RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
TRAF4-210ENST00000475329 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
TRAF4-210ENST00000475329 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
TRAF4-210ENST00000475329 RPGRIP1LQ68CZ1 1315 aa19.33■□□□□ 0.69
TRAF4-210ENST00000475329 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.68
TRAF4-210ENST00000475329 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
TRAF4-210ENST00000475329 IDI1Q13907 227 aa19.31■□□□□ 0.68
TRAF4-210ENST00000475329 RIMS1Q86UR5 1692 aaKnown RBP19.29■□□□□ 0.68
TRAF4-210ENST00000475329 SETBP1Q9Y6X0 1596 aa19.27■□□□□ 0.68
TRAF4-210ENST00000475329 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
TRAF4-210ENST00000475329 TNRQ92752 1358 aa19.27■□□□□ 0.68
TRAF4-210ENST00000475329 ADAMTSL3P82987 1691 aa19.27■□□□□ 0.67
TRAF4-210ENST00000475329 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
TRAF4-210ENST00000475329 NBPF1Q3BBV0 1214 aa19.26■□□□□ 0.67
TRAF4-210ENST00000475329 ADGRF5Q8IZF2 1346 aa19.25■□□□□ 0.67
TRAF4-210ENST00000475329 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
TRAF4-210ENST00000475329 A2ML1A8K2U0 1454 aa19.24■□□□□ 0.67
TRAF4-210ENST00000475329 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
TRAF4-210ENST00000475329 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
TRAF4-210ENST00000475329 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
TRAF4-210ENST00000475329 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
TRAF4-210ENST00000475329 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
TRAF4-210ENST00000475329 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
TRAF4-210ENST00000475329 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
TRAF4-210ENST00000475329 MYO3AQ8NEV4 1616 aa19.2■□□□□ 0.66
TRAF4-210ENST00000475329 KDM4FA0A1W2PPD8 638 aa19.19■□□□□ 0.66
TRAF4-210ENST00000475329 EIF3AQ14152 1382 aaKnown RBP19.19■□□□□ 0.66
TRAF4-210ENST00000475329 ST20-MTHFSA0A0A6YYL1 179 aa19.18■□□□□ 0.66
TRAF4-210ENST00000475329 ADGRB1O14514 1584 aa19.18■□□□□ 0.66
TRAF4-210ENST00000475329 CFAP70Q5T0N1 1121 aa19.17■□□□□ 0.66
TRAF4-210ENST00000475329 KIF7Q2M1P5 1343 aa19.17■□□□□ 0.66
TRAF4-210ENST00000475329 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
TRAF4-210ENST00000475329 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
TRAF4-210ENST00000475329 C14orf93Q9H972 538 aaKnown RBP19.15■□□□□ 0.66
TRAF4-210ENST00000475329 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.66
TRAF4-210ENST00000475329 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.66
TRAF4-210ENST00000475329 CEBPAP49715 358 aaPredicted RBP19.13■□□□□ 0.65
TRAF4-210ENST00000475329 NUTM2DQ5VT03 806 aaPredicted RBP19.13■□□□□ 0.65
TRAF4-210ENST00000475329 MIER1Q8N108 512 aa19.13■□□□□ 0.65
TRAF4-210ENST00000475329 QRICH2Q9H0J4 1663 aa19.13■□□□□ 0.65
TRAF4-210ENST00000475329 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
TRAF4-210ENST00000475329 ALKQ9UM73 1620 aa19.12■□□□□ 0.65
TRAF4-210ENST00000475329 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
TRAF4-210ENST00000475329 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
TRAF4-210ENST00000475329 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRAF4-210ENST00000475329 CEP170BQ9Y4F5 1589 aaPredicted RBP19.09■□□□□ 0.65
TRAF4-210ENST00000475329 TESK2Q96S53 571 aa19.08■□□□□ 0.64
TRAF4-210ENST00000475329 TMEM2Q9UHN6 1383 aa19.07■□□□□ 0.64
TRAF4-210ENST00000475329 SLIT1O75093 1534 aa19.07■□□□□ 0.64
TRAF4-210ENST00000475329 SETD1BQ9UPS6 1966 aaKnown RBP19.07■□□□□ 0.64
TRAF4-210ENST00000475329 HDGFP51858 240 aaKnown RBP19.06■□□□□ 0.64
TRAF4-210ENST00000475329 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
TRAF4-210ENST00000475329 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
TRAF4-210ENST00000475329 TMF1P82094 1093 aa19.05■□□□□ 0.64
TRAF4-210ENST00000475329 POLR3GLQ9BT43 218 aa19.05■□□□□ 0.64
TRAF4-210ENST00000475329 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
TRAF4-210ENST00000475329 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
TRAF4-210ENST00000475329 KNDC1Q76NI1 1749 aa19.03■□□□□ 0.64
TRAF4-210ENST00000475329 PTPRMP28827 1452 aa19.03■□□□□ 0.64
TRAF4-210ENST00000475329 SLC24A1O60721 1099 aa19.02■□□□□ 0.64
TRAF4-210ENST00000475329 TMEM132EQ6IEE7 984 aa19.02■□□□□ 0.64
TRAF4-210ENST00000475329 MYOM1P52179 1685 aa19.01■□□□□ 0.63
TRAF4-210ENST00000475329 CENPJQ9HC77 1338 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-210ENST00000475329 ANP32CO43423 234 aa19.01■□□□□ 0.63
TRAF4-210ENST00000475329 YTHDC2Q9H6S0 1430 aaKnown RBP19■□□□□ 0.63
TRAF4-210ENST00000475329 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
TRAF4-210ENST00000475329 DLC1Q96QB1 1528 aa19■□□□□ 0.63
TRAF4-210ENST00000475329 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
TRAF4-210ENST00000475329 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
TRAF4-210ENST00000475329 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
TRAF4-210ENST00000475329 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
TRAF4-210ENST00000475329 DIP2AQ14689 1571 aa18.97■□□□□ 0.63
TRAF4-210ENST00000475329 EID1Q9Y6B2 187 aa18.96■□□□□ 0.63
TRAF4-210ENST00000475329 LRPPRCP42704 1394 aaKnown RBP18.94■□□□□ 0.62
TRAF4-210ENST00000475329 CPS1P31327 1500 aa18.94■□□□□ 0.62
TRAF4-210ENST00000475329 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
TRAF4-210ENST00000475329 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
TRAF4-210ENST00000475329 TULP4Q9NRJ4 1543 aa18.92■□□□□ 0.62
TRAF4-210ENST00000475329 LTKP29376 864 aa18.92■□□□□ 0.62
TRAF4-210ENST00000475329 STK26Q9P289 416 aa18.92■□□□□ 0.62
TRAF4-210ENST00000475329 BCANQ96GW7 911 aa18.91■□□□□ 0.62
TRAF4-210ENST00000475329 MED14O60244 1454 aa18.9■□□□□ 0.62
TRAF4-210ENST00000475329 METP08581 1390 aa18.9■□□□□ 0.62
TRAF4-210ENST00000475329 ABCC11Q96J66 1382 aa18.9■□□□□ 0.62
TRAF4-210ENST00000475329 CCER2I3L3R5 266 aa18.89■□□□□ 0.61
TRAF4-210ENST00000475329 TECPR2O15040 1411 aa18.89■□□□□ 0.61
TRAF4-210ENST00000475329 EVC2Q86UK5 1308 aa18.86■□□□□ 0.61
TRAF4-210ENST00000475329 PRAM1Q96QH2 718 aa18.86■□□□□ 0.61
TRAF4-210ENST00000475329 POGKQ9P215 609 aa18.86■□□□□ 0.61
TRAF4-210ENST00000475329 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
TRAF4-210ENST00000475329 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
TRAF4-210ENST00000475329 XRN1Q8IZH2 1706 aaKnown RBP18.85■□□□□ 0.61
TRAF4-210ENST00000475329 PUS7Q96PZ0 661 aaKnown RBP18.83■□□□□ 0.6
TRAF4-210ENST00000475329 KTN1Q86UP2 1357 aaKnown RBP18.82■□□□□ 0.6
TRAF4-210ENST00000475329 SAFB2Q14151 953 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRAF4-210ENST00000475329 PANK3Q9H999 370 aa18.82■□□□□ 0.6
TRAF4-210ENST00000475329 ANKLE2Q86XL3 938 aa18.81■□□□□ 0.6
TRAF4-210ENST00000475329 SIRT1Q96EB6 747 aa18.81■□□□□ 0.6
TRAF4-210ENST00000475329 TBX22Q9Y458 520 aa18.81■□□□□ 0.6
TRAF4-210ENST00000475329 CHD2O14647 1828 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms