RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 NEXMIFQ5QGS0 1516 aa16.6■□□□□ 0.25
BEST3-204ENST00000476098 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
BEST3-204ENST00000476098 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
BEST3-204ENST00000476098 NRXN1Q9ULB1 1477 aa16.59■□□□□ 0.25
BEST3-204ENST00000476098 SETD1BQ9UPS6 1966 aaKnown RBP16.58■□□□□ 0.24
BEST3-204ENST00000476098 MYO3AQ8NEV4 1616 aa16.58■□□□□ 0.24
BEST3-204ENST00000476098 HDGFP51858 240 aaKnown RBP16.58■□□□□ 0.24
BEST3-204ENST00000476098 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
BEST3-204ENST00000476098 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
BEST3-204ENST00000476098 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
BEST3-204ENST00000476098 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
BEST3-204ENST00000476098 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
BEST3-204ENST00000476098 LTKP29376 864 aa16.56■□□□□ 0.24
BEST3-204ENST00000476098 PIK3C2GO75747 1445 aa16.55■□□□□ 0.24
BEST3-204ENST00000476098 CFAP70Q5T0N1 1121 aa16.55■□□□□ 0.24
BEST3-204ENST00000476098 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
BEST3-204ENST00000476098 MYO5BQ9ULV0 1848 aa16.54■□□□□ 0.24
BEST3-204ENST00000476098 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
BEST3-204ENST00000476098 IFT172Q9UG01 1749 aa16.54■□□□□ 0.24
BEST3-204ENST00000476098 C14orf93Q9H972 538 aaKnown RBP16.54■□□□□ 0.24
BEST3-204ENST00000476098 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
BEST3-204ENST00000476098 PPLO60437 1756 aa16.53■□□□□ 0.24
BEST3-204ENST00000476098 SLIT1O75093 1534 aa16.53■□□□□ 0.24
BEST3-204ENST00000476098 EID1Q9Y6B2 187 aa16.53■□□□□ 0.24
BEST3-204ENST00000476098 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.24
BEST3-204ENST00000476098 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.23
BEST3-204ENST00000476098 CARD11Q9BXL7 1154 aa16.51■□□□□ 0.23
BEST3-204ENST00000476098 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
BEST3-204ENST00000476098 ZNF142P52746 1687 aaPredicted RBP16.5■□□□□ 0.23
BEST3-204ENST00000476098 ANKLE2Q86XL3 938 aa16.5■□□□□ 0.23
BEST3-204ENST00000476098 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
BEST3-204ENST00000476098 TRPM1Q7Z4N2 1603 aa16.47■□□□□ 0.23
BEST3-204ENST00000476098 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
BEST3-204ENST00000476098 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.23
BEST3-204ENST00000476098 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
BEST3-204ENST00000476098 BCANQ96GW7 911 aa16.46■□□□□ 0.23
BEST3-204ENST00000476098 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
BEST3-204ENST00000476098 HSPA2P54652 639 aa16.44■□□□□ 0.22
BEST3-204ENST00000476098 USP47Q96K76 1375 aa16.44■□□□□ 0.22
BEST3-204ENST00000476098 LMTK3Q96Q04 1460 aa16.44■□□□□ 0.22
BEST3-204ENST00000476098 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
BEST3-204ENST00000476098 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
BEST3-204ENST00000476098 ALKQ9UM73 1620 aa16.43■□□□□ 0.22
BEST3-204ENST00000476098 KIAA1210Q9ULL0 1709 aa16.43■□□□□ 0.22
BEST3-204ENST00000476098 ADGRB1O14514 1584 aa16.43■□□□□ 0.22
BEST3-204ENST00000476098 SETBP1Q9Y6X0 1596 aa16.43■□□□□ 0.22
BEST3-204ENST00000476098 NCKAP5LQ9HCH0 1330 aa16.42■□□□□ 0.22
BEST3-204ENST00000476098 SLC26A8Q96RN1 970 aa16.42■□□□□ 0.22
BEST3-204ENST00000476098 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
BEST3-204ENST00000476098 TBX22Q9Y458 520 aa16.41■□□□□ 0.22
BEST3-204ENST00000476098 METP08581 1390 aa16.41■□□□□ 0.22
BEST3-204ENST00000476098 MED14O60244 1454 aa16.41■□□□□ 0.22
BEST3-204ENST00000476098 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
BEST3-204ENST00000476098 ST20-MTHFSA0A0A6YYL1 179 aa16.4■□□□□ 0.22
BEST3-204ENST00000476098 TRAK1Q9UPV9 953 aa16.39■□□□□ 0.21
BEST3-204ENST00000476098 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
BEST3-204ENST00000476098 LAMC1P11047 1609 aa16.38■□□□□ 0.21
BEST3-204ENST00000476098 STK26Q9P289 416 aa16.38■□□□□ 0.21
BEST3-204ENST00000476098 NPHP4O75161 1426 aaPredicted RBP16.37■□□□□ 0.21
BEST3-204ENST00000476098 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
BEST3-204ENST00000476098 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
BEST3-204ENST00000476098 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
BEST3-204ENST00000476098 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
BEST3-204ENST00000476098 TESK2Q96S53 571 aa16.34■□□□□ 0.21
BEST3-204ENST00000476098 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
BEST3-204ENST00000476098 SETD1AO15047 1707 aaKnown RBP16.34■□□□□ 0.21
BEST3-204ENST00000476098 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
BEST3-204ENST00000476098 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
BEST3-204ENST00000476098 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
BEST3-204ENST00000476098 PIK3R4Q99570 1358 aa16.32■□□□□ 0.2
BEST3-204ENST00000476098 SIRT1Q96EB6 747 aa16.31■□□□□ 0.2
BEST3-204ENST00000476098 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
BEST3-204ENST00000476098 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
BEST3-204ENST00000476098 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
BEST3-204ENST00000476098 TECPR2O15040 1411 aa16.3■□□□□ 0.2
BEST3-204ENST00000476098 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
BEST3-204ENST00000476098 POGKQ9P215 609 aa16.28■□□□□ 0.2
BEST3-204ENST00000476098 POLR1AO95602 1720 aaPredicted RBP16.28■□□□□ 0.2
BEST3-204ENST00000476098 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
BEST3-204ENST00000476098 DLC1Q96QB1 1528 aa16.27■□□□□ 0.2
BEST3-204ENST00000476098 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.19
BEST3-204ENST00000476098 KCNA6P17658 529 aa16.27■□□□□ 0.19
BEST3-204ENST00000476098 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.19
BEST3-204ENST00000476098 FAM135BQ49AJ0 1406 aa16.26■□□□□ 0.19
BEST3-204ENST00000476098 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
BEST3-204ENST00000476098 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
BEST3-204ENST00000476098 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
BEST3-204ENST00000476098 TMF1P82094 1093 aa16.25■□□□□ 0.19
BEST3-204ENST00000476098 KIF7Q2M1P5 1343 aa16.25■□□□□ 0.19
BEST3-204ENST00000476098 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
BEST3-204ENST00000476098 STRCQ7RTU9 1775 aa16.24■□□□□ 0.19
BEST3-204ENST00000476098 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
BEST3-204ENST00000476098 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
BEST3-204ENST00000476098 PTCH1Q13635 1447 aa16.23■□□□□ 0.19
BEST3-204ENST00000476098 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
BEST3-204ENST00000476098 ARHGEF28Q8N1W1 1705 aaKnown RBP16.23■□□□□ 0.19
BEST3-204ENST00000476098 CPS1P31327 1500 aa16.22■□□□□ 0.19
BEST3-204ENST00000476098 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
BEST3-204ENST00000476098 CDCA8Q53HL2 280 aa16.2■□□□□ 0.18
BEST3-204ENST00000476098 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms