RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
SPTAN1-207ENST00000476825 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
SPTAN1-207ENST00000476825 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
SPTAN1-207ENST00000476825 MED14O60244 1454 aa13.36□□□□□ -0.27
SPTAN1-207ENST00000476825 MYOM2P54296 1465 aa13.36□□□□□ -0.27
SPTAN1-207ENST00000476825 SCAF11Q99590 1463 aaKnown RBP13.36□□□□□ -0.27
SPTAN1-207ENST00000476825 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
SPTAN1-207ENST00000476825 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
SPTAN1-207ENST00000476825 LAMC1P11047 1609 aa13.35□□□□□ -0.27
SPTAN1-207ENST00000476825 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
SPTAN1-207ENST00000476825 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.27
SPTAN1-207ENST00000476825 HSPA2P54652 639 aa13.33□□□□□ -0.28
SPTAN1-207ENST00000476825 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
SPTAN1-207ENST00000476825 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
SPTAN1-207ENST00000476825 STRCP1A6NGW2 1772 aa13.31□□□□□ -0.28
SPTAN1-207ENST00000476825 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
SPTAN1-207ENST00000476825 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
SPTAN1-207ENST00000476825 CHD2O14647 1828 aaKnown RBP13.3□□□□□ -0.28
SPTAN1-207ENST00000476825 TRPM1Q7Z4N2 1603 aa13.3□□□□□ -0.28
SPTAN1-207ENST00000476825 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
SPTAN1-207ENST00000476825 NPHP4O75161 1426 aaPredicted RBP13.29□□□□□ -0.28
SPTAN1-207ENST00000476825 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
SPTAN1-207ENST00000476825 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
SPTAN1-207ENST00000476825 NWD1Q149M9 1564 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 KNDC1Q76NI1 1749 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 XRN1Q8IZH2 1706 aaKnown RBP13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 LTKP29376 864 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
SPTAN1-207ENST00000476825 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
SPTAN1-207ENST00000476825 CCER1Q8TC90 406 aaPredicted RBP13.25□□□□□ -0.29
SPTAN1-207ENST00000476825 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
SPTAN1-207ENST00000476825 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
SPTAN1-207ENST00000476825 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
SPTAN1-207ENST00000476825 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
SPTAN1-207ENST00000476825 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
SPTAN1-207ENST00000476825 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
SPTAN1-207ENST00000476825 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
SPTAN1-207ENST00000476825 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
SPTAN1-207ENST00000476825 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
SPTAN1-207ENST00000476825 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
SPTAN1-207ENST00000476825 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
SPTAN1-207ENST00000476825 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPTAN1-207ENST00000476825 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
SPTAN1-207ENST00000476825 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
SPTAN1-207ENST00000476825 EID1Q9Y6B2 187 aa13.21□□□□□ -0.29
SPTAN1-207ENST00000476825 LTBP4Q8N2S1 1624 aa13.2□□□□□ -0.3
SPTAN1-207ENST00000476825 CPS1P31327 1500 aa13.19□□□□□ -0.3
SPTAN1-207ENST00000476825 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-207ENST00000476825 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
SPTAN1-207ENST00000476825 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-207ENST00000476825 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
SPTAN1-207ENST00000476825 DCAF11Q8TEB1 546 aa13.18□□□□□ -0.3
SPTAN1-207ENST00000476825 STAC3Q96MF2 364 aa13.18□□□□□ -0.3
SPTAN1-207ENST00000476825 PTPRUQ92729 1446 aa13.17□□□□□ -0.3
SPTAN1-207ENST00000476825 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
SPTAN1-207ENST00000476825 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
SPTAN1-207ENST00000476825 METP08581 1390 aa13.16□□□□□ -0.3
SPTAN1-207ENST00000476825 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
SPTAN1-207ENST00000476825 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-207ENST00000476825 TECPR2O15040 1411 aa13.14□□□□□ -0.31
SPTAN1-207ENST00000476825 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
SPTAN1-207ENST00000476825 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
SPTAN1-207ENST00000476825 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
SPTAN1-207ENST00000476825 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
SPTAN1-207ENST00000476825 QRICH2Q9H0J4 1663 aa13.13□□□□□ -0.31
SPTAN1-207ENST00000476825 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
SPTAN1-207ENST00000476825 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
SPTAN1-207ENST00000476825 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
SPTAN1-207ENST00000476825 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
SPTAN1-207ENST00000476825 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
SPTAN1-207ENST00000476825 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
SPTAN1-207ENST00000476825 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
SPTAN1-207ENST00000476825 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
SPTAN1-207ENST00000476825 LRRC7Q96NW7 1537 aa13.1□□□□□ -0.31
SPTAN1-207ENST00000476825 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
SPTAN1-207ENST00000476825 LRPPRCP42704 1394 aaKnown RBP13.09□□□□□ -0.31
SPTAN1-207ENST00000476825 ADGRB2O60241 1585 aa13.09□□□□□ -0.31
SPTAN1-207ENST00000476825 FBXO41Q8TF61 875 aa13.08□□□□□ -0.32
SPTAN1-207ENST00000476825 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
SPTAN1-207ENST00000476825 BCANQ96GW7 911 aa13.07□□□□□ -0.32
SPTAN1-207ENST00000476825 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
SPTAN1-207ENST00000476825 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
SPTAN1-207ENST00000476825 KCNA6P17658 529 aa13.06□□□□□ -0.32
SPTAN1-207ENST00000476825 NBPF1Q3BBV0 1214 aa13.06□□□□□ -0.32
SPTAN1-207ENST00000476825 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
SPTAN1-207ENST00000476825 CDC42BPGQ6DT37 1551 aa13.06□□□□□ -0.32
SPTAN1-207ENST00000476825 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
SPTAN1-207ENST00000476825 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
SPTAN1-207ENST00000476825 ROCK2O75116 1388 aaKnown RBP13.05□□□□□ -0.32
SPTAN1-207ENST00000476825 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-207ENST00000476825 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
SPTAN1-207ENST00000476825 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
SPTAN1-207ENST00000476825 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
SPTAN1-207ENST00000476825 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
SPTAN1-207ENST00000476825 NCOA3Q9Y6Q9 1424 aa13.02□□□□□ -0.33
SPTAN1-207ENST00000476825 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms