RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
CSNK2B-207ENST00000475875 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
CSNK2B-207ENST00000475875 KIF15Q9NS87 1388 aa23.17■■□□□ 1.3
CSNK2B-207ENST00000475875 CADPS2Q86UW7 1296 aa23.17■■□□□ 1.3
CSNK2B-207ENST00000475875 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
CSNK2B-207ENST00000475875 SLC52A1Q9NWF4 448 aa23.15■■□□□ 1.3
CSNK2B-207ENST00000475875 NOS1P29475 1434 aa23.15■■□□□ 1.3
CSNK2B-207ENST00000475875 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.3
CSNK2B-207ENST00000475875 BCANQ96GW7 911 aa23.14■■□□□ 1.29
CSNK2B-207ENST00000475875 CHD2O14647 1828 aaKnown RBP23.14■■□□□ 1.29
CSNK2B-207ENST00000475875 FOXD1Q16676 465 aa23.12■■□□□ 1.29
CSNK2B-207ENST00000475875 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
CSNK2B-207ENST00000475875 AFF2P51816 1311 aa23.11■■□□□ 1.29
CSNK2B-207ENST00000475875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.11■■□□□ 1.29
CSNK2B-207ENST00000475875 ATF3P18847 181 aa23.1■■□□□ 1.29
CSNK2B-207ENST00000475875 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
CSNK2B-207ENST00000475875 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
CSNK2B-207ENST00000475875 DIP2AQ14689 1571 aa23.1■■□□□ 1.29
CSNK2B-207ENST00000475875 RGS12O14924 1447 aa23.09■■□□□ 1.29
CSNK2B-207ENST00000475875 ZFYVE9O95405 1425 aa23.09■■□□□ 1.29
CSNK2B-207ENST00000475875 RBM6P78332 1123 aaKnown RBP23.09■■□□□ 1.29
CSNK2B-207ENST00000475875 C14orf37Q86TY3 774 aa23.08■■□□□ 1.29
CSNK2B-207ENST00000475875 SETD5Q9C0A6 1442 aa23.06■■□□□ 1.28
CSNK2B-207ENST00000475875 PIK3R4Q99570 1358 aa23.05■■□□□ 1.28
CSNK2B-207ENST00000475875 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
CSNK2B-207ENST00000475875 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
CSNK2B-207ENST00000475875 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
CSNK2B-207ENST00000475875 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
CSNK2B-207ENST00000475875 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.05■■□□□ 1.28
CSNK2B-207ENST00000475875 BRINP3Q76B58 766 aa23.04■■□□□ 1.28
CSNK2B-207ENST00000475875 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
CSNK2B-207ENST00000475875 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
CSNK2B-207ENST00000475875 DCCP43146 1447 aa23.02■■□□□ 1.28
CSNK2B-207ENST00000475875 RIMS2Q9UQ26 1411 aa23.02■■□□□ 1.28
CSNK2B-207ENST00000475875 QTRT2Q9H974 415 aaKnown RBP23.02■■□□□ 1.28
CSNK2B-207ENST00000475875 ABCC5O15440 1437 aa23.01■■□□□ 1.27
CSNK2B-207ENST00000475875 NUTM2DQ5VT03 806 aaPredicted RBP23.01■■□□□ 1.27
CSNK2B-207ENST00000475875 ZRANB1Q9UGI0 708 aa23.01■■□□□ 1.27
CSNK2B-207ENST00000475875 RPRD2Q5VT52 1461 aaKnown RBP23■■□□□ 1.27
CSNK2B-207ENST00000475875 NGLY1Q96IV0 654 aa23■■□□□ 1.27
CSNK2B-207ENST00000475875 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.99■■□□□ 1.27
CSNK2B-207ENST00000475875 CROCC2H7BZ55 1655 aa22.99■■□□□ 1.27
CSNK2B-207ENST00000475875 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
CSNK2B-207ENST00000475875 ADAMTS13Q76LX8 1427 aa22.97■■□□□ 1.27
CSNK2B-207ENST00000475875 ASXL1Q8IXJ9 1541 aa22.97■■□□□ 1.27
CSNK2B-207ENST00000475875 C8orf37Q96NL8 207 aa22.96■■□□□ 1.27
CSNK2B-207ENST00000475875 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
CSNK2B-207ENST00000475875 TMEM131LA2VDJ0 1609 aa22.93■■□□□ 1.26
CSNK2B-207ENST00000475875 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
CSNK2B-207ENST00000475875 DAPK1P53355 1430 aa22.92■■□□□ 1.26
CSNK2B-207ENST00000475875 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
CSNK2B-207ENST00000475875 CCDC125Q86Z20 511 aa22.9■■□□□ 1.26
CSNK2B-207ENST00000475875 TRPM2O94759 1503 aa22.89■■□□□ 1.26
CSNK2B-207ENST00000475875 MST1RQ04912 1400 aa22.89■■□□□ 1.25
CSNK2B-207ENST00000475875 GCC2Q8IWJ2 1684 aa22.88■■□□□ 1.25
CSNK2B-207ENST00000475875 KANK4Q5T7N3 995 aaPredicted RBP22.88■■□□□ 1.25
CSNK2B-207ENST00000475875 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
CSNK2B-207ENST00000475875 VPS8Q8N3P4 1428 aa22.88■■□□□ 1.25
CSNK2B-207ENST00000475875 EP400Q96L91 3159 aa22.88■■□□□ 1.25
CSNK2B-207ENST00000475875 SETBP1Q9Y6X0 1596 aa22.88■■□□□ 1.25
CSNK2B-207ENST00000475875 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
CSNK2B-207ENST00000475875 PTPN23Q9H3S7 1636 aa22.86■■□□□ 1.25
CSNK2B-207ENST00000475875 TRPC5Q9UL62 973 aaPredicted RBP22.85■■□□□ 1.25
CSNK2B-207ENST00000475875 PTPRUQ92729 1446 aa22.83■■□□□ 1.25
CSNK2B-207ENST00000475875 USP21Q9UK80 565 aa22.81■■□□□ 1.24
CSNK2B-207ENST00000475875 FNBP4Q8N3X1 1017 aaPredicted RBP22.8■■□□□ 1.24
CSNK2B-207ENST00000475875 ADAMTS2O95450 1211 aa22.79■■□□□ 1.24
CSNK2B-207ENST00000475875 PTCH1Q13635 1447 aa22.79■■□□□ 1.24
CSNK2B-207ENST00000475875 ADGRL2O95490 1459 aa22.79■■□□□ 1.24
CSNK2B-207ENST00000475875 ATRNO75882 1429 aa22.78■■□□□ 1.24
CSNK2B-207ENST00000475875 CHGAP10645 457 aaKnown RBP22.78■■□□□ 1.24
CSNK2B-207ENST00000475875 XRN1Q8IZH2 1706 aaKnown RBP22.78■■□□□ 1.24
CSNK2B-207ENST00000475875 CHIC2Q9UKJ5 165 aa22.78■■□□□ 1.24
CSNK2B-207ENST00000475875 UNC13BO14795 1591 aa22.76■■□□□ 1.23
CSNK2B-207ENST00000475875 ADGRL3Q9HAR2 1447 aa22.75■■□□□ 1.23
CSNK2B-207ENST00000475875 DDX17Q92841 729 aaKnown RBP22.74■■□□□ 1.23
CSNK2B-207ENST00000475875 LAMC1P11047 1609 aa22.74■■□□□ 1.23
CSNK2B-207ENST00000475875 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
CSNK2B-207ENST00000475875 SOS2Q07890 1332 aaPredicted RBP22.72■■□□□ 1.23
CSNK2B-207ENST00000475875 LRP5O75197 1615 aa22.68■■□□□ 1.22
CSNK2B-207ENST00000475875 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
CSNK2B-207ENST00000475875 BLMP54132 1417 aaPredicted RBP22.67■■□□□ 1.22
CSNK2B-207ENST00000475875 NRXN3Q9Y4C0 1643 aa22.67■■□□□ 1.22
CSNK2B-207ENST00000475875 COL22A1Q8NFW1 1626 aaPredicted RBP22.64■■□□□ 1.22
CSNK2B-207ENST00000475875 METP08581 1390 aa22.63■■□□□ 1.21
CSNK2B-207ENST00000475875 BCL9LQ86UU0 1499 aa22.63■■□□□ 1.21
CSNK2B-207ENST00000475875 E9PCH4 1651 aa22.62■■□□□ 1.21
CSNK2B-207ENST00000475875 MYOM2P54296 1465 aa22.62■■□□□ 1.21
CSNK2B-207ENST00000475875 GJD4Q96KN9 370 aaPredicted RBP22.62■■□□□ 1.21
CSNK2B-207ENST00000475875 NALCNQ8IZF0 1738 aa22.62■■□□□ 1.21
CSNK2B-207ENST00000475875 IQGAP3Q86VI3 1631 aa22.61■■□□□ 1.21
CSNK2B-207ENST00000475875 APLP2Q06481 763 aa22.56■■□□□ 1.2
CSNK2B-207ENST00000475875 SF3B2Q13435 895 aaKnown RBP22.56■■□□□ 1.2
CSNK2B-207ENST00000475875 ORAI2Q96SN7 254 aa22.56■■□□□ 1.2
CSNK2B-207ENST00000475875 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
CSNK2B-207ENST00000475875 DEFB132Q7Z7B7 95 aa22.53■■□□□ 1.2
CSNK2B-207ENST00000475875 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.53■■□□□ 1.2
CSNK2B-207ENST00000475875 NPHP3Q7Z494 1330 aa22.53■■□□□ 1.2
CSNK2B-207ENST00000475875 PRAG1Q86YV5 1406 aa22.51■■□□□ 1.19
CSNK2B-207ENST00000475875 RALGAPBQ86X10 1494 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms