RNA–Protein interactions for RNA: ENST00000475553.1

USP37-208, Transcript of ubiquitin specific peptidase 37, human

TSL 4

Gene USP37, Length 613 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP37-208	ENST00000475553	RSPH4A	Q5TD94	716 aa		11.49	□□□□□ -0.57
USP37-208	ENST00000475553	BEGAIN	Q9BUH8	593 aa		11.49	□□□□□ -0.57
USP37-208	ENST00000475553	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.49	□□□□□ -0.57
USP37-208	ENST00000475553	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.49	□□□□□ -0.57
USP37-208	ENST00000475553	C3orf80	F5H4A9	247 aa		11.48	□□□□□ -0.57
USP37-208	ENST00000475553	TMEM134	Q9H6X4	195 aa		11.48	□□□□□ -0.57
USP37-208	ENST00000475553	DDX11L8	A8MPP1	907 aa		11.47	□□□□□ -0.57
USP37-208	ENST00000475553	TK2	O00142	265 aa		11.47	□□□□□ -0.57
USP37-208	ENST00000475553	RSPH6A	Q9H0K4	717 aa		11.47	□□□□□ -0.57
USP37-208	ENST00000475553	POTEB3	A0JP26	581 aa		11.46	□□□□□ -0.57
USP37-208	ENST00000475553	PLEKHG3	A1L390	1219 aa		11.46	□□□□□ -0.57
USP37-208	ENST00000475553	LSM11	P83369	360 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
USP37-208	ENST00000475553	FAM98C	Q17RN3	349 aa	Known RBP	11.46	□□□□□ -0.57
USP37-208	ENST00000475553	POTEB	Q6S5H4	581 aa		11.46	□□□□□ -0.57
USP37-208	ENST00000475553	ANKRD13D	Q6ZTN6	518 aa		11.45	□□□□□ -0.58
USP37-208	ENST00000475553	MRPL50	Q8N5N7	158 aa	Known RBP	11.45	□□□□□ -0.58
USP37-208	ENST00000475553	RDH13	Q8NBN7	331 aa		11.45	□□□□□ -0.58
USP37-208	ENST00000475553	LAPTM4B	Q86VI4	370 aa		11.44	□□□□□ -0.58
USP37-208	ENST00000475553	GOLGA8CP	A6NN73	597 aa		11.43	□□□□□ -0.58
USP37-208	ENST00000475553	DIXDC1	Q155Q3	683 aa		11.43	□□□□□ -0.58
USP37-208	ENST00000475553	ADGRD1	Q6QNK2	874 aa		11.43	□□□□□ -0.58
USP37-208	ENST00000475553	SWT1	Q5T5J6	900 aa	Known RBP	11.42	□□□□□ -0.58
USP37-208	ENST00000475553	NUTM1	Q86Y26	1132 aa		11.42	□□□□□ -0.58
USP37-208	ENST00000475553	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.42	□□□□□ -0.58
USP37-208	ENST00000475553	RNF40	O75150	1001 aa		11.4	□□□□□ -0.58
USP37-208	ENST00000475553	SLF2	Q8IX21	1173 aa		11.4	□□□□□ -0.58
USP37-208	ENST00000475553	GOPC	Q9HD26	462 aa		11.4	□□□□□ -0.58
USP37-208	ENST00000475553	ERICH6	Q7L0X2	663 aa		11.39	□□□□□ -0.59
USP37-208	ENST00000475553	KRTAP3-3	Q9BYR6	98 aa		11.39	□□□□□ -0.59
USP37-208	ENST00000475553	KRTAP3-2	Q9BYR7	98 aa		11.39	□□□□□ -0.59
USP37-208	ENST00000475553	CD46	P15529	392 aa		11.38	□□□□□ -0.59
USP37-208	ENST00000475553	SH3D19	Q5HYK7	790 aa		11.38	□□□□□ -0.59
USP37-208	ENST00000475553	SAMD7	Q7Z3H4	446 aa		11.38	□□□□□ -0.59
USP37-208	ENST00000475553	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.37	□□□□□ -0.59
USP37-208	ENST00000475553	ZFR	Q96KR1	1074 aa	Known RBP	11.37	□□□□□ -0.59
USP37-208	ENST00000475553	SKIV2L	Q15477	1246 aa	Known RBP	11.36	□□□□□ -0.59
USP37-208	ENST00000475553	TBC1D2	Q9BYX2	928 aa		11.36	□□□□□ -0.59
USP37-208	ENST00000475553	NECTIN2	Q92692	538 aa		11.35	□□□□□ -0.59
USP37-208	ENST00000475553	LRCH3	Q96II8	777 aa		11.35	□□□□□ -0.59
USP37-208	ENST00000475553	POLR3E	Q9NVU0	708 aa		11.35	□□□□□ -0.59
USP37-208	ENST00000475553	ANKK1	Q8NFD2	765 aa		11.33	□□□□□ -0.6
USP37-208	ENST00000475553	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.33	□□□□□ -0.6
USP37-208	ENST00000475553	KDM4A	O75164	1064 aa		11.32	□□□□□ -0.6
USP37-208	ENST00000475553	MYSM1	Q5VVJ2	828 aa		11.32	□□□□□ -0.6
USP37-208	ENST00000475553	SPIRE2	Q8WWL2	714 aa		11.32	□□□□□ -0.6
USP37-208	ENST00000475553	HR	O43593	1189 aa		11.31	□□□□□ -0.6
USP37-208	ENST00000475553	CLK2	P49760	499 aa	Known RBP	11.31	□□□□□ -0.6
USP37-208	ENST00000475553	GCGR	P47871	477 aa		11.3	□□□□□ -0.6
USP37-208	ENST00000475553	USP46	P62068	366 aa		11.3	□□□□□ -0.6
USP37-208	ENST00000475553	SLC10A3	P09131	477 aa		11.29	□□□□□ -0.6
USP37-208	ENST00000475553	KMT5B	Q4FZB7	885 aa		11.29	□□□□□ -0.6
USP37-208	ENST00000475553	GRIPAP1	Q4V328	841 aa		11.29	□□□□□ -0.6
USP37-208	ENST00000475553	RIC3	Q7Z5B4	369 aa		11.29	□□□□□ -0.6
USP37-208	ENST00000475553	C14orf37	Q86TY3	774 aa		11.29	□□□□□ -0.6
USP37-208	ENST00000475553	WNT2B	Q93097	391 aa		11.28	□□□□□ -0.6
USP37-208	ENST00000475553	CFH	P08603	1231 aa		11.27	□□□□□ -0.61
USP37-208	ENST00000475553	PPP4C	P60510	307 aa		11.26	□□□□□ -0.61
USP37-208	ENST00000475553	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.26	□□□□□ -0.61
USP37-208	ENST00000475553	PRR14	Q9BWN1	585 aa		11.26	□□□□□ -0.61
USP37-208	ENST00000475553	MOXD2P	A6NHM9	499 aa		11.24	□□□□□ -0.61
USP37-208	ENST00000475553	CSPP1	Q1MSJ5	1256 aa		11.24	□□□□□ -0.61
USP37-208	ENST00000475553	SOWAHB	A6NEL2	793 aa		11.23	□□□□□ -0.61
USP37-208	ENST00000475553	SPTLC1	O15269	473 aa		11.23	□□□□□ -0.61
USP37-208	ENST00000475553	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.23	□□□□□ -0.61
USP37-208	ENST00000475553	HPS5	Q9UPZ3	1129 aa		11.23	□□□□□ -0.61
USP37-208	ENST00000475553	NDUFV2	P19404	249 aa		11.22	□□□□□ -0.61
USP37-208	ENST00000475553	GJA5	P36382	358 aa		11.22	□□□□□ -0.61
USP37-208	ENST00000475553	TSR3	Q9UJK0	312 aa	Known RBP	11.22	□□□□□ -0.61
USP37-208	ENST00000475553	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.21	□□□□□ -0.61
USP37-208	ENST00000475553	NUTM2E	B1AL46	878 aa	Predicted RBP	11.21	□□□□□ -0.61
USP37-208	ENST00000475553	HOXA2	O43364	376 aa		11.21	□□□□□ -0.61
USP37-208	ENST00000475553	FDX1	P10109	184 aa		11.21	□□□□□ -0.61
USP37-208	ENST00000475553	BCAM	P50895	628 aa		11.21	□□□□□ -0.61
USP37-208	ENST00000475553	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.21	□□□□□ -0.61
USP37-208	ENST00000475553	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.21	□□□□□ -0.61
USP37-208	ENST00000475553	LIMD1	Q9UGP4	676 aa		11.21	□□□□□ -0.61
USP37-208	ENST00000475553	ATP6V1A	P38606	617 aa		11.2	□□□□□ -0.62
USP37-208	ENST00000475553	FUT2	Q10981	343 aa		11.2	□□□□□ -0.62
USP37-208	ENST00000475553	FLII	Q13045	1269 aa		11.19	□□□□□ -0.62
USP37-208	ENST00000475553	TUSC1	Q2TAM9	212 aa		11.19	□□□□□ -0.62
USP37-208	ENST00000475553	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
USP37-208	ENST00000475553	TIMELESS	Q9UNS1	1208 aa		11.19	□□□□□ -0.62
USP37-208	ENST00000475553	KCTD12	Q96CX2	325 aa	Known RBP	11.18	□□□□□ -0.62
USP37-208	ENST00000475553	ACTN4	O43707	911 aa	Known RBP	11.16	□□□□□ -0.62
USP37-208	ENST00000475553	ZBTB3	Q9H5J0	574 aa		11.16	□□□□□ -0.62
USP37-208	ENST00000475553	PRPF38B	Q5VTL8	546 aa	Known RBP	11.15	□□□□□ -0.62
USP37-208	ENST00000475553	PCDHB15	Q9Y5E8	787 aa		11.15	□□□□□ -0.62
USP37-208	ENST00000475553	C6orf229	H3BNL8	230 aa		11.14	□□□□□ -0.63
USP37-208	ENST00000475553	TMEM259	Q4ZIN3	620 aa		11.14	□□□□□ -0.63
USP37-208	ENST00000475553	RNF166	Q96A37	237 aa	Predicted RBP	11.14	□□□□□ -0.63
USP37-208	ENST00000475553	RFC5	P40937	340 aa		11.13	□□□□□ -0.63
USP37-208	ENST00000475553	GUCA2A	Q02747	115 aa		11.13	□□□□□ -0.63
USP37-208	ENST00000475553	THSD4	Q6ZMP0	1018 aa		11.13	□□□□□ -0.63
USP37-208	ENST00000475553	LILRB3	O75022	631 aa		11.12	□□□□□ -0.63
USP37-208	ENST00000475553	QPCT	Q16769	361 aa		11.12	□□□□□ -0.63
USP37-208	ENST00000475553		Q3C1V9	767 aa		11.12	□□□□□ -0.63
USP37-208	ENST00000475553	PUS10	Q3MIT2	529 aa	Known RBP	11.12	□□□□□ -0.63
USP37-208	ENST00000475553	PPP2R2D	Q66LE6	453 aa		11.12	□□□□□ -0.63
USP37-208	ENST00000475553	HLA-C	Q95604	372 aa		11.12	□□□□□ -0.63
USP37-208	ENST00000475553	WBP1L	Q9NX94	342 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms