RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 PRR14Q9BWN1 585 aa14.36□□□□□ -0.11
SENP6-206ENST00000474906 PPP1R18Q6NYC8 613 aa14.34□□□□□ -0.11
SENP6-206ENST00000474906 NKX2-3Q8TAU0 364 aa14.34□□□□□ -0.11
SENP6-206ENST00000474906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.33□□□□□ -0.12
SENP6-206ENST00000474906 PXYLP1Q8TE99 480 aa14.33□□□□□ -0.12
SENP6-206ENST00000474906 GPR37O15354 613 aa14.32□□□□□ -0.12
SENP6-206ENST00000474906 PCDHB3Q9Y5E6 796 aa14.32□□□□□ -0.12
SENP6-206ENST00000474906 OATP04181 439 aa14.31□□□□□ -0.12
SENP6-206ENST00000474906 GNPATO15228 680 aa14.29□□□□□ -0.12
SENP6-206ENST00000474906 ZPR1O75312 459 aa14.29□□□□□ -0.12
SENP6-206ENST00000474906 FECHP22830 423 aa14.29□□□□□ -0.12
SENP6-206ENST00000474906 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.29□□□□□ -0.12
SENP6-206ENST00000474906 BLOC1S3Q6QNY0 202 aa14.28□□□□□ -0.12
SENP6-206ENST00000474906 METTL3Q86U44 580 aaKnown RBP14.28□□□□□ -0.12
SENP6-206ENST00000474906 CFHP08603 1231 aa14.27□□□□□ -0.13
SENP6-206ENST00000474906 SLC10A3P09131 477 aa14.27□□□□□ -0.13
SENP6-206ENST00000474906 KMT5BQ4FZB7 885 aa14.27□□□□□ -0.13
SENP6-206ENST00000474906 PRKD2Q9BZL6 878 aa14.26□□□□□ -0.13
SENP6-206ENST00000474906 ACTN4O43707 911 aaKnown RBP14.25□□□□□ -0.13
SENP6-206ENST00000474906 GGCXP38435 758 aa14.22□□□□□ -0.13
SENP6-206ENST00000474906 GPIHBP1Q8IV16 184 aa14.21□□□□□ -0.13
SENP6-206ENST00000474906 VSIG10Q8N0Z9 540 aa14.2□□□□□ -0.14
SENP6-206ENST00000474906 V9GY48 417 aaPredicted RBP14.2□□□□□ -0.14
SENP6-206ENST00000474906 TLL1O43897 1013 aa14.19□□□□□ -0.14
SENP6-206ENST00000474906 TMUB1Q9BVT8 246 aa14.19□□□□□ -0.14
SENP6-206ENST00000474906 LAPTM4AQ15012 233 aa14.15□□□□□ -0.14
SENP6-206ENST00000474906 Q6ZNB5 142 aa14.15□□□□□ -0.14
SENP6-206ENST00000474906 RSPH4AQ5TD94 716 aa14.14□□□□□ -0.15
SENP6-206ENST00000474906 NLRP7Q8WX94 980 aa14.14□□□□□ -0.15
SENP6-206ENST00000474906 DAXXQ9UER7 740 aaPredicted RBP14.14□□□□□ -0.15
SENP6-206ENST00000474906 RNF223E7ERA6 249 aa14.12□□□□□ -0.15
SENP6-206ENST00000474906 GFRA3O60609 400 aa14.12□□□□□ -0.15
SENP6-206ENST00000474906 NR1I2O75469 434 aa14.12□□□□□ -0.15
SENP6-206ENST00000474906 PHOX2BQ99453 314 aa14.12□□□□□ -0.15
SENP6-206ENST00000474906 PUS10Q3MIT2 529 aaKnown RBP14.09□□□□□ -0.15
SENP6-206ENST00000474906 RDH13Q8NBN7 331 aa14.09□□□□□ -0.15
SENP6-206ENST00000474906 DDX11L8A8MPP1 907 aa14.08□□□□□ -0.16
SENP6-206ENST00000474906 S1PR4O95977 384 aa14.08□□□□□ -0.16
SENP6-206ENST00000474906 ADH1BP00325 375 aa14.08□□□□□ -0.16
SENP6-206ENST00000474906 SCUBE3Q8IX30 993 aa14.06□□□□□ -0.16
SENP6-206ENST00000474906 TULP1O00294 542 aaPredicted RBP14.05□□□□□ -0.16
SENP6-206ENST00000474906 NRG2O14511 850 aaPredicted RBP14.05□□□□□ -0.16
SENP6-206ENST00000474906 ANKLE1Q8NAG6 615 aa14.05□□□□□ -0.16
SENP6-206ENST00000474906 EMID1Q96A84 441 aaPredicted RBP14.05□□□□□ -0.16
SENP6-206ENST00000474906 SULF1Q8IWU6 871 aa14.04□□□□□ -0.16
SENP6-206ENST00000474906 PPEF1O14829 653 aaPredicted RBP14.03□□□□□ -0.16
SENP6-206ENST00000474906 MAP2K5Q13163 448 aa14.03□□□□□ -0.16
SENP6-206ENST00000474906 SLC19A1P41440 591 aa14.02□□□□□ -0.17
SENP6-206ENST00000474906 FUT2Q10981 343 aa14.02□□□□□ -0.17
SENP6-206ENST00000474906 SLC6A16Q9GZN6 736 aa14.02□□□□□ -0.17
SENP6-206ENST00000474906 LCE2BO14633 110 aa14.01□□□□□ -0.17
SENP6-206ENST00000474906 GCGRP47871 477 aa14□□□□□ -0.17
SENP6-206ENST00000474906 MORN1Q5T089 497 aa14□□□□□ -0.17
SENP6-206ENST00000474906 PDZRN3Q9UPQ7 1066 aa14□□□□□ -0.17
SENP6-206ENST00000474906 SPSB2Q99619 263 aa13.99□□□□□ -0.17
SENP6-206ENST00000474906 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
SENP6-206ENST00000474906 SPRYD7Q5W111 196 aa13.96□□□□□ -0.17
SENP6-206ENST00000474906 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
SENP6-206ENST00000474906 LIAT1Q6ZQX7 453 aa13.96□□□□□ -0.17
SENP6-206ENST00000474906 IRF6O14896 467 aa13.95□□□□□ -0.18
SENP6-206ENST00000474906 THAP11Q96EK4 314 aa13.95□□□□□ -0.18
SENP6-206ENST00000474906 TRIM67Q6ZTA4 783 aa13.94□□□□□ -0.18
SENP6-206ENST00000474906 SLC27A5Q9Y2P5 690 aa13.94□□□□□ -0.18
SENP6-206ENST00000474906 PLA2G2CQ5R387 149 aa13.93□□□□□ -0.18
SENP6-206ENST00000474906 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
SENP6-206ENST00000474906 ZNF598Q86UK7 904 aaKnown RBP13.92□□□□□ -0.18
SENP6-206ENST00000474906 CD46P15529 392 aa13.91□□□□□ -0.18
SENP6-206ENST00000474906 FMNL1O95466 1100 aaPredicted RBP13.9□□□□□ -0.18
SENP6-206ENST00000474906 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
SENP6-206ENST00000474906 ZNF697Q5TEC3 545 aa13.89□□□□□ -0.19
SENP6-206ENST00000474906 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
SENP6-206ENST00000474906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
SENP6-206ENST00000474906 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
SENP6-206ENST00000474906 FAM160A2Q8N612 972 aaPredicted RBP13.87□□□□□ -0.19
SENP6-206ENST00000474906 GRIPAP1Q4V328 841 aa13.86□□□□□ -0.19
SENP6-206ENST00000474906 BRICD5Q6PL45 260 aa13.86□□□□□ -0.19
SENP6-206ENST00000474906 PRR20EP86478 221 aa13.85□□□□□ -0.19
SENP6-206ENST00000474906 PRR20CP86479 221 aa13.85□□□□□ -0.19
SENP6-206ENST00000474906 PRR20DP86480 221 aa13.85□□□□□ -0.19
SENP6-206ENST00000474906 PRR20BP86481 221 aa13.85□□□□□ -0.19
SENP6-206ENST00000474906 PRR20AP86496 221 aa13.85□□□□□ -0.19
SENP6-206ENST00000474906 RNF19BQ6ZMZ0 732 aa13.85□□□□□ -0.19
SENP6-206ENST00000474906 PRDM9Q9NQV7 894 aa13.84□□□□□ -0.19
SENP6-206ENST00000474906 FCF1Q9Y324 198 aaKnown RBP13.84□□□□□ -0.19
SENP6-206ENST00000474906 GDF9O60383 454 aa13.81□□□□□ -0.2
SENP6-206ENST00000474906 KDM4AO75164 1064 aa13.81□□□□□ -0.2
SENP6-206ENST00000474906 MSS51Q4VC12 460 aa13.81□□□□□ -0.2
SENP6-206ENST00000474906 LMOD2Q6P5Q4 547 aa13.81□□□□□ -0.2
SENP6-206ENST00000474906 TNFRSF10AO00220 468 aa13.8□□□□□ -0.2
SENP6-206ENST00000474906 GPCPD1Q9NPB8 672 aa13.79□□□□□ -0.2
SENP6-206ENST00000474906 CLCN1P35523 988 aa13.78□□□□□ -0.2
SENP6-206ENST00000474906 RPIAP49247 311 aa13.78□□□□□ -0.2
SENP6-206ENST00000474906 Q3C1V9 767 aa13.78□□□□□ -0.2
SENP6-206ENST00000474906 USP46P62068 366 aa13.77□□□□□ -0.21
SENP6-206ENST00000474906 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.21
SENP6-206ENST00000474906 PKDCCQ504Y2 493 aa13.76□□□□□ -0.21
SENP6-206ENST00000474906 HLA-CQ95604 372 aa13.75□□□□□ -0.21
SENP6-206ENST00000474906 HOXA2O43364 376 aa13.74□□□□□ -0.21
SENP6-206ENST00000474906 DGAT1O75907 488 aa13.74□□□□□ -0.21
SENP6-206ENST00000474906 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms