RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 IQGAP1P46940 1657 aa22.38■■□□□ 1.17
TVP23B-202ENST00000476139 CFAP65Q6ZU64 1925 aaKnown RBP22.37■■□□□ 1.17
TVP23B-202ENST00000476139 ANP32EQ9BTT0 268 aa22.37■■□□□ 1.17
TVP23B-202ENST00000476139 PPP4R2Q9NY27 417 aa22.37■■□□□ 1.17
TVP23B-202ENST00000476139 KNSTRNQ9Y448 316 aa22.36■■□□□ 1.17
TVP23B-202ENST00000476139 ERICH6BQ5W0A0 696 aa22.35■■□□□ 1.17
TVP23B-202ENST00000476139 LMTK2Q8IWU2 1503 aa22.35■■□□□ 1.17
TVP23B-202ENST00000476139 HECW2Q9P2P5 1572 aa22.34■■□□□ 1.17
TVP23B-202ENST00000476139 CDCA8Q53HL2 280 aa22.33■■□□□ 1.17
TVP23B-202ENST00000476139 CFAP74Q9C0B2 1584 aa22.33■■□□□ 1.17
TVP23B-202ENST00000476139 NOS1P29475 1434 aa22.33■■□□□ 1.16
TVP23B-202ENST00000476139 MAP3K4Q9Y6R4 1608 aa22.32■■□□□ 1.16
TVP23B-202ENST00000476139 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
TVP23B-202ENST00000476139 ABCA6Q8N139 1617 aa22.32■■□□□ 1.16
TVP23B-202ENST00000476139 EIF3AQ14152 1382 aaKnown RBP22.31■■□□□ 1.16
TVP23B-202ENST00000476139 KIF1BO60333 1816 aa22.31■■□□□ 1.16
TVP23B-202ENST00000476139 NUTM2DQ5VT03 806 aaPredicted RBP22.31■■□□□ 1.16
TVP23B-202ENST00000476139 MROH2AA6NES4 1674 aa22.31■■□□□ 1.16
TVP23B-202ENST00000476139 MYOM2P54296 1465 aa22.31■■□□□ 1.16
TVP23B-202ENST00000476139 NEURL4Q96JN8 1562 aa22.3■■□□□ 1.16
TVP23B-202ENST00000476139 NEO1Q92859 1461 aa22.3■■□□□ 1.16
TVP23B-202ENST00000476139 TMEM132EQ6IEE7 984 aa22.28■■□□□ 1.16
TVP23B-202ENST00000476139 TRAK1Q9UPV9 953 aa22.28■■□□□ 1.16
TVP23B-202ENST00000476139 PPP2R1AP30153 589 aa22.27■■□□□ 1.16
TVP23B-202ENST00000476139 RNF123Q5XPI4 1314 aa22.27■■□□□ 1.15
TVP23B-202ENST00000476139 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
TVP23B-202ENST00000476139 ADAMTS8Q9UP79 889 aa22.26■■□□□ 1.15
TVP23B-202ENST00000476139 ABCC3O15438 1527 aa22.25■■□□□ 1.15
TVP23B-202ENST00000476139 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
TVP23B-202ENST00000476139 KIAA1210Q9ULL0 1709 aa22.25■■□□□ 1.15
TVP23B-202ENST00000476139 YEATS2Q9ULM3 1422 aa22.25■■□□□ 1.15
TVP23B-202ENST00000476139 ADGRB3O60242 1522 aa22.25■■□□□ 1.15
TVP23B-202ENST00000476139 NRXN1Q9ULB1 1477 aa22.25■■□□□ 1.15
TVP23B-202ENST00000476139 MSH5O43196 834 aa22.23■■□□□ 1.15
TVP23B-202ENST00000476139 C14orf93Q9H972 538 aaKnown RBP22.23■■□□□ 1.15
TVP23B-202ENST00000476139 ERVK-7P63135 1459 aa22.23■■□□□ 1.15
TVP23B-202ENST00000476139 IFT172Q9UG01 1749 aa22.22■■□□□ 1.15
TVP23B-202ENST00000476139 FAM69CQ0P6D2 419 aa22.22■■□□□ 1.15
TVP23B-202ENST00000476139 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
TVP23B-202ENST00000476139 SYNMO15061 1565 aa22.21■■□□□ 1.15
TVP23B-202ENST00000476139 DIP2CQ9Y2E4 1556 aa22.21■■□□□ 1.15
TVP23B-202ENST00000476139 IDI1Q13907 227 aa22.2■■□□□ 1.14
TVP23B-202ENST00000476139 PIK3C2GO75747 1445 aa22.19■■□□□ 1.14
TVP23B-202ENST00000476139 CENPJQ9HC77 1338 aaPredicted RBP22.19■■□□□ 1.14
TVP23B-202ENST00000476139 MYOM1P52179 1685 aa22.18■■□□□ 1.14
TVP23B-202ENST00000476139 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
TVP23B-202ENST00000476139 SIGLEC1Q9BZZ2 1709 aa22.17■■□□□ 1.14
TVP23B-202ENST00000476139 BLMP54132 1417 aaPredicted RBP22.16■■□□□ 1.14
TVP23B-202ENST00000476139 RCAN3Q9UKA8 241 aa22.16■■□□□ 1.14
TVP23B-202ENST00000476139 SLC24A1O60721 1099 aa22.16■■□□□ 1.14
TVP23B-202ENST00000476139 RICTORQ6R327 1708 aa22.15■■□□□ 1.14
TVP23B-202ENST00000476139 RPGRIP1LQ68CZ1 1315 aa22.15■■□□□ 1.14
TVP23B-202ENST00000476139 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
TVP23B-202ENST00000476139 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
TVP23B-202ENST00000476139 KDM5AP29375 1690 aaKnown RBP22.15■■□□□ 1.14
TVP23B-202ENST00000476139 WDR43Q15061 677 aaKnown RBP eCLIP22.14■■□□□ 1.13
TVP23B-202ENST00000476139 SLC12A5Q9H2X9 1139 aa22.14■■□□□ 1.13
TVP23B-202ENST00000476139 PPLO60437 1756 aa22.13■■□□□ 1.13
TVP23B-202ENST00000476139 VGFO15240 615 aaPredicted RBP22.12■■□□□ 1.13
TVP23B-202ENST00000476139 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
TVP23B-202ENST00000476139 FBXO31Q5XUX0 539 aaPredicted RBP22.11■■□□□ 1.13
TVP23B-202ENST00000476139 ADGRB1O14514 1584 aa22.11■■□□□ 1.13
TVP23B-202ENST00000476139 CCDC136Q96JN2 1154 aa22.11■■□□□ 1.13
TVP23B-202ENST00000476139 NPC1L1Q9UHC9 1359 aa22.1■■□□□ 1.13
TVP23B-202ENST00000476139 SBNO2Q9Y2G9 1366 aa22.1■■□□□ 1.13
TVP23B-202ENST00000476139 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
TVP23B-202ENST00000476139 INSRP06213 1382 aa22.1■■□□□ 1.13
TVP23B-202ENST00000476139 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
TVP23B-202ENST00000476139 RIMBP3CA6NJZ7 1639 aa22.08■■□□□ 1.13
TVP23B-202ENST00000476139 RIMBP3BA6NNM3 1639 aa22.08■■□□□ 1.13
TVP23B-202ENST00000476139 RIMBP3Q9UFD9 1639 aa22.08■■□□□ 1.13
TVP23B-202ENST00000476139 ARHGAP31Q2M1Z3 1444 aa22.08■■□□□ 1.12
TVP23B-202ENST00000476139 CCDC146Q8IYE0 955 aa22.08■■□□□ 1.12
TVP23B-202ENST00000476139 SLC52A1Q9NWF4 448 aa22.07■■□□□ 1.12
TVP23B-202ENST00000476139 PLEKHH1Q9ULM0 1364 aa22.06■■□□□ 1.12
TVP23B-202ENST00000476139 PLIN1O60240 522 aa22.06■■□□□ 1.12
TVP23B-202ENST00000476139 EXOC6Q8TAG9 804 aa22.06■■□□□ 1.12
TVP23B-202ENST00000476139 STK26Q9P289 416 aa22.06■■□□□ 1.12
TVP23B-202ENST00000476139 PIK3C2BO00750 1634 aa22.06■■□□□ 1.12
TVP23B-202ENST00000476139 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
TVP23B-202ENST00000476139 GLI2P10070 1586 aa22.05■■□□□ 1.12
TVP23B-202ENST00000476139 TNNT2P45379 298 aaPredicted RBP22.05■■□□□ 1.12
TVP23B-202ENST00000476139 ZMYM4Q5VZL5 1548 aa22.05■■□□□ 1.12
TVP23B-202ENST00000476139 NEXMIFQ5QGS0 1516 aa22.04■■□□□ 1.12
TVP23B-202ENST00000476139 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
TVP23B-202ENST00000476139 TSPOAP1O95153 1857 aa22.02■■□□□ 1.12
TVP23B-202ENST00000476139 NSD3Q9BZ95 1437 aa22.01■■□□□ 1.11
TVP23B-202ENST00000476139 CABP2Q9NPB3 220 aa22.01■■□□□ 1.11
TVP23B-202ENST00000476139 ERICH6Q7L0X2 663 aa22■■□□□ 1.11
TVP23B-202ENST00000476139 QRICH2Q9H0J4 1663 aa22■■□□□ 1.11
TVP23B-202ENST00000476139 DIP2BQ9P265 1576 aa22■■□□□ 1.11
TVP23B-202ENST00000476139 APAF1O14727 1248 aa21.99■■□□□ 1.11
TVP23B-202ENST00000476139 MLECQ14165 292 aa21.99■■□□□ 1.11
TVP23B-202ENST00000476139 MORC1Q86VD1 984 aa21.99■■□□□ 1.11
TVP23B-202ENST00000476139 ZNF521Q96K83 1311 aa21.98■■□□□ 1.11
TVP23B-202ENST00000476139 DUSP27Q5VZP5 1158 aa21.97■■□□□ 1.11
TVP23B-202ENST00000476139 EVC2Q86UK5 1308 aa21.97■■□□□ 1.11
TVP23B-202ENST00000476139 ZC3H13Q5T200 1668 aaKnown RBP21.96■■□□□ 1.11
TVP23B-202ENST00000476139 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
TVP23B-202ENST00000476139 STAG3Q9UJ98 1225 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms