RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 NEXMIFQ5QGS0 1516 aa11.6□□□□□ -0.55
GABRE-207ENST00000476016 RGL3Q3MIN7 710 aa11.6□□□□□ -0.55
GABRE-207ENST00000476016 POLR1AO95602 1720 aaPredicted RBP11.58□□□□□ -0.56
GABRE-207ENST00000476016 MLECQ14165 292 aa11.58□□□□□ -0.56
GABRE-207ENST00000476016 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
GABRE-207ENST00000476016 A2ML1A8K2U0 1454 aa11.57□□□□□ -0.56
GABRE-207ENST00000476016 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
GABRE-207ENST00000476016 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
GABRE-207ENST00000476016 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
GABRE-207ENST00000476016 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
GABRE-207ENST00000476016 EIF4G2P78344 907 aaKnown RBP eCLIP11.56□□□□□ -0.56
GABRE-207ENST00000476016 UBR1Q8IWV7 1749 aa11.56□□□□□ -0.56
GABRE-207ENST00000476016 C14orf93Q9H972 538 aaKnown RBP11.55□□□□□ -0.56
GABRE-207ENST00000476016 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
GABRE-207ENST00000476016 ADGRF5Q8IZF2 1346 aa11.55□□□□□ -0.56
GABRE-207ENST00000476016 TNRQ92752 1358 aa11.54□□□□□ -0.56
GABRE-207ENST00000476016 VGFO15240 615 aaPredicted RBP11.54□□□□□ -0.56
GABRE-207ENST00000476016 HSPA5P11021 654 aaKnown RBP11.54□□□□□ -0.56
GABRE-207ENST00000476016 NBPF1Q3BBV0 1214 aa11.54□□□□□ -0.56
GABRE-207ENST00000476016 ESF1Q9H501 851 aaKnown RBP11.54□□□□□ -0.56
GABRE-207ENST00000476016 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
GABRE-207ENST00000476016 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
GABRE-207ENST00000476016 RIMS1Q86UR5 1692 aaKnown RBP11.52□□□□□ -0.57
GABRE-207ENST00000476016 USP47Q96K76 1375 aa11.52□□□□□ -0.57
GABRE-207ENST00000476016 ARHGAP23Q9P227 1491 aa11.51□□□□□ -0.57
GABRE-207ENST00000476016 SETD1AO15047 1707 aaKnown RBP11.51□□□□□ -0.57
GABRE-207ENST00000476016 ROCK2O75116 1388 aaKnown RBP11.51□□□□□ -0.57
GABRE-207ENST00000476016 SLIT1O75093 1534 aa11.5□□□□□ -0.57
GABRE-207ENST00000476016 C11orf95C9JLR9 678 aaPredicted RBP11.5□□□□□ -0.57
GABRE-207ENST00000476016 CEBPAP49715 358 aaPredicted RBP11.5□□□□□ -0.57
GABRE-207ENST00000476016 CARD11Q9BXL7 1154 aa11.5□□□□□ -0.57
GABRE-207ENST00000476016 TESK2Q96S53 571 aa11.49□□□□□ -0.57
GABRE-207ENST00000476016 TMEM2Q9UHN6 1383 aa11.49□□□□□ -0.57
GABRE-207ENST00000476016 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
GABRE-207ENST00000476016 MYO3AQ8NEV4 1616 aa11.49□□□□□ -0.57
GABRE-207ENST00000476016 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
GABRE-207ENST00000476016 ZNF142P52746 1687 aaPredicted RBP11.49□□□□□ -0.57
GABRE-207ENST00000476016 ZNF326Q5BKZ1 582 aaKnown RBP11.48□□□□□ -0.57
GABRE-207ENST00000476016 CFAP70Q5T0N1 1121 aa11.48□□□□□ -0.57
GABRE-207ENST00000476016 WASHC2AQ641Q2 1341 aa11.48□□□□□ -0.57
GABRE-207ENST00000476016 MED14O60244 1454 aa11.47□□□□□ -0.57
GABRE-207ENST00000476016 RIMS2Q9UQ26 1411 aa11.47□□□□□ -0.57
GABRE-207ENST00000476016 SBNO2Q9Y2G9 1366 aa11.47□□□□□ -0.57
GABRE-207ENST00000476016 DIEXFQ68CQ4 756 aaKnown RBP11.47□□□□□ -0.57
GABRE-207ENST00000476016 ALKQ9UM73 1620 aa11.46□□□□□ -0.57
GABRE-207ENST00000476016 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
GABRE-207ENST00000476016 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.46□□□□□ -0.57
GABRE-207ENST00000476016 HIRIP3Q9BW71 556 aaPredicted RBP11.46□□□□□ -0.57
GABRE-207ENST00000476016 ASXL1Q8IXJ9 1541 aa11.45□□□□□ -0.58
GABRE-207ENST00000476016 PTPRMP28827 1452 aa11.45□□□□□ -0.58
GABRE-207ENST00000476016 CCDC7Q96M83 1385 aa11.45□□□□□ -0.58
GABRE-207ENST00000476016 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
GABRE-207ENST00000476016 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
GABRE-207ENST00000476016 SLC24A1O60721 1099 aa11.44□□□□□ -0.58
GABRE-207ENST00000476016 CEP170BQ9Y4F5 1589 aaPredicted RBP11.44□□□□□ -0.58
GABRE-207ENST00000476016 KIF7Q2M1P5 1343 aa11.43□□□□□ -0.58
GABRE-207ENST00000476016 THEMISQ8N1K5 641 aaPredicted RBP11.43□□□□□ -0.58
GABRE-207ENST00000476016 ARHGEF28Q8N1W1 1705 aaKnown RBP11.43□□□□□ -0.58
GABRE-207ENST00000476016 LTKP29376 864 aa11.42□□□□□ -0.58
GABRE-207ENST00000476016 SIRT1Q96EB6 747 aa11.42□□□□□ -0.58
GABRE-207ENST00000476016 ADAMTS13Q76LX8 1427 aa11.42□□□□□ -0.58
GABRE-207ENST00000476016 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
GABRE-207ENST00000476016 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
GABRE-207ENST00000476016 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
GABRE-207ENST00000476016 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
GABRE-207ENST00000476016 ABCC11Q96J66 1382 aa11.41□□□□□ -0.58
GABRE-207ENST00000476016 TECPR2O15040 1411 aa11.4□□□□□ -0.58
GABRE-207ENST00000476016 EIF3AQ14152 1382 aaKnown RBP11.4□□□□□ -0.59
GABRE-207ENST00000476016 KNDC1Q76NI1 1749 aa11.39□□□□□ -0.59
GABRE-207ENST00000476016 YTHDC2Q9H6S0 1430 aaKnown RBP11.38□□□□□ -0.59
GABRE-207ENST00000476016 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
GABRE-207ENST00000476016 DDX10Q13206 875 aaKnown RBP11.38□□□□□ -0.59
GABRE-207ENST00000476016 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
GABRE-207ENST00000476016 NUTM2DQ5VT03 806 aaPredicted RBP11.38□□□□□ -0.59
GABRE-207ENST00000476016 TMEM132EQ6IEE7 984 aa11.38□□□□□ -0.59
GABRE-207ENST00000476016 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
GABRE-207ENST00000476016 LRPPRCP42704 1394 aaKnown RBP11.38□□□□□ -0.59
GABRE-207ENST00000476016 TXNDC2Q86VQ3 553 aa11.37□□□□□ -0.59
GABRE-207ENST00000476016 DISP3Q9P2K9 1392 aa11.37□□□□□ -0.59
GABRE-207ENST00000476016 DIP2AQ14689 1571 aa11.37□□□□□ -0.59
GABRE-207ENST00000476016 QRICH2Q9H0J4 1663 aa11.36□□□□□ -0.59
GABRE-207ENST00000476016 PPP4R3CPQ6ZMV5 832 aa11.36□□□□□ -0.59
GABRE-207ENST00000476016 METP08581 1390 aa11.36□□□□□ -0.59
GABRE-207ENST00000476016 FAM135BQ49AJ0 1406 aa11.35□□□□□ -0.59
GABRE-207ENST00000476016 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
GABRE-207ENST00000476016 TMF1P82094 1093 aa11.35□□□□□ -0.59
GABRE-207ENST00000476016 EID1Q9Y6B2 187 aa11.35□□□□□ -0.59
GABRE-207ENST00000476016 CENPJQ9HC77 1338 aaPredicted RBP11.35□□□□□ -0.59
GABRE-207ENST00000476016 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
GABRE-207ENST00000476016 MIER1Q8N108 512 aa11.34□□□□□ -0.59
GABRE-207ENST00000476016 CPS1P31327 1500 aa11.34□□□□□ -0.59
GABRE-207ENST00000476016 MYOM1P52179 1685 aa11.33□□□□□ -0.6
GABRE-207ENST00000476016 CHD2O14647 1828 aaKnown RBP11.33□□□□□ -0.6
GABRE-207ENST00000476016 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
GABRE-207ENST00000476016 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
GABRE-207ENST00000476016 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
GABRE-207ENST00000476016 XRN1Q8IZH2 1706 aaKnown RBP11.32□□□□□ -0.6
GABRE-207ENST00000476016 ANKLE2Q86XL3 938 aa11.31□□□□□ -0.6
GABRE-207ENST00000476016 PTPRUQ92729 1446 aa11.31□□□□□ -0.6
GABRE-207ENST00000476016 TULP4Q9NRJ4 1543 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms