RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 TTBK1Q5TCY1 1321 aaPredicted RBP13.45□□□□□ -0.26
CHD6-207ENST00000476641 LAPTM4BQ86VI4 370 aa13.45□□□□□ -0.26
CHD6-207ENST00000476641 KIAA1468Q9P260 1216 aa13.45□□□□□ -0.26
CHD6-207ENST00000476641 SOWAHBA6NEL2 793 aa13.42□□□□□ -0.26
CHD6-207ENST00000476641 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
CHD6-207ENST00000476641 EPAS1Q99814 870 aa13.42□□□□□ -0.26
CHD6-207ENST00000476641 DPYSL4O14531 572 aa13.41□□□□□ -0.26
CHD6-207ENST00000476641 ITGBL1O95965 494 aaPredicted RBP13.41□□□□□ -0.26
CHD6-207ENST00000476641 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
CHD6-207ENST00000476641 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
CHD6-207ENST00000476641 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
CHD6-207ENST00000476641 SEPT9Q9UHD8 586 aaPredicted RBP13.4□□□□□ -0.26
CHD6-207ENST00000476641 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
CHD6-207ENST00000476641 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
CHD6-207ENST00000476641 WBP1LQ9NX94 342 aa13.37□□□□□ -0.27
CHD6-207ENST00000476641 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
CHD6-207ENST00000476641 PTPRGP23470 1445 aa13.36□□□□□ -0.27
CHD6-207ENST00000476641 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
CHD6-207ENST00000476641 DISP1Q96F81 1524 aa13.35□□□□□ -0.27
CHD6-207ENST00000476641 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
CHD6-207ENST00000476641 NYAP1Q6ZVC0 841 aa13.35□□□□□ -0.27
CHD6-207ENST00000476641 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
CHD6-207ENST00000476641 DDX12PQ92771 950 aa13.34□□□□□ -0.27
CHD6-207ENST00000476641 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
CHD6-207ENST00000476641 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
CHD6-207ENST00000476641 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
CHD6-207ENST00000476641 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
CHD6-207ENST00000476641 UGGT2Q9NYU1 1516 aa13.3□□□□□ -0.28
CHD6-207ENST00000476641 KCNC4Q03721 635 aa13.3□□□□□ -0.28
CHD6-207ENST00000476641 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.29□□□□□ -0.28
CHD6-207ENST00000476641 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
CHD6-207ENST00000476641 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
CHD6-207ENST00000476641 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
CHD6-207ENST00000476641 TSR3Q9UJK0 312 aaKnown RBP13.27□□□□□ -0.29
CHD6-207ENST00000476641 KIAA0556O60303 1618 aa13.26□□□□□ -0.29
CHD6-207ENST00000476641 NBR1Q14596 966 aa13.26□□□□□ -0.29
CHD6-207ENST00000476641 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
CHD6-207ENST00000476641 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
CHD6-207ENST00000476641 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
CHD6-207ENST00000476641 MAP3K7O43318 606 aa13.24□□□□□ -0.29
CHD6-207ENST00000476641 EN1Q05925 392 aaPredicted RBP13.24□□□□□ -0.29
CHD6-207ENST00000476641 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
CHD6-207ENST00000476641 PACS2Q86VP3 889 aa13.24□□□□□ -0.29
CHD6-207ENST00000476641 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
CHD6-207ENST00000476641 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
CHD6-207ENST00000476641 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
CHD6-207ENST00000476641 TSKSQ9UJT2 592 aa13.23□□□□□ -0.29
CHD6-207ENST00000476641 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
CHD6-207ENST00000476641 DIP2BQ9P265 1576 aa13.22□□□□□ -0.29
CHD6-207ENST00000476641 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
CHD6-207ENST00000476641 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
CHD6-207ENST00000476641 PDIA6Q15084 440 aa13.21□□□□□ -0.29
CHD6-207ENST00000476641 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.3
CHD6-207ENST00000476641 ASXL2Q76L83 1435 aa13.21□□□□□ -0.3
CHD6-207ENST00000476641 Q6ZNB5 142 aa13.2□□□□□ -0.3
CHD6-207ENST00000476641 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
CHD6-207ENST00000476641 EEA1Q15075 1411 aa13.19□□□□□ -0.3
CHD6-207ENST00000476641 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
CHD6-207ENST00000476641 KDM5BQ9UGL1 1544 aa13.17□□□□□ -0.3
CHD6-207ENST00000476641 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
CHD6-207ENST00000476641 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
CHD6-207ENST00000476641 PPP4CP60510 307 aa13.16□□□□□ -0.3
CHD6-207ENST00000476641 SMAPO00193 183 aa13.15□□□□□ -0.3
CHD6-207ENST00000476641 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
CHD6-207ENST00000476641 ABCA8O94911 1581 aa13.14□□□□□ -0.31
CHD6-207ENST00000476641 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
CHD6-207ENST00000476641 PRSS12P56730 875 aa13.13□□□□□ -0.31
CHD6-207ENST00000476641 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
CHD6-207ENST00000476641 FAM198AQ9UFP1 575 aa13.12□□□□□ -0.31
CHD6-207ENST00000476641 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
CHD6-207ENST00000476641 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
CHD6-207ENST00000476641 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
CHD6-207ENST00000476641 SAMD9Q5K651 1589 aa13.1□□□□□ -0.31
CHD6-207ENST00000476641 PRIM1P49642 420 aaKnown RBP13.09□□□□□ -0.31
CHD6-207ENST00000476641 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
CHD6-207ENST00000476641 KIF21BO75037 1637 aa13.09□□□□□ -0.31
CHD6-207ENST00000476641 GRXCR2A6NFK2 248 aa13.08□□□□□ -0.32
CHD6-207ENST00000476641 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
CHD6-207ENST00000476641 WDR7Q9Y4E6 1490 aa13.08□□□□□ -0.32
CHD6-207ENST00000476641 GLI2P10070 1586 aa13.07□□□□□ -0.32
CHD6-207ENST00000476641 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
CHD6-207ENST00000476641 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
CHD6-207ENST00000476641 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
CHD6-207ENST00000476641 E2F4Q16254 413 aa13.07□□□□□ -0.32
CHD6-207ENST00000476641 TATDN2Q93075 761 aa13.07□□□□□ -0.32
CHD6-207ENST00000476641 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
CHD6-207ENST00000476641 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
CHD6-207ENST00000476641 ATP10BO94823 1461 aa13.06□□□□□ -0.32
CHD6-207ENST00000476641 LAPTM4AQ15012 233 aa13.06□□□□□ -0.32
CHD6-207ENST00000476641 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
CHD6-207ENST00000476641 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
CHD6-207ENST00000476641 KDM6BO15054 1643 aa13.04□□□□□ -0.32
CHD6-207ENST00000476641 MTRQ99707 1265 aa13.04□□□□□ -0.32
CHD6-207ENST00000476641 GFRA3O60609 400 aa13.03□□□□□ -0.32
CHD6-207ENST00000476641 IL21Q9HBE4 155 aa13.03□□□□□ -0.32
CHD6-207ENST00000476641 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
CHD6-207ENST00000476641 RNF40O75150 1001 aa13.02□□□□□ -0.33
CHD6-207ENST00000476641 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
CHD6-207ENST00000476641 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
CHD6-207ENST00000476641 ARIH1Q9Y4X5 557 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms