RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 GPCPD1Q9NPB8 672 aa8.58□□□□□ -1.04
SDHB-204ENST00000475049 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
SDHB-204ENST00000475049 ANKK1Q8NFD2 765 aa8.57□□□□□ -1.04
SDHB-204ENST00000475049 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
SDHB-204ENST00000475049 ZFRQ96KR1 1074 aaKnown RBP8.57□□□□□ -1.04
SDHB-204ENST00000475049 FAM198AQ9UFP1 575 aa8.57□□□□□ -1.04
SDHB-204ENST00000475049 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
SDHB-204ENST00000475049 NUDT18Q6ZVK8 323 aa8.56□□□□□ -1.04
SDHB-204ENST00000475049 SEPT9Q9UHD8 586 aaPredicted RBP8.56□□□□□ -1.04
SDHB-204ENST00000475049 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
SDHB-204ENST00000475049 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
SDHB-204ENST00000475049 FAM98CQ17RN3 349 aaKnown RBP8.55□□□□□ -1.04
SDHB-204ENST00000475049 REPIN1Q9BWE0 567 aaKnown RBP8.55□□□□□ -1.04
SDHB-204ENST00000475049 BCAMP50895 628 aa8.54□□□□□ -1.04
SDHB-204ENST00000475049 TATDN2Q93075 761 aa8.54□□□□□ -1.04
SDHB-204ENST00000475049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.53□□□□□ -1.04
SDHB-204ENST00000475049 RCCD1A6NED2 376 aa8.53□□□□□ -1.04
SDHB-204ENST00000475049 MS4A1P11836 297 aa8.53□□□□□ -1.04
SDHB-204ENST00000475049 SSTR3P32745 418 aaPredicted RBP8.53□□□□□ -1.04
SDHB-204ENST00000475049 IFFO2Q5TF58 517 aa8.53□□□□□ -1.04
SDHB-204ENST00000475049 SMAPO00193 183 aa8.52□□□□□ -1.05
SDHB-204ENST00000475049 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
SDHB-204ENST00000475049 EYA1Q99502 592 aa8.51□□□□□ -1.05
SDHB-204ENST00000475049 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
SDHB-204ENST00000475049 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
SDHB-204ENST00000475049 DNAJB2P25686 324 aa8.5□□□□□ -1.05
SDHB-204ENST00000475049 FAM217BQ9NTX9 383 aaPredicted RBP8.5□□□□□ -1.05
SDHB-204ENST00000475049 BEGAINQ9BUH8 593 aa8.49□□□□□ -1.05
SDHB-204ENST00000475049 WBP1LQ9NX94 342 aa8.49□□□□□ -1.05
SDHB-204ENST00000475049 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
SDHB-204ENST00000475049 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
SDHB-204ENST00000475049 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.48□□□□□ -1.05
SDHB-204ENST00000475049 LRCH3Q96II8 777 aa8.47□□□□□ -1.05
SDHB-204ENST00000475049 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.06
SDHB-204ENST00000475049 SULF1Q8IWU6 871 aa8.46□□□□□ -1.06
SDHB-204ENST00000475049 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.06
SDHB-204ENST00000475049 ITGBL1O95965 494 aaPredicted RBP8.45□□□□□ -1.06
SDHB-204ENST00000475049 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
SDHB-204ENST00000475049 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
SDHB-204ENST00000475049 HPS5Q9UPZ3 1129 aa8.45□□□□□ -1.06
SDHB-204ENST00000475049 RDH13Q8NBN7 331 aa8.44□□□□□ -1.06
SDHB-204ENST00000475049 RSPH6AQ9H0K4 717 aa8.44□□□□□ -1.06
SDHB-204ENST00000475049 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
SDHB-204ENST00000475049 PCMTD1Q96MG8 357 aaPredicted RBP8.43□□□□□ -1.06
SDHB-204ENST00000475049 SLC4A3P48751 1232 aa8.42□□□□□ -1.06
SDHB-204ENST00000475049 RSPH4AQ5TD94 716 aa8.42□□□□□ -1.06
SDHB-204ENST00000475049 A0A0G2JS52 829 aa8.41□□□□□ -1.06
SDHB-204ENST00000475049 SWT1Q5T5J6 900 aaKnown RBP8.41□□□□□ -1.06
SDHB-204ENST00000475049 RNF40O75150 1001 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 CD46P15529 392 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 PPP4CP60510 307 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 SH3D19Q5HYK7 790 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 ERICH6Q7L0X2 663 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 C14orf37Q86TY3 774 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 GOPCQ9HD26 462 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
SDHB-204ENST00000475049 RGS20O76081 388 aa8.39□□□□□ -1.07
SDHB-204ENST00000475049 DIXDC1Q155Q3 683 aa8.39□□□□□ -1.07
SDHB-204ENST00000475049 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
SDHB-204ENST00000475049 TIMELESSQ9UNS1 1208 aa8.39□□□□□ -1.07
SDHB-204ENST00000475049 SKIV2LQ15477 1246 aaKnown RBP8.38□□□□□ -1.07
SDHB-204ENST00000475049 KCNC4Q03721 635 aa8.37□□□□□ -1.07
SDHB-204ENST00000475049 MYSM1Q5VVJ2 828 aa8.37□□□□□ -1.07
SDHB-204ENST00000475049 SLF2Q8IX21 1173 aa8.36□□□□□ -1.07
SDHB-204ENST00000475049 SPIRE2Q8WWL2 714 aa8.36□□□□□ -1.07
SDHB-204ENST00000475049 CLK2P49760 499 aaKnown RBP8.35□□□□□ -1.07
SDHB-204ENST00000475049 TJAP1Q5JTD0 557 aa8.34□□□□□ -1.07
SDHB-204ENST00000475049 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
SDHB-204ENST00000475049 KDM4AO75164 1064 aa8.33□□□□□ -1.08
SDHB-204ENST00000475049 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
SDHB-204ENST00000475049 SLC10A3P09131 477 aa8.32□□□□□ -1.08
SDHB-204ENST00000475049 GCGRP47871 477 aa8.32□□□□□ -1.08
SDHB-204ENST00000475049 APLP1P51693 650 aa8.32□□□□□ -1.08
SDHB-204ENST00000475049 CSPP1Q1MSJ5 1256 aa8.32□□□□□ -1.08
SDHB-204ENST00000475049 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
SDHB-204ENST00000475049 CFHP08603 1231 aa8.31□□□□□ -1.08
SDHB-204ENST00000475049 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
SDHB-204ENST00000475049 NDUFV2P19404 249 aa8.3□□□□□ -1.08
SDHB-204ENST00000475049 USP46P62068 366 aa8.3□□□□□ -1.08
SDHB-204ENST00000475049 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
SDHB-204ENST00000475049 MTRQ99707 1265 aa8.3□□□□□ -1.08
SDHB-204ENST00000475049 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
SDHB-204ENST00000475049 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
SDHB-204ENST00000475049 SPTLC1O15269 473 aa8.28□□□□□ -1.08
SDHB-204ENST00000475049 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
SDHB-204ENST00000475049 HOXA2O43364 376 aa8.27□□□□□ -1.09
SDHB-204ENST00000475049 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
SDHB-204ENST00000475049 ZNF516Q92618 1163 aa8.27□□□□□ -1.09
SDHB-204ENST00000475049 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.27□□□□□ -1.09
SDHB-204ENST00000475049 NUTM2BA6NNL0 878 aaPredicted RBP8.26□□□□□ -1.09
SDHB-204ENST00000475049 NUTM2EB1AL46 878 aaPredicted RBP8.26□□□□□ -1.09
SDHB-204ENST00000475049 FDX1P10109 184 aa8.26□□□□□ -1.09
SDHB-204ENST00000475049 FUT2Q10981 343 aa8.26□□□□□ -1.09
SDHB-204ENST00000475049 FLIIQ13045 1269 aa8.26□□□□□ -1.09
SDHB-204ENST00000475049 NUTM2DQ5VT03 806 aaPredicted RBP8.26□□□□□ -1.09
SDHB-204ENST00000475049 NUTM2AQ8IVF1 878 aaPredicted RBP8.26□□□□□ -1.09
SDHB-204ENST00000475049 GUCA2AQ02747 115 aa8.25□□□□□ -1.09
SDHB-204ENST00000475049 PCDHB15Q9Y5E8 787 aa8.25□□□□□ -1.09
SDHB-204ENST00000475049 GJA5P36382 358 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms