RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SYNMO15061 1565 aa14.34□□□□□ -0.11
PDPN-204ENST00000475043 MED14O60244 1454 aa14.34□□□□□ -0.11
PDPN-204ENST00000475043 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
PDPN-204ENST00000475043 KDM5AP29375 1690 aaKnown RBP14.33□□□□□ -0.12
PDPN-204ENST00000475043 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
PDPN-204ENST00000475043 RPRD2Q5VT52 1461 aaKnown RBP14.32□□□□□ -0.12
PDPN-204ENST00000475043 IDI1Q13907 227 aa14.32□□□□□ -0.12
PDPN-204ENST00000475043 NOS1P29475 1434 aa14.32□□□□□ -0.12
PDPN-204ENST00000475043 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
PDPN-204ENST00000475043 SLIT1O75093 1534 aa14.31□□□□□ -0.12
PDPN-204ENST00000475043 IQGAP3Q86VI3 1631 aa14.31□□□□□ -0.12
PDPN-204ENST00000475043 E9PCH4 1651 aa14.31□□□□□ -0.12
PDPN-204ENST00000475043 TXNDC2Q86VQ3 553 aa14.31□□□□□ -0.12
PDPN-204ENST00000475043 EID1Q9Y6B2 187 aa14.31□□□□□ -0.12
PDPN-204ENST00000475043 ARHGAP23Q9P227 1491 aa14.31□□□□□ -0.12
PDPN-204ENST00000475043 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
PDPN-204ENST00000475043 NUP155O75694 1391 aa14.3□□□□□ -0.12
PDPN-204ENST00000475043 CPS1P31327 1500 aa14.3□□□□□ -0.12
PDPN-204ENST00000475043 LTKP29376 864 aa14.29□□□□□ -0.12
PDPN-204ENST00000475043 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
PDPN-204ENST00000475043 SLC52A1Q9NWF4 448 aa14.29□□□□□ -0.12
PDPN-204ENST00000475043 TMEM2Q9UHN6 1383 aa14.29□□□□□ -0.12
PDPN-204ENST00000475043 ADGRB3O60242 1522 aa14.29□□□□□ -0.12
PDPN-204ENST00000475043 UBAP1LF5GYI3 381 aa14.28□□□□□ -0.12
PDPN-204ENST00000475043 MYO5BQ9ULV0 1848 aa14.28□□□□□ -0.12
PDPN-204ENST00000475043 STRCP1A6NGW2 1772 aa14.26□□□□□ -0.13
PDPN-204ENST00000475043 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
PDPN-204ENST00000475043 TMEM131LA2VDJ0 1609 aa14.23□□□□□ -0.13
PDPN-204ENST00000475043 BCANQ96GW7 911 aa14.23□□□□□ -0.13
PDPN-204ENST00000475043 NAIPQ13075 1403 aa14.23□□□□□ -0.13
PDPN-204ENST00000475043 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.13
PDPN-204ENST00000475043 PPP1R15AO75807 674 aaPredicted RBP14.21□□□□□ -0.13
PDPN-204ENST00000475043 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.13
PDPN-204ENST00000475043 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
PDPN-204ENST00000475043 TOM1O60784 492 aa14.2□□□□□ -0.14
PDPN-204ENST00000475043 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
PDPN-204ENST00000475043 LRRC7Q96NW7 1537 aa14.2□□□□□ -0.14
PDPN-204ENST00000475043 RIMS2Q9UQ26 1411 aa14.19□□□□□ -0.14
PDPN-204ENST00000475043 HDGFP51858 240 aaKnown RBP14.19□□□□□ -0.14
PDPN-204ENST00000475043 TRIM52Q96A61 297 aa14.19□□□□□ -0.14
PDPN-204ENST00000475043 HFM1A2PYH4 1435 aa14.18□□□□□ -0.14
PDPN-204ENST00000475043 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
PDPN-204ENST00000475043 XIRP1Q702N8 1843 aaKnown RBP14.16□□□□□ -0.14
PDPN-204ENST00000475043 NUTM2DQ5VT03 806 aaPredicted RBP14.16□□□□□ -0.14
PDPN-204ENST00000475043 PLEKHG1Q9ULL1 1385 aa14.15□□□□□ -0.14
PDPN-204ENST00000475043 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
PDPN-204ENST00000475043 POTEHQ6S545 545 aa14.14□□□□□ -0.15
PDPN-204ENST00000475043 KCNA6P17658 529 aa14.13□□□□□ -0.15
PDPN-204ENST00000475043 ZNF326Q5BKZ1 582 aaKnown RBP14.13□□□□□ -0.15
PDPN-204ENST00000475043 KIF1BO60333 1816 aa14.13□□□□□ -0.15
PDPN-204ENST00000475043 CLTCL1P53675 1640 aa14.12□□□□□ -0.15
PDPN-204ENST00000475043 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
PDPN-204ENST00000475043 PROSER2Q86WR7 435 aaPredicted RBP14.12□□□□□ -0.15
PDPN-204ENST00000475043 TRPM2O94759 1503 aa14.11□□□□□ -0.15
PDPN-204ENST00000475043 CHD2O14647 1828 aaKnown RBP14.11□□□□□ -0.15
PDPN-204ENST00000475043 RBM33Q96EV2 1170 aaKnown RBP14.11□□□□□ -0.15
PDPN-204ENST00000475043 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
PDPN-204ENST00000475043 HSPA1LP34931 641 aa14.1□□□□□ -0.15
PDPN-204ENST00000475043 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
PDPN-204ENST00000475043 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
PDPN-204ENST00000475043 TBX22Q9Y458 520 aa14.09□□□□□ -0.15
PDPN-204ENST00000475043 NKTRP30414 1462 aaKnown RBP14.09□□□□□ -0.15
PDPN-204ENST00000475043 DIP2AQ14689 1571 aa14.09□□□□□ -0.15
PDPN-204ENST00000475043 ADAMTS13Q76LX8 1427 aa14.07□□□□□ -0.16
PDPN-204ENST00000475043 NEXMIFQ5QGS0 1516 aa14.05□□□□□ -0.16
PDPN-204ENST00000475043 MSH6P52701 1360 aa14.04□□□□□ -0.16
PDPN-204ENST00000475043 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
PDPN-204ENST00000475043 C14orf37Q86TY3 774 aa14.03□□□□□ -0.16
PDPN-204ENST00000475043 PIK3R4Q99570 1358 aa14.03□□□□□ -0.16
PDPN-204ENST00000475043 SETBP1Q9Y6X0 1596 aa14.03□□□□□ -0.16
PDPN-204ENST00000475043 SETD5Q9C0A6 1442 aa14.02□□□□□ -0.16
PDPN-204ENST00000475043 MPHOSPH9Q99550 1183 aa14.02□□□□□ -0.17
PDPN-204ENST00000475043 AMOTL2Q9Y2J4 779 aa14.01□□□□□ -0.17
PDPN-204ENST00000475043 ROBO1Q9Y6N7 1651 aa14.01□□□□□ -0.17
PDPN-204ENST00000475043 CCDC144AA2RUR9 1427 aa13.99□□□□□ -0.17
PDPN-204ENST00000475043 PTPRUQ92729 1446 aa13.99□□□□□ -0.17
PDPN-204ENST00000475043 PPLO60437 1756 aa13.99□□□□□ -0.17
PDPN-204ENST00000475043 ACIN1Q9UKV3 1341 aaKnown RBP13.99□□□□□ -0.17
PDPN-204ENST00000475043 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
PDPN-204ENST00000475043 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
PDPN-204ENST00000475043 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
PDPN-204ENST00000475043 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
PDPN-204ENST00000475043 XRN1Q8IZH2 1706 aaKnown RBP13.98□□□□□ -0.17
PDPN-204ENST00000475043 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
PDPN-204ENST00000475043 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
PDPN-204ENST00000475043 METP08581 1390 aa13.97□□□□□ -0.17
PDPN-204ENST00000475043 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
PDPN-204ENST00000475043 RPGRIP1LQ68CZ1 1315 aa13.97□□□□□ -0.17
PDPN-204ENST00000475043 SLAIN2Q9P270 581 aa13.97□□□□□ -0.17
PDPN-204ENST00000475043 RGL3Q3MIN7 710 aa13.96□□□□□ -0.17
PDPN-204ENST00000475043 ATF3P18847 181 aa13.95□□□□□ -0.18
PDPN-204ENST00000475043 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
PDPN-204ENST00000475043 C19orf44Q9H6X5 657 aa13.95□□□□□ -0.18
PDPN-204ENST00000475043 SETD1AO15047 1707 aaKnown RBP13.94□□□□□ -0.18
PDPN-204ENST00000475043 PHLPP1O60346 1717 aa13.94□□□□□ -0.18
PDPN-204ENST00000475043 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
PDPN-204ENST00000475043 IFT172Q9UG01 1749 aa13.93□□□□□ -0.18
PDPN-204ENST00000475043 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
PDPN-204ENST00000475043 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
PDPN-204ENST00000475043 NALCNQ8IZF0 1738 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms