RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 TOM1O60784 492 aa8.64□□□□□ -1.03
TRA2B-211ENST00000477939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.64□□□□□ -1.032e-9■□□□□ 8.6
TRA2B-211ENST00000477939 TET3O43151 1660 aa8.63□□□□□ -1.03
TRA2B-211ENST00000477939 UNC13BO14795 1591 aa8.63□□□□□ -1.03
TRA2B-211ENST00000477939 MYO5BQ9ULV0 1848 aa8.62□□□□□ -1.03
TRA2B-211ENST00000477939 TXNDC2Q86VQ3 553 aa8.62□□□□□ -1.03
TRA2B-211ENST00000477939 RPRD2Q5VT52 1461 aaKnown RBP8.62□□□□□ -1.03
TRA2B-211ENST00000477939 GCC2Q8IWJ2 1684 aa8.62□□□□□ -1.03
TRA2B-211ENST00000477939 ANKRD50Q9ULJ7 1429 aa8.62□□□□□ -1.03
TRA2B-211ENST00000477939 NWD1Q149M9 1564 aa8.61□□□□□ -1.03
TRA2B-211ENST00000477939 IDI1Q13907 227 aa8.6□□□□□ -1.03
TRA2B-211ENST00000477939 FAM50AQ14320 339 aaKnown RBP8.6□□□□□ -1.03
TRA2B-211ENST00000477939 E9PCH4 1651 aa8.59□□□□□ -1.03
TRA2B-211ENST00000477939 TMEM131LA2VDJ0 1609 aa8.59□□□□□ -1.03
TRA2B-211ENST00000477939 EID1Q9Y6B2 187 aa8.59□□□□□ -1.03
TRA2B-211ENST00000477939 ZFYVE9O95405 1425 aa8.59□□□□□ -1.03
TRA2B-211ENST00000477939 IQGAP3Q86VI3 1631 aa8.58□□□□□ -1.04
TRA2B-211ENST00000477939 NKTRP30414 1462 aaKnown RBP8.58□□□□□ -1.04
TRA2B-211ENST00000477939 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
TRA2B-211ENST00000477939 KLHL34Q8N239 644 aa8.58□□□□□ -1.04
TRA2B-211ENST00000477939 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
TRA2B-211ENST00000477939 TMEM94Q12767 1356 aa8.57□□□□□ -1.04
TRA2B-211ENST00000477939 ROCK1Q13464 1354 aa8.57□□□□□ -1.04
TRA2B-211ENST00000477939 SLC26A8Q96RN1 970 aa8.56□□□□□ -1.04
TRA2B-211ENST00000477939 SENP3Q9H4L4 574 aaPredicted RBP8.56□□□□□ -1.04
TRA2B-211ENST00000477939 SLC52A1Q9NWF4 448 aa8.56□□□□□ -1.04
TRA2B-211ENST00000477939 CHD2O14647 1828 aaKnown RBP8.56□□□□□ -1.04
TRA2B-211ENST00000477939 ROBO1Q9Y6N7 1651 aa8.56□□□□□ -1.04
TRA2B-211ENST00000477939 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
TRA2B-211ENST00000477939 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
TRA2B-211ENST00000477939 PLEKHG1Q9ULL1 1385 aa8.55□□□□□ -1.04
TRA2B-211ENST00000477939 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
TRA2B-211ENST00000477939 KCNA6P17658 529 aa8.54□□□□□ -1.04
TRA2B-211ENST00000477939 ERICH6BQ5W0A0 696 aa8.54□□□□□ -1.04
TRA2B-211ENST00000477939 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
TRA2B-211ENST00000477939 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
TRA2B-211ENST00000477939 SPHKAPQ2M3C7 1700 aa8.53□□□□□ -1.04
TRA2B-211ENST00000477939 ADAMTS13Q76LX8 1427 aa8.53□□□□□ -1.04
TRA2B-211ENST00000477939 DIP2AQ14689 1571 aa8.52□□□□□ -1.04
TRA2B-211ENST00000477939 PDIA4P13667 645 aaKnown RBP8.52□□□□□ -1.05
TRA2B-211ENST00000477939 NRXN3Q9Y4C0 1643 aa8.51□□□□□ -1.05
TRA2B-211ENST00000477939 PHF23Q9BUL5 403 aaPredicted RBP8.51□□□□□ -1.05
TRA2B-211ENST00000477939 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
TRA2B-211ENST00000477939 NUP155O75694 1391 aa8.5□□□□□ -1.05
TRA2B-211ENST00000477939 MSH6P52701 1360 aa8.5□□□□□ -1.05
TRA2B-211ENST00000477939 PHLPP1O60346 1717 aa8.5□□□□□ -1.05
TRA2B-211ENST00000477939 PPP1R15AO75807 674 aaPredicted RBP8.5□□□□□ -1.05
TRA2B-211ENST00000477939 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
TRA2B-211ENST00000477939 COL16A1Q07092 1604 aaPredicted RBP8.5□□□□□ -1.05
TRA2B-211ENST00000477939 XRN1Q8IZH2 1706 aaKnown RBP8.49□□□□□ -1.05
TRA2B-211ENST00000477939 ITGAEP38570 1179 aa8.49□□□□□ -1.05
TRA2B-211ENST00000477939 PPARGC1BQ86YN6 1023 aaKnown RBP8.49□□□□□ -1.05
TRA2B-211ENST00000477939 BCANQ96GW7 911 aa8.49□□□□□ -1.05
TRA2B-211ENST00000477939 RGS17Q9UGC6 210 aaPredicted RBP8.49□□□□□ -1.05
TRA2B-211ENST00000477939 CLTCL1P53675 1640 aa8.49□□□□□ -1.05
TRA2B-211ENST00000477939 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
TRA2B-211ENST00000477939 TRPM2O94759 1503 aa8.49□□□□□ -1.05
TRA2B-211ENST00000477939 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.49□□□□□ -1.05
TRA2B-211ENST00000477939 SETBP1Q9Y6X0 1596 aa8.48□□□□□ -1.05
TRA2B-211ENST00000477939 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
TRA2B-211ENST00000477939 CHGAP10645 457 aaKnown RBP8.48□□□□□ -1.05
TRA2B-211ENST00000477939 ZEB1P37275 1124 aaPredicted RBP8.48□□□□□ -1.05
TRA2B-211ENST00000477939 NUTM2DQ5VT03 806 aaPredicted RBP8.48□□□□□ -1.05
TRA2B-211ENST00000477939 PIK3R4Q99570 1358 aa8.48□□□□□ -1.05
TRA2B-211ENST00000477939 PTPRUQ92729 1446 aa8.47□□□□□ -1.05
TRA2B-211ENST00000477939 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
TRA2B-211ENST00000477939 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRA2B-211ENST00000477939 TBX22Q9Y458 520 aa8.47□□□□□ -1.05
TRA2B-211ENST00000477939 AHDC1Q5TGY3 1603 aaPredicted RBP8.47□□□□□ -1.05
TRA2B-211ENST00000477939 NCOA3Q9Y6Q9 1424 aa8.46□□□□□ -1.05
TRA2B-211ENST00000477939 NEXMIFQ5QGS0 1516 aa8.46□□□□□ -1.05
TRA2B-211ENST00000477939 SLAIN2Q9P270 581 aa8.46□□□□□ -1.06
TRA2B-211ENST00000477939 NAIPQ13075 1403 aa8.46□□□□□ -1.06
TRA2B-211ENST00000477939 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
TRA2B-211ENST00000477939 TAOK2Q9UL54 1235 aa8.45□□□□□ -1.06
TRA2B-211ENST00000477939 LRP6O75581 1613 aa8.44□□□□□ -1.06
TRA2B-211ENST00000477939 SHPRHQ149N8 1683 aa8.44□□□□□ -1.06
TRA2B-211ENST00000477939 SETD1AO15047 1707 aaKnown RBP8.44□□□□□ -1.06
TRA2B-211ENST00000477939 NALCNQ8IZF0 1738 aa8.44□□□□□ -1.06
TRA2B-211ENST00000477939 KIF1BO60333 1816 aa8.44□□□□□ -1.06
TRA2B-211ENST00000477939 JCADQ9P266 1359 aa8.44□□□□□ -1.06
TRA2B-211ENST00000477939 DCCP43146 1447 aa8.44□□□□□ -1.06
TRA2B-211ENST00000477939 PDE4CQ08493 712 aa8.43□□□□□ -1.06
TRA2B-211ENST00000477939 METP08581 1390 aa8.43□□□□□ -1.06
TRA2B-211ENST00000477939 HFM1A2PYH4 1435 aa8.43□□□□□ -1.06
TRA2B-211ENST00000477939 TAF7LQ5H9L4 462 aa8.42□□□□□ -1.06
TRA2B-211ENST00000477939 POTEAQ6S8J7 498 aa8.42□□□□□ -1.06
TRA2B-211ENST00000477939 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
TRA2B-211ENST00000477939 AMOTL2Q9Y2J4 779 aa8.42□□□□□ -1.06
TRA2B-211ENST00000477939 ASXL1Q8IXJ9 1541 aa8.42□□□□□ -1.06
TRA2B-211ENST00000477939 NHSL1Q5SYE7 1610 aa8.42□□□□□ -1.06
TRA2B-211ENST00000477939 MST1RQ04912 1400 aa8.41□□□□□ -1.06
TRA2B-211ENST00000477939 CADPS2Q86UW7 1296 aa8.41□□□□□ -1.06
TRA2B-211ENST00000477939 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
TRA2B-211ENST00000477939 PPLO60437 1756 aa8.4□□□□□ -1.06
TRA2B-211ENST00000477939 ADGRL3Q9HAR2 1447 aa8.4□□□□□ -1.06
TRA2B-211ENST00000477939 ATF3P18847 181 aa8.4□□□□□ -1.06
TRA2B-211ENST00000477939 ZNF326Q5BKZ1 582 aaKnown RBP8.4□□□□□ -1.06
TRA2B-211ENST00000477939 GLIPR1L2Q4G1C9 344 aa8.39□□□□□ -1.07
TRA2B-211ENST00000477939 BRINP3Q76B58 766 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms