00000477988 BBXQ8WY36 941 aaPredicted RBP11.16□□□□□ -0.62
NCKAP1-204ENST00000477988 S1PR4O95977 384 aa11.14□□□□□ -0.63
NCKAP1-204ENST00000477988 AAASQ9NRG9 546 aa11.14□□□□□ -0.63
NCKAP1-204ENST00000477988 TNFRSF10AO00220 468 aa11.12□□□□□ -0.63
NCKAP1-204ENST00000477988 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
NCKAP1-204ENST00000477988 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
NCKAP1-204ENST00000477988 ADH1BP00325 375 aa11.07□□□□□ -0.64
NCKAP1-204ENST00000477988 DNAJB2P25686 324 aa11.07□□□□□ -0.64
NCKAP1-204ENST00000477988 PLA2G2CQ5R387 149 aa11.07□□□□□ -0.64
NCKAP1-204ENST00000477988 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
NCKAP1-204ENST00000477988 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
NCKAP1-204ENST00000477988 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
NCKAP1-204ENST00000477988 PKD2L1Q9P0L9 805 aa11.05□□□□□ -0.64
NCKAP1-204ENST00000477988 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
NCKAP1-204ENST00000477988 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
NCKAP1-204ENST00000477988 SLC6A16Q9GZN6 736 aa11.02□□□□□ -0.65
NCKAP1-204ENST00000477988 WDR70Q9NW82 654 aa11.02□□□□□ -0.65
NCKAP1-204ENST00000477988 CFHP08603 1231 aa11.01□□□□□ -0.65
NCKAP1-204ENST00000477988 DACH1Q9UI36 760 aa11.01□□□□□ -0.65
NCKAP1-204ENST00000477988 NR1I2O75469 434 aa11□□□□□ -0.65
NCKAP1-204ENST00000477988 WFS1O76024 890 aa11□□□□□ -0.65
NCKAP1-204ENST00000477988 AVPP01185 164 aa11□□□□□ -0.65
NCKAP1-204ENST00000477988 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
NCKAP1-204ENST00000477988 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
NCKAP1-204ENST00000477988 ADGRG1Q9Y653 693 aa10.99□□□□□ -0.65
NCKAP1-204ENST00000477988 SLC10A3P09131 477 aa10.98□□□□□ -0.65
NCKAP1-204ENST00000477988 STK17AQ9UEE5 414 aa10.98□□□□□ -0.65
NCKAP1-204ENST00000477988 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
NCKAP1-204ENST00000477988 FOXC1Q12948 553 aa10.97□□□□□ -0.65
NCKAP1-204ENST00000477988 PTGDRQ13258 359 aa10.97□□□□□ -0.65
NCKAP1-204ENST00000477988 TOR4AQ9NXH8 423 aa10.97□□□□□ -0.65
NCKAP1-204ENST00000477988 WIPF1O43516 503 aa10.96□□□□□ -0.65
NCKAP1-204ENST00000477988 NFX1Q12986 1120 aaKnown RBP10.96□□□□□ -0.65
NCKAP1-204ENST00000477988 SCUBE3Q8IX30 993 aa10.96□□□□□ -0.65
NCKAP1-204ENST00000477988 GMPR2Q9P2T1 348 aaKnown RBP10.96□□□□□ -0.65
NCKAP1-204ENST00000477988 RPIAP49247 311 aa10.94□□□□□ -0.66
NCKAP1-204ENST00000477988 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
NCKAP1-204ENST00000477988 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
NCKAP1-204ENST00000477988 C11orf95C9JLR9 678 aaPredicted RBP10.92□□□□□ -0.66
NCKAP1-204ENST00000477988 AXIN1O15169 862 aa10.92□□□□□ -0.66
NCKAP1-204ENST00000477988 SPSB2Q99619 263 aa10.91□□□□□ -0.66
NCKAP1-204ENST00000477988 MLLT3P42568 568 aaPredicted RBP10.9□□□□□ -0.66
NCKAP1-204ENST00000477988 INSM1Q01101 510 aaPredicted RBP10.89□□□□□ -0.67
NCKAP1-204ENST00000477988 FAM161AQ3B820 660 aa10.89□□□□□ -0.67
NCKAP1-204ENST00000477988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.88□□□□□ -0.67
NCKAP1-204ENST00000477988 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
NCKAP1-204ENST00000477988 LCE2CQ5TA81 110 aa10.87□□□□□ -0.67
NCKAP1-204ENST00000477988 CYP4X1Q8N118 509 aa10.87□□□□□ -0.67
NCKAP1-204ENST00000477988 CD2BP2O95400 341 aaKnown RBP10.86□□□□□ -0.67
NCKAP1-204ENST00000477988 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
NCKAP1-204ENST00000477988 AMER1Q5JTC6 1135 aaPredicted RBP10.84□□□□□ -0.67
NCKAP1-204ENST00000477988 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
NCKAP1-204ENST00000477988 FCF1Q9Y324 198 aaKnown RBP10.84□□□□□ -0.67
NCKAP1-204ENST00000477988 THAP11Q96EK4 314 aa10.83□□□□□ -0.68
NCKAP1-204ENST00000477988 PXYLP1Q8TE99 480 aa10.82□□□□□ -0.68
NCKAP1-204ENST00000477988 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
NCKAP1-204ENST00000477988 TERTO14746 1132 aaKnown RBP10.79□□□□□ -0.68
NCKAP1-204ENST00000477988 MORN1Q5T089 497 aa10.79□□□□□ -0.68
NCKAP1-204ENST00000477988 FAM160A2Q8N612 972 aaPredicted RBP10.79□□□□□ -0.68
NCKAP1-204ENST00000477988 SNRPBP14678 240 aaKnown RBP10.78□□□□□ -0.68
NCKAP1-204ENST00000477988 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
NCKAP1-204ENST00000477988 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
NCKAP1-204ENST00000477988 OATP04181 439 aa10.77□□□□□ -0.69
NCKAP1-204ENST00000477988 SMPD1P17405 629 aa10.77□□□□□ -0.69
NCKAP1-204ENST00000477988 NUTM2FA1L443 756 aa10.76□□□□□ -0.69
NCKAP1-204ENST00000477988 TTC24A2A3L6 582 aaPredicted RBP10.76□□□□□ -0.69
NCKAP1-204ENST00000477988 FCHSD2O94868 740 aa10.75□□□□□ -0.69
NCKAP1-204ENST00000477988 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
NCKAP1-204ENST00000477988 WNT7AO00755 349 aa10.74□□□□□ -0.69
NCKAP1-204ENST00000477988 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
NCKAP1-204ENST00000477988 METTL3Q86U44 580 aaKnown RBP10.73□□□□□ -0.69
NCKAP1-204ENST00000477988 SNIP1Q8TAD8 396 aaKnown RBP10.73□□□□□ -0.69
NCKAP1-204ENST00000477988 SENP2Q9HC62 589 aa10.73□□□□□ -0.69
NCKAP1-204ENST00000477988 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
NCKAP1-204ENST00000477988 FUT2Q10981 343 aa10.72□□□□□ -0.69
NCKAP1-204ENST00000477988 PRDM9Q9NQV7 894 aa10.72□□□□□ -0.69
NCKAP1-204ENST00000477988 SLC27A5Q9Y2P5 690 aa10.72□□□□□ -0.69
NCKAP1-204ENST00000477988 LOC100996750A0A140TA64 210 aa10.71□□□□□ -0.69
NCKAP1-204ENST00000477988 ATP6V1AP38606 617 aa10.71□□□□□ -0.69
NCKAP1-204ENST00000477988 KRTAP4-6Q9BYQ5 205 aa10.71□□□□□ -0.69
NCKAP1-204ENST00000477988 ZBTB24O43167 697 aaPredicted RBP10.7□□□□□ -0.7
NCKAP1-204ENST00000477988 BRICD5Q6PL45 260 aa10.7□□□□□ -0.7
NCKAP1-204ENST00000477988 MSS51Q4VC12 460 aa10.69□□□□□ -0.7
NCKAP1-204ENST00000477988 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
NCKAP1-204ENST00000477988 J3QL48 77 aa10.68□□□□□ -0.7
NCKAP1-204ENST00000477988 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms