RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 PRKRIP1Q9H875 184 aaPredicted RBP31.89■■■□□ 2.69
CCDC7-206ENST00000476558 PREX1Q8TCU6 1659 aa31.88■■■□□ 2.69
CCDC7-206ENST00000476558 RPGRIP1LQ68CZ1 1315 aa31.87■■■□□ 2.69
CCDC7-206ENST00000476558 SCAF11Q99590 1463 aaKnown RBP31.86■■■□□ 2.69
CCDC7-206ENST00000476558 SCAF1Q9H7N4 1312 aaKnown RBP31.85■■■□□ 2.69
CCDC7-206ENST00000476558 POLR3GLQ9BT43 218 aa31.82■■■□□ 2.68
CCDC7-206ENST00000476558 SLC52A1Q9NWF4 448 aa31.82■■■□□ 2.68
CCDC7-206ENST00000476558 CHGAP10645 457 aaKnown RBP31.8■■■□□ 2.68
CCDC7-206ENST00000476558 DISP3Q9P2K9 1392 aa31.8■■■□□ 2.68
CCDC7-206ENST00000476558 IDI1Q13907 227 aa31.79■■■□□ 2.68
CCDC7-206ENST00000476558 CFAP70Q5T0N1 1121 aa31.79■■■□□ 2.68
CCDC7-206ENST00000476558 PIK3C2GO75747 1445 aa31.78■■■□□ 2.68
CCDC7-206ENST00000476558 SETBP1Q9Y6X0 1596 aa31.77■■■□□ 2.68
CCDC7-206ENST00000476558 CLTCQ00610 1675 aaKnown RBP31.76■■■□□ 2.68
CCDC7-206ENST00000476558 ERVK-7P63135 1459 aa31.76■■■□□ 2.67
CCDC7-206ENST00000476558 NEXMIFQ5QGS0 1516 aa31.76■■■□□ 2.67
CCDC7-206ENST00000476558 TMF1P82094 1093 aa31.74■■■□□ 2.67
CCDC7-206ENST00000476558 TMEM131LA2VDJ0 1609 aa31.73■■■□□ 2.67
CCDC7-206ENST00000476558 FBXO31Q5XUX0 539 aaPredicted RBP31.71■■■□□ 2.67
CCDC7-206ENST00000476558 C14orf93Q9H972 538 aaKnown RBP31.71■■■□□ 2.67
CCDC7-206ENST00000476558 EIF3AQ14152 1382 aaKnown RBP31.7■■■□□ 2.67
CCDC7-206ENST00000476558 ZFYVE9O95405 1425 aa31.69■■■□□ 2.66
CCDC7-206ENST00000476558 MYO5BQ9ULV0 1848 aa31.68■■■□□ 2.66
CCDC7-206ENST00000476558 SPATA31D1Q6ZQQ2 1576 aa31.68■■■□□ 2.66
CCDC7-206ENST00000476558 CCDC184Q52MB2 194 aa31.67■■■□□ 2.66
CCDC7-206ENST00000476558 ADGRB1O14514 1584 aa31.67■■■□□ 2.66
CCDC7-206ENST00000476558 VGFO15240 615 aaPredicted RBP31.65■■■□□ 2.66
CCDC7-206ENST00000476558 MYO3AQ8NEV4 1616 aa31.65■■■□□ 2.66
CCDC7-206ENST00000476558 GTF3C3Q9Y5Q9 886 aa31.63■■■□□ 2.65
CCDC7-206ENST00000476558 PER1O15534 1290 aaPredicted RBP31.63■■■□□ 2.65
CCDC7-206ENST00000476558 MLECQ14165 292 aa31.61■■■□□ 2.65
CCDC7-206ENST00000476558 KTN1Q86UP2 1357 aaKnown RBP31.59■■■□□ 2.65
CCDC7-206ENST00000476558 SLC24A1O60721 1099 aa31.59■■■□□ 2.65
CCDC7-206ENST00000476558 SBNO2Q9Y2G9 1366 aa31.57■■■□□ 2.65
CCDC7-206ENST00000476558 CDCA8Q53HL2 280 aa31.57■■■□□ 2.64
CCDC7-206ENST00000476558 MRS2Q9HD23 443 aa31.55■■■□□ 2.64
CCDC7-206ENST00000476558 ZMYM3Q14202 1370 aa31.54■■■□□ 2.64
CCDC7-206ENST00000476558 RALBP1Q15311 655 aa31.52■■■□□ 2.64
CCDC7-206ENST00000476558 NUTM2DQ5VT03 806 aaPredicted RBP31.52■■■□□ 2.64
CCDC7-206ENST00000476558 PANK3Q9H999 370 aa31.52■■■□□ 2.64
CCDC7-206ENST00000476558 KDM5AP29375 1690 aaKnown RBP31.5■■■□□ 2.63
CCDC7-206ENST00000476558 A2ML1A8K2U0 1454 aa31.49■■■□□ 2.63
CCDC7-206ENST00000476558 MYOM1P52179 1685 aa31.49■■■□□ 2.63
CCDC7-206ENST00000476558 TMEM132EQ6IEE7 984 aa31.49■■■□□ 2.63
CCDC7-206ENST00000476558 PARD3Q8TEW0 1356 aa31.48■■■□□ 2.63
CCDC7-206ENST00000476558 CENPJQ9HC77 1338 aaPredicted RBP31.48■■■□□ 2.63
CCDC7-206ENST00000476558 ESF1Q9H501 851 aaKnown RBP31.47■■■□□ 2.63
CCDC7-206ENST00000476558 TRAK1Q9UPV9 953 aa31.45■■■□□ 2.63
CCDC7-206ENST00000476558 ASXL1Q8IXJ9 1541 aa31.44■■■□□ 2.62
CCDC7-206ENST00000476558 QRICH2Q9H0J4 1663 aa31.44■■■□□ 2.62
CCDC7-206ENST00000476558 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
CCDC7-206ENST00000476558 MYBBP1AQ9BQG0 1328 aaKnown RBP31.44■■■□□ 2.62
CCDC7-206ENST00000476558 ARHGEF28Q8N1W1 1705 aaKnown RBP31.43■■■□□ 2.62
CCDC7-206ENST00000476558 CNGB1Q14028 1251 aaPredicted RBP31.42■■■□□ 2.62
CCDC7-206ENST00000476558 STAG3Q9UJ98 1225 aa31.4■■■□□ 2.62
CCDC7-206ENST00000476558 BRD4O60885 1362 aaPredicted RBP31.39■■■□□ 2.62
CCDC7-206ENST00000476558 FAM9BQ8IZU0 186 aa31.39■■■□□ 2.62
CCDC7-206ENST00000476558 HNRNPUQ00839 825 aaKnown RBP eCLIP31.38■■■□□ 2.61
CCDC7-206ENST00000476558 ALKQ9UM73 1620 aa31.37■■■□□ 2.61
CCDC7-206ENST00000476558 RIMS2Q9UQ26 1411 aa31.35■■■□□ 2.61
CCDC7-206ENST00000476558 TNRQ92752 1358 aa31.35■■■□□ 2.61
CCDC7-206ENST00000476558 PNISRQ8TF01 805 aaKnown RBP31.34■■■□□ 2.61
CCDC7-206ENST00000476558 TMC1Q8TDI8 760 aa31.31■■■□□ 2.6
CCDC7-206ENST00000476558 NLRP13Q86W25 1043 aa31.31■■■□□ 2.6
CCDC7-206ENST00000476558 AMER1Q5JTC6 1135 aaPredicted RBP31.3■■■□□ 2.6
CCDC7-206ENST00000476558 DNAJC5Q9H3Z4 198 aa31.3■■■□□ 2.6
CCDC7-206ENST00000476558 NPC1L1Q9UHC9 1359 aa31.3■■■□□ 2.6
CCDC7-206ENST00000476558 CC2D1BQ5T0F9 858 aaKnown RBP31.29■■■□□ 2.6
CCDC7-206ENST00000476558 KNSTRNQ9Y448 316 aa31.29■■■□□ 2.6
CCDC7-206ENST00000476558 SETD1AO15047 1707 aaKnown RBP31.29■■■□□ 2.6
CCDC7-206ENST00000476558 PUS7Q96PZ0 661 aaKnown RBP31.28■■■□□ 2.6
CCDC7-206ENST00000476558 YTHDC2Q9H6S0 1430 aaKnown RBP31.28■■■□□ 2.6
CCDC7-206ENST00000476558 PTPRMP28827 1452 aa31.28■■■□□ 2.6
CCDC7-206ENST00000476558 LRPPRCP42704 1394 aaKnown RBP31.26■■■□□ 2.6
CCDC7-206ENST00000476558 UBR1Q8IWV7 1749 aa31.26■■■□□ 2.6
CCDC7-206ENST00000476558 TULP4Q9NRJ4 1543 aa31.25■■■□□ 2.59
CCDC7-206ENST00000476558 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.24■■■□□ 2.59
CCDC7-206ENST00000476558 NRXN3Q9Y4C0 1643 aa31.23■■■□□ 2.59
CCDC7-206ENST00000476558 C3P01024 1663 aa31.23■■■□□ 2.59
CCDC7-206ENST00000476558 ZBED9Q6R2W3 1325 aa31.22■■■□□ 2.59
CCDC7-206ENST00000476558 FER1L4A9Z1Z3 1794 aa31.21■■■□□ 2.59
CCDC7-206ENST00000476558 NLRP1Q9C000 1473 aa31.21■■■□□ 2.59
CCDC7-206ENST00000476558 EVC2Q86UK5 1308 aa31.2■■■□□ 2.59
CCDC7-206ENST00000476558 CARD14Q9BXL6 1004 aa31.19■■■□□ 2.58
CCDC7-206ENST00000476558 SENP3Q9H4L4 574 aaPredicted RBP31.19■■■□□ 2.58
CCDC7-206ENST00000476558 STK26Q9P289 416 aa31.19■■■□□ 2.58
CCDC7-206ENST00000476558 DLC1Q96QB1 1528 aa31.18■■■□□ 2.58
CCDC7-206ENST00000476558 TMEM2Q9UHN6 1383 aa31.17■■■□□ 2.58
CCDC7-206ENST00000476558 HDGFP51858 240 aaKnown RBP31.16■■■□□ 2.58
CCDC7-206ENST00000476558 CEBPAP49715 358 aaPredicted RBP31.15■■■□□ 2.58
CCDC7-206ENST00000476558 PRAM1Q96QH2 718 aa31.12■■■□□ 2.57
CCDC7-206ENST00000476558 SLC12A5Q9H2X9 1139 aa31.12■■■□□ 2.57
CCDC7-206ENST00000476558 ABCC11Q96J66 1382 aa31.11■■■□□ 2.57
CCDC7-206ENST00000476558 PPP2R1AP30153 589 aa31.1■■■□□ 2.57
CCDC7-206ENST00000476558 INSRP06213 1382 aa31.08■■■□□ 2.57
CCDC7-206ENST00000476558 SAFB2Q14151 953 aaKnown RBP eCLIP31.08■■■□□ 2.57
CCDC7-206ENST00000476558 USP32Q8NFA0 1604 aa31.07■■■□□ 2.56
CCDC7-206ENST00000476558 POGKQ9P215 609 aa31.07■■■□□ 2.56
CCDC7-206ENST00000476558 METP08581 1390 aa31.06■■■□□ 2.56
CCDC7-206ENST00000476558 CABP2Q9NPB3 220 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms