RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 COL16A1Q07092 1604 aaPredicted RBP32.02■■■□□ 2.72
HDAC11-217ENST00000475818 LMTK2Q8IWU2 1503 aa32.01■■■□□ 2.72
HDAC11-217ENST00000475818 NOS1P29475 1434 aa32■■■□□ 2.71
HDAC11-217ENST00000475818 ZNF772Q68DY9 489 aaPredicted RBP31.99■■■□□ 2.71
HDAC11-217ENST00000475818 SPATA31A6Q5VVP1 1343 aa31.98■■■□□ 2.71
HDAC11-217ENST00000475818 DAPK1P53355 1430 aa31.96■■■□□ 2.71
HDAC11-217ENST00000475818 CHIC2Q9UKJ5 165 aa31.96■■■□□ 2.71
HDAC11-217ENST00000475818 C14orf37Q86TY3 774 aa31.95■■■□□ 2.71
HDAC11-217ENST00000475818 FGD6Q6ZV73 1430 aa31.93■■■□□ 2.7
HDAC11-217ENST00000475818 PPP1R15AO75807 674 aaPredicted RBP31.93■■■□□ 2.7
HDAC11-217ENST00000475818 SLC52A1Q9NWF4 448 aa31.93■■■□□ 2.7
HDAC11-217ENST00000475818 PTPN23Q9H3S7 1636 aa31.93■■■□□ 2.7
HDAC11-217ENST00000475818 PLEKHG1Q9ULL1 1385 aa31.93■■■□□ 2.7
HDAC11-217ENST00000475818 ZFYVE9O95405 1425 aa31.91■■■□□ 2.7
HDAC11-217ENST00000475818 ANKRD30AQ9BXX3 1397 aa31.89■■■□□ 2.7
HDAC11-217ENST00000475818 CHD2O14647 1828 aaKnown RBP31.89■■■□□ 2.69
HDAC11-217ENST00000475818 RXRBP28702 533 aa31.88■■■□□ 2.69
HDAC11-217ENST00000475818 RIMS2Q9UQ26 1411 aa31.88■■■□□ 2.69
HDAC11-217ENST00000475818 NUTM2BA6NNL0 878 aaPredicted RBP31.85■■■□□ 2.69
HDAC11-217ENST00000475818 NUTM2EB1AL46 878 aaPredicted RBP31.85■■■□□ 2.69
HDAC11-217ENST00000475818 NUTM2AQ8IVF1 878 aaPredicted RBP31.85■■■□□ 2.69
HDAC11-217ENST00000475818 AHDC1Q5TGY3 1603 aaPredicted RBP31.84■■■□□ 2.69
HDAC11-217ENST00000475818 NCOA3Q9Y6Q9 1424 aa31.83■■■□□ 2.69
HDAC11-217ENST00000475818 ATF3P18847 181 aa31.82■■■□□ 2.68
HDAC11-217ENST00000475818 CADPS2Q86UW7 1296 aa31.82■■■□□ 2.68
HDAC11-217ENST00000475818 TBX22Q9Y458 520 aa31.82■■■□□ 2.68
HDAC11-217ENST00000475818 SHPRHQ149N8 1683 aa31.82■■■□□ 2.68
HDAC11-217ENST00000475818 HDGFP51858 240 aaKnown RBP31.81■■■□□ 2.68
HDAC11-217ENST00000475818 NUTM2DQ5VT03 806 aaPredicted RBP31.8■■■□□ 2.68
HDAC11-217ENST00000475818 C19orf44Q9H6X5 657 aa31.79■■■□□ 2.68
HDAC11-217ENST00000475818 MYO5BQ9ULV0 1848 aa31.79■■■□□ 2.68
HDAC11-217ENST00000475818 CHGAP10645 457 aaKnown RBP31.78■■■□□ 2.68
HDAC11-217ENST00000475818 GCC2Q8IWJ2 1684 aa31.78■■■□□ 2.68
HDAC11-217ENST00000475818 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.78■■■□□ 2.68
HDAC11-217ENST00000475818 LOC105371045A0A1W2PR82 267 aa31.76■■■□□ 2.67
HDAC11-217ENST00000475818 RPRD2Q5VT52 1461 aaKnown RBP31.76■■■□□ 2.67
HDAC11-217ENST00000475818 BRINP3Q76B58 766 aa31.75■■■□□ 2.67
HDAC11-217ENST00000475818 TMEM131LA2VDJ0 1609 aa31.75■■■□□ 2.67
HDAC11-217ENST00000475818 ADAMTS13Q76LX8 1427 aa31.75■■■□□ 2.67
HDAC11-217ENST00000475818 AFF2P51816 1311 aa31.75■■■□□ 2.67
HDAC11-217ENST00000475818 CDK12Q9NYV4 1490 aaPredicted RBP31.74■■■□□ 2.67
HDAC11-217ENST00000475818 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.73■■■□□ 2.67
HDAC11-217ENST00000475818 DIP2AQ14689 1571 aa31.73■■■□□ 2.67
HDAC11-217ENST00000475818 APLP2Q06481 763 aa31.67■■■□□ 2.66
HDAC11-217ENST00000475818 AMOTL2Q9Y2J4 779 aa31.66■■■□□ 2.66
HDAC11-217ENST00000475818 PIK3R4Q99570 1358 aa31.66■■■□□ 2.66
HDAC11-217ENST00000475818 ADGRL2O95490 1459 aa31.65■■■□□ 2.66
HDAC11-217ENST00000475818 RGS12O14924 1447 aa31.65■■■□□ 2.66
HDAC11-217ENST00000475818 ANKRD50Q9ULJ7 1429 aa31.65■■■□□ 2.66
HDAC11-217ENST00000475818 C8orf37Q96NL8 207 aa31.63■■■□□ 2.65
HDAC11-217ENST00000475818 PTPRUQ92729 1446 aa31.63■■■□□ 2.65
HDAC11-217ENST00000475818 ASXL1Q8IXJ9 1541 aa31.63■■■□□ 2.65
HDAC11-217ENST00000475818 SETD5Q9C0A6 1442 aa31.6■■■□□ 2.65
HDAC11-217ENST00000475818 QTRT2Q9H974 415 aaKnown RBP31.6■■■□□ 2.65
HDAC11-217ENST00000475818 TRPM2O94759 1503 aa31.59■■■□□ 2.65
HDAC11-217ENST00000475818 RBM6P78332 1123 aaKnown RBP31.58■■■□□ 2.65
HDAC11-217ENST00000475818 FAM50AQ14320 339 aaKnown RBP31.57■■■□□ 2.64
HDAC11-217ENST00000475818 DDX17Q92841 729 aaKnown RBP31.56■■■□□ 2.64
HDAC11-217ENST00000475818 DCCP43146 1447 aa31.56■■■□□ 2.64
HDAC11-217ENST00000475818 LRRC59Q96AG4 307 aaKnown RBP31.55■■■□□ 2.64
HDAC11-217ENST00000475818 MST1RQ04912 1400 aa31.55■■■□□ 2.64
HDAC11-217ENST00000475818 PNPLA6Q8IY17 1366 aa31.52■■■□□ 2.64
HDAC11-217ENST00000475818 NHSL1Q5SYE7 1610 aa31.51■■■□□ 2.63
HDAC11-217ENST00000475818 UNC13BO14795 1591 aa31.51■■■□□ 2.63
HDAC11-217ENST00000475818 E9PCH4 1651 aa31.49■■■□□ 2.63
HDAC11-217ENST00000475818 ADAMTS2O95450 1211 aa31.48■■■□□ 2.63
HDAC11-217ENST00000475818 NGLY1Q96IV0 654 aa31.47■■■□□ 2.63
HDAC11-217ENST00000475818 XRN1Q8IZH2 1706 aaKnown RBP31.46■■■□□ 2.63
HDAC11-217ENST00000475818 SRCAPQ6ZRS2 3230 aa31.44■■■□□ 2.62
HDAC11-217ENST00000475818 ATAD2Q6PL18 1390 aa31.43■■■□□ 2.62
HDAC11-217ENST00000475818 NRXN3Q9Y4C0 1643 aa31.41■■■□□ 2.62
HDAC11-217ENST00000475818 METP08581 1390 aa31.4■■■□□ 2.62
HDAC11-217ENST00000475818 ADGRL3Q9HAR2 1447 aa31.39■■■□□ 2.62
HDAC11-217ENST00000475818 SETBP1Q9Y6X0 1596 aa31.37■■■□□ 2.61
HDAC11-217ENST00000475818 ZRANB1Q9UGI0 708 aa31.36■■■□□ 2.61
HDAC11-217ENST00000475818 USP21Q9UK80 565 aa31.36■■■□□ 2.61
HDAC11-217ENST00000475818 IQGAP3Q86VI3 1631 aa31.35■■■□□ 2.61
HDAC11-217ENST00000475818 ZNF326Q5BKZ1 582 aaKnown RBP31.34■■■□□ 2.61
HDAC11-217ENST00000475818 NUP155O75694 1391 aa31.32■■■□□ 2.6
HDAC11-217ENST00000475818 TRPC5Q9UL62 973 aaPredicted RBP31.31■■■□□ 2.6
HDAC11-217ENST00000475818 NALCNQ8IZF0 1738 aa31.31■■■□□ 2.6
HDAC11-217ENST00000475818 C1orf167Q5SNV9 1468 aa31.3■■■□□ 2.6
HDAC11-217ENST00000475818 FOXD1Q16676 465 aa31.29■■■□□ 2.6
HDAC11-217ENST00000475818 ORAI2Q96SN7 254 aa31.26■■■□□ 2.59
HDAC11-217ENST00000475818 ATRNO75882 1429 aa31.24■■■□□ 2.59
HDAC11-217ENST00000475818 SOS2Q07890 1332 aaPredicted RBP31.24■■■□□ 2.59
HDAC11-217ENST00000475818 FNBP4Q8N3X1 1017 aaPredicted RBP31.23■■■□□ 2.59
HDAC11-217ENST00000475818 PTCH1Q13635 1447 aa31.23■■■□□ 2.59
HDAC11-217ENST00000475818 ROCK1Q13464 1354 aa31.21■■■□□ 2.59
HDAC11-217ENST00000475818 LAMC1P11047 1609 aa31.19■■■□□ 2.58
HDAC11-217ENST00000475818 SPHKAPQ2M3C7 1700 aa31.15■■■□□ 2.58
HDAC11-217ENST00000475818 NEXMIFQ5QGS0 1516 aa31.14■■■□□ 2.58
HDAC11-217ENST00000475818 ITGAEP38570 1179 aa31.14■■■□□ 2.58
HDAC11-217ENST00000475818 CCDC125Q86Z20 511 aa31.14■■■□□ 2.58
HDAC11-217ENST00000475818 ROBO2Q9HCK4 1378 aa31.14■■■□□ 2.58
HDAC11-217ENST00000475818 BCL9LQ86UU0 1499 aa31.1■■■□□ 2.57
HDAC11-217ENST00000475818 COL22A1Q8NFW1 1626 aaPredicted RBP31.09■■■□□ 2.57
HDAC11-217ENST00000475818 MYOM2P54296 1465 aa31.09■■■□□ 2.57
HDAC11-217ENST00000475818 CLTCL1P53675 1640 aa31.07■■■□□ 2.56
HDAC11-217ENST00000475818 GJD4Q96KN9 370 aaPredicted RBP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms