RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
SPTAN1-206ENST00000475367 RPGRIP1LQ68CZ1 1315 aa13.56□□□□□ -0.24
SPTAN1-206ENST00000475367 IDI1Q13907 227 aa13.56□□□□□ -0.24
SPTAN1-206ENST00000475367 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
SPTAN1-206ENST00000475367 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
SPTAN1-206ENST00000475367 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
SPTAN1-206ENST00000475367 PRKRIP1Q9H875 184 aaPredicted RBP13.55□□□□□ -0.24
SPTAN1-206ENST00000475367 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
SPTAN1-206ENST00000475367 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-206ENST00000475367 IQGAP1P46940 1657 aa13.54□□□□□ -0.24
SPTAN1-206ENST00000475367 PREX1Q8TCU6 1659 aa13.54□□□□□ -0.24
SPTAN1-206ENST00000475367 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
SPTAN1-206ENST00000475367 PPLO60437 1756 aa13.53□□□□□ -0.24
SPTAN1-206ENST00000475367 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
SPTAN1-206ENST00000475367 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.24
SPTAN1-206ENST00000475367 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
SPTAN1-206ENST00000475367 TMF1P82094 1093 aa13.52□□□□□ -0.25
SPTAN1-206ENST00000475367 ERVK-7P63135 1459 aa13.52□□□□□ -0.25
SPTAN1-206ENST00000475367 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
SPTAN1-206ENST00000475367 NUTM2DQ5VT03 806 aaPredicted RBP13.5□□□□□ -0.25
SPTAN1-206ENST00000475367 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
SPTAN1-206ENST00000475367 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
SPTAN1-206ENST00000475367 EIF3AQ14152 1382 aaKnown RBP13.49□□□□□ -0.25
SPTAN1-206ENST00000475367 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
SPTAN1-206ENST00000475367 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
SPTAN1-206ENST00000475367 CNGB1Q14028 1251 aaPredicted RBP13.48□□□□□ -0.25
SPTAN1-206ENST00000475367 ESF1Q9H501 851 aaKnown RBP13.48□□□□□ -0.25
SPTAN1-206ENST00000475367 CCDC184Q52MB2 194 aa13.48□□□□□ -0.25
SPTAN1-206ENST00000475367 TMEM131LA2VDJ0 1609 aa13.47□□□□□ -0.25
SPTAN1-206ENST00000475367 SETBP1Q9Y6X0 1596 aa13.46□□□□□ -0.25
SPTAN1-206ENST00000475367 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.26
SPTAN1-206ENST00000475367 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
SPTAN1-206ENST00000475367 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
SPTAN1-206ENST00000475367 SPATA31D1Q6ZQQ2 1576 aa13.45□□□□□ -0.26
SPTAN1-206ENST00000475367 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
SPTAN1-206ENST00000475367 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
SPTAN1-206ENST00000475367 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
SPTAN1-206ENST00000475367 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
SPTAN1-206ENST00000475367 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
SPTAN1-206ENST00000475367 GTF3C3Q9Y5Q9 886 aa13.44□□□□□ -0.26
SPTAN1-206ENST00000475367 PANK3Q9H999 370 aa13.43□□□□□ -0.26
SPTAN1-206ENST00000475367 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
SPTAN1-206ENST00000475367 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
SPTAN1-206ENST00000475367 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
SPTAN1-206ENST00000475367 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
SPTAN1-206ENST00000475367 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
SPTAN1-206ENST00000475367 SLC24A1O60721 1099 aa13.41□□□□□ -0.26
SPTAN1-206ENST00000475367 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
SPTAN1-206ENST00000475367 RALBP1Q15311 655 aa13.4□□□□□ -0.26
SPTAN1-206ENST00000475367 MYO3AQ8NEV4 1616 aa13.39□□□□□ -0.27
SPTAN1-206ENST00000475367 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
SPTAN1-206ENST00000475367 KTN1Q86UP2 1357 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-206ENST00000475367 TNRQ92752 1358 aa13.38□□□□□ -0.27
SPTAN1-206ENST00000475367 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
SPTAN1-206ENST00000475367 RIMS2Q9UQ26 1411 aa13.37□□□□□ -0.27
SPTAN1-206ENST00000475367 HNRNPUQ00839 825 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPTAN1-206ENST00000475367 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
SPTAN1-206ENST00000475367 KDM5AP29375 1690 aaKnown RBP13.36□□□□□ -0.27
SPTAN1-206ENST00000475367 PARD3Q8TEW0 1356 aa13.36□□□□□ -0.27
SPTAN1-206ENST00000475367 STK26Q9P289 416 aa13.36□□□□□ -0.27
SPTAN1-206ENST00000475367 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
SPTAN1-206ENST00000475367 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
SPTAN1-206ENST00000475367 QRICH2Q9H0J4 1663 aa13.35□□□□□ -0.27
SPTAN1-206ENST00000475367 TMC1Q8TDI8 760 aa13.35□□□□□ -0.27
SPTAN1-206ENST00000475367 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
SPTAN1-206ENST00000475367 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
SPTAN1-206ENST00000475367 MYOM1P52179 1685 aa13.34□□□□□ -0.27
SPTAN1-206ENST00000475367 ALKQ9UM73 1620 aa13.34□□□□□ -0.27
SPTAN1-206ENST00000475367 BRD4O60885 1362 aaPredicted RBP13.33□□□□□ -0.28
SPTAN1-206ENST00000475367 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-206ENST00000475367 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
SPTAN1-206ENST00000475367 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-206ENST00000475367 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-206ENST00000475367 SAFB2Q14151 953 aaKnown RBP eCLIP13.31□□□□□ -0.28
SPTAN1-206ENST00000475367 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
SPTAN1-206ENST00000475367 NLRP13Q86W25 1043 aa13.31□□□□□ -0.28
SPTAN1-206ENST00000475367 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
SPTAN1-206ENST00000475367 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
SPTAN1-206ENST00000475367 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
SPTAN1-206ENST00000475367 PTPRMP28827 1452 aa13.29□□□□□ -0.28
SPTAN1-206ENST00000475367 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
SPTAN1-206ENST00000475367 CARD14Q9BXL6 1004 aa13.29□□□□□ -0.28
SPTAN1-206ENST00000475367 TMEM2Q9UHN6 1383 aa13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 POGKQ9P215 609 aa13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 C3P01024 1663 aa13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 PUS7Q96PZ0 661 aaKnown RBP13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 NLRP1Q9C000 1473 aa13.28□□□□□ -0.28
SPTAN1-206ENST00000475367 SLC12A5Q9H2X9 1139 aa13.27□□□□□ -0.28
SPTAN1-206ENST00000475367 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
SPTAN1-206ENST00000475367 NPC1L1Q9UHC9 1359 aa13.26□□□□□ -0.29
SPTAN1-206ENST00000475367 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
SPTAN1-206ENST00000475367 CABP2Q9NPB3 220 aa13.26□□□□□ -0.29
SPTAN1-206ENST00000475367 NRXN3Q9Y4C0 1643 aa13.25□□□□□ -0.29
SPTAN1-206ENST00000475367 BCANQ96GW7 911 aa13.25□□□□□ -0.29
SPTAN1-206ENST00000475367 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
SPTAN1-206ENST00000475367 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
SPTAN1-206ENST00000475367 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms