RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 CHGAP10645 457 aaKnown RBP14.23□□□□□ -0.13
TMEM254-211ENST00000476173 KIF1BO60333 1816 aa14.22□□□□□ -0.13
TMEM254-211ENST00000476173 ADGRB3O60242 1522 aa14.22□□□□□ -0.13
TMEM254-211ENST00000476173 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
TMEM254-211ENST00000476173 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.13
TMEM254-211ENST00000476173 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
TMEM254-211ENST00000476173 ZNF142P52746 1687 aaPredicted RBP14.21□□□□□ -0.13
TMEM254-211ENST00000476173 MYO5BQ9ULV0 1848 aa14.2□□□□□ -0.14
TMEM254-211ENST00000476173 RGL3Q3MIN7 710 aa14.2□□□□□ -0.14
TMEM254-211ENST00000476173 NEURL4Q96JN8 1562 aa14.2□□□□□ -0.14
TMEM254-211ENST00000476173 MYCNP04198 464 aaPredicted RBP14.19□□□□□ -0.14
TMEM254-211ENST00000476173 THEMISQ8N1K5 641 aaPredicted RBP14.19□□□□□ -0.14
TMEM254-211ENST00000476173 LMTK3Q96Q04 1460 aa14.18□□□□□ -0.14
TMEM254-211ENST00000476173 ZNF326Q5BKZ1 582 aaKnown RBP14.17□□□□□ -0.14
TMEM254-211ENST00000476173 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
TMEM254-211ENST00000476173 RPGRIP1LQ68CZ1 1315 aa14.16□□□□□ -0.14
TMEM254-211ENST00000476173 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
TMEM254-211ENST00000476173 L3MBTL2Q969R5 705 aa14.15□□□□□ -0.14
TMEM254-211ENST00000476173 SLIT1O75093 1534 aa14.15□□□□□ -0.14
TMEM254-211ENST00000476173 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
TMEM254-211ENST00000476173 HSPA2P54652 639 aa14.14□□□□□ -0.15
TMEM254-211ENST00000476173 RIMS2Q9UQ26 1411 aa14.14□□□□□ -0.15
TMEM254-211ENST00000476173 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
TMEM254-211ENST00000476173 LTKP29376 864 aa14.13□□□□□ -0.15
TMEM254-211ENST00000476173 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
TMEM254-211ENST00000476173 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
TMEM254-211ENST00000476173 NEXMIFQ5QGS0 1516 aa14.13□□□□□ -0.15
TMEM254-211ENST00000476173 PPLO60437 1756 aa14.12□□□□□ -0.15
TMEM254-211ENST00000476173 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
TMEM254-211ENST00000476173 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
TMEM254-211ENST00000476173 DCAF11Q8TEB1 546 aa14.12□□□□□ -0.15
TMEM254-211ENST00000476173 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
TMEM254-211ENST00000476173 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
TMEM254-211ENST00000476173 VGFO15240 615 aaPredicted RBP14.11□□□□□ -0.15
TMEM254-211ENST00000476173 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
TMEM254-211ENST00000476173 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.11□□□□□ -0.15
TMEM254-211ENST00000476173 STAC3Q96MF2 364 aa14.11□□□□□ -0.15
TMEM254-211ENST00000476173 EID1Q9Y6B2 187 aa14.11□□□□□ -0.15
TMEM254-211ENST00000476173 KDM2AQ9Y2K7 1162 aa14.1□□□□□ -0.15
TMEM254-211ENST00000476173 SCAF11Q99590 1463 aaKnown RBP14.1□□□□□ -0.15
TMEM254-211ENST00000476173 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
TMEM254-211ENST00000476173 MYOM2P54296 1465 aa14.08□□□□□ -0.16
TMEM254-211ENST00000476173 PPP1R15AO75807 674 aaPredicted RBP14.08□□□□□ -0.16
TMEM254-211ENST00000476173 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
TMEM254-211ENST00000476173 NRXN1Q9ULB1 1477 aa14.07□□□□□ -0.16
TMEM254-211ENST00000476173 PLEKHG1Q9ULL1 1385 aa14.06□□□□□ -0.16
TMEM254-211ENST00000476173 POLR1AO95602 1720 aaPredicted RBP14.05□□□□□ -0.16
TMEM254-211ENST00000476173 STRCQ7RTU9 1775 aa14.05□□□□□ -0.16
TMEM254-211ENST00000476173 PIK3C2GO75747 1445 aa14.05□□□□□ -0.16
TMEM254-211ENST00000476173 PRAG1Q86YV5 1406 aa14.05□□□□□ -0.16
TMEM254-211ENST00000476173 MED14O60244 1454 aa14.05□□□□□ -0.16
TMEM254-211ENST00000476173 NBPF8Q3BBV2 869 aa14.04□□□□□ -0.16
TMEM254-211ENST00000476173 NPHP4O75161 1426 aaPredicted RBP14.03□□□□□ -0.16
TMEM254-211ENST00000476173 SETBP1Q9Y6X0 1596 aa14.03□□□□□ -0.16
TMEM254-211ENST00000476173 ADAMTS13Q76LX8 1427 aa14.02□□□□□ -0.16
TMEM254-211ENST00000476173 BCANQ96GW7 911 aa14.02□□□□□ -0.17
TMEM254-211ENST00000476173 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
TMEM254-211ENST00000476173 NRXN3Q9Y4C0 1643 aa14.01□□□□□ -0.17
TMEM254-211ENST00000476173 CFAP70Q5T0N1 1121 aa14.01□□□□□ -0.17
TMEM254-211ENST00000476173 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
TMEM254-211ENST00000476173 SLC26A8Q96RN1 970 aa14□□□□□ -0.17
TMEM254-211ENST00000476173 ALKQ9UM73 1620 aa14□□□□□ -0.17
TMEM254-211ENST00000476173 ZEB1P37275 1124 aaPredicted RBP13.99□□□□□ -0.17
TMEM254-211ENST00000476173 TBX22Q9Y458 520 aa13.99□□□□□ -0.17
TMEM254-211ENST00000476173 METP08581 1390 aa13.97□□□□□ -0.17
TMEM254-211ENST00000476173 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
TMEM254-211ENST00000476173 SETD1AO15047 1707 aaKnown RBP13.97□□□□□ -0.17
TMEM254-211ENST00000476173 KIAA1210Q9ULL0 1709 aa13.97□□□□□ -0.17
TMEM254-211ENST00000476173 LAMC1P11047 1609 aa13.96□□□□□ -0.17
TMEM254-211ENST00000476173 TRPM1Q7Z4N2 1603 aa13.96□□□□□ -0.17
TMEM254-211ENST00000476173 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
TMEM254-211ENST00000476173 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
TMEM254-211ENST00000476173 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
TMEM254-211ENST00000476173 ADGRB1O14514 1584 aa13.94□□□□□ -0.18
TMEM254-211ENST00000476173 ASXL1Q8IXJ9 1541 aa13.94□□□□□ -0.18
TMEM254-211ENST00000476173 ROCK2O75116 1388 aaKnown RBP13.93□□□□□ -0.18
TMEM254-211ENST00000476173 GPRASP1Q5JY77 1395 aa13.93□□□□□ -0.18
TMEM254-211ENST00000476173 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
TMEM254-211ENST00000476173 PTPRUQ92729 1446 aa13.92□□□□□ -0.18
TMEM254-211ENST00000476173 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
TMEM254-211ENST00000476173 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
TMEM254-211ENST00000476173 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.18
TMEM254-211ENST00000476173 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
TMEM254-211ENST00000476173 CARD11Q9BXL7 1154 aa13.9□□□□□ -0.18
TMEM254-211ENST00000476173 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
TMEM254-211ENST00000476173 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
TMEM254-211ENST00000476173 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
TMEM254-211ENST00000476173 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
TMEM254-211ENST00000476173 KCNA6P17658 529 aa13.89□□□□□ -0.19
TMEM254-211ENST00000476173 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
TMEM254-211ENST00000476173 STK26Q9P289 416 aa13.89□□□□□ -0.19
TMEM254-211ENST00000476173 ZNF335Q9H4Z2 1342 aaPredicted RBP13.88□□□□□ -0.19
TMEM254-211ENST00000476173 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
TMEM254-211ENST00000476173 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
TMEM254-211ENST00000476173 TECPR2O15040 1411 aa13.87□□□□□ -0.19
TMEM254-211ENST00000476173 NWD1Q149M9 1564 aa13.87□□□□□ -0.19
TMEM254-211ENST00000476173 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
TMEM254-211ENST00000476173 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
TMEM254-211ENST00000476173 ROBO2Q9HCK4 1378 aa13.85□□□□□ -0.19
TMEM254-211ENST00000476173 KNDC1Q76NI1 1749 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms