RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 ROCK2O75116 1388 aaKnown RBP28.66■■■□□ 2.18
EDEM3-206ENST00000474725 NBPF1Q3BBV0 1214 aa28.66■■■□□ 2.18
EDEM3-206ENST00000474725 CARD11Q9BXL7 1154 aa28.66■■■□□ 2.18
EDEM3-206ENST00000474725 RIMS1Q86UR5 1692 aaKnown RBP28.64■■■□□ 2.18
EDEM3-206ENST00000474725 NEXMIFQ5QGS0 1516 aa28.64■■■□□ 2.18
EDEM3-206ENST00000474725 NRXN1Q9ULB1 1477 aa28.62■■■□□ 2.17
EDEM3-206ENST00000474725 A2ML1A8K2U0 1454 aa28.61■■■□□ 2.17
EDEM3-206ENST00000474725 NUTM2DQ5VT03 806 aaPredicted RBP28.61■■■□□ 2.17
EDEM3-206ENST00000474725 GPRASP1Q5JY77 1395 aa28.6■■■□□ 2.17
EDEM3-206ENST00000474725 USP47Q96K76 1375 aa28.6■■■□□ 2.17
EDEM3-206ENST00000474725 VGFO15240 615 aaPredicted RBP28.58■■■□□ 2.17
EDEM3-206ENST00000474725 CFAP70Q5T0N1 1121 aa28.56■■■□□ 2.16
EDEM3-206ENST00000474725 NLRP1Q9C000 1473 aa28.55■■■□□ 2.16
EDEM3-206ENST00000474725 KIAA1210Q9ULL0 1709 aa28.54■■■□□ 2.16
EDEM3-206ENST00000474725 LAMC1P11047 1609 aa28.54■■■□□ 2.16
EDEM3-206ENST00000474725 PIK3C2GO75747 1445 aa28.54■■■□□ 2.16
EDEM3-206ENST00000474725 ZFYVE9O95405 1425 aa28.53■■■□□ 2.16
EDEM3-206ENST00000474725 DIEXFQ68CQ4 756 aaKnown RBP28.52■■■□□ 2.16
EDEM3-206ENST00000474725 UBR1Q8IWV7 1749 aa28.5■■■□□ 2.15
EDEM3-206ENST00000474725 RIMS2Q9UQ26 1411 aa28.5■■■□□ 2.15
EDEM3-206ENST00000474725 KDM5AP29375 1690 aaKnown RBP28.5■■■□□ 2.15
EDEM3-206ENST00000474725 C14orf93Q9H972 538 aaKnown RBP28.49■■■□□ 2.15
EDEM3-206ENST00000474725 ST20-MTHFSA0A0A6YYL1 179 aa28.46■■■□□ 2.15
EDEM3-206ENST00000474725 MYO3AQ8NEV4 1616 aa28.44■■■□□ 2.14
EDEM3-206ENST00000474725 SENP3Q9H4L4 574 aaPredicted RBP28.44■■■□□ 2.14
EDEM3-206ENST00000474725 C11orf95C9JLR9 678 aaPredicted RBP28.43■■■□□ 2.14
EDEM3-206ENST00000474725 TMEM2Q9UHN6 1383 aa28.42■■■□□ 2.14
EDEM3-206ENST00000474725 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.42■■■□□ 2.14
EDEM3-206ENST00000474725 IQGAP1P46940 1657 aa28.41■■■□□ 2.14
EDEM3-206ENST00000474725 PTPRMP28827 1452 aa28.41■■■□□ 2.14
EDEM3-206ENST00000474725 SCAF11Q99590 1463 aaKnown RBP28.41■■■□□ 2.14
EDEM3-206ENST00000474725 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
EDEM3-206ENST00000474725 HDGFP51858 240 aaKnown RBP28.39■■■□□ 2.14
EDEM3-206ENST00000474725 WASHC2AQ641Q2 1341 aa28.39■■■□□ 2.14
EDEM3-206ENST00000474725 TMEM132EQ6IEE7 984 aa28.38■■■□□ 2.13
EDEM3-206ENST00000474725 ADGRB1O14514 1584 aa28.37■■■□□ 2.13
EDEM3-206ENST00000474725 DDX10Q13206 875 aaKnown RBP28.37■■■□□ 2.13
EDEM3-206ENST00000474725 THEMISQ8N1K5 641 aaPredicted RBP28.35■■■□□ 2.13
EDEM3-206ENST00000474725 CEP170BQ9Y4F5 1589 aaPredicted RBP28.35■■■□□ 2.13
EDEM3-206ENST00000474725 CCDC7Q96M83 1385 aa28.34■■■□□ 2.13
EDEM3-206ENST00000474725 ALKQ9UM73 1620 aa28.33■■■□□ 2.13
EDEM3-206ENST00000474725 KIF7Q2M1P5 1343 aa28.32■■■□□ 2.12
EDEM3-206ENST00000474725 LTKP29376 864 aa28.32■■■□□ 2.12
EDEM3-206ENST00000474725 SLIT1O75093 1534 aa28.31■■■□□ 2.12
EDEM3-206ENST00000474725 ARHGAP23Q9P227 1491 aa28.31■■■□□ 2.12
EDEM3-206ENST00000474725 TESK2Q96S53 571 aa28.31■■■□□ 2.12
EDEM3-206ENST00000474725 SETD1BQ9UPS6 1966 aaKnown RBP28.3■■■□□ 2.12
EDEM3-206ENST00000474725 TXNDC2Q86VQ3 553 aa28.3■■■□□ 2.12
EDEM3-206ENST00000474725 EIF3AQ14152 1382 aaKnown RBP28.3■■■□□ 2.12
EDEM3-206ENST00000474725 ASXL1Q8IXJ9 1541 aa28.3■■■□□ 2.12
EDEM3-206ENST00000474725 POLR1AO95602 1720 aaPredicted RBP28.3■■■□□ 2.12
EDEM3-206ENST00000474725 TRAK1Q9UPV9 953 aa28.29■■■□□ 2.12
EDEM3-206ENST00000474725 EID1Q9Y6B2 187 aa28.28■■■□□ 2.12
EDEM3-206ENST00000474725 NRXN3Q9Y4C0 1643 aa28.28■■■□□ 2.12
EDEM3-206ENST00000474725 ZNF142P52746 1687 aaPredicted RBP28.27■■■□□ 2.12
EDEM3-206ENST00000474725 KDM4FA0A1W2PPD8 638 aa28.25■■■□□ 2.11
EDEM3-206ENST00000474725 BCANQ96GW7 911 aa28.25■■■□□ 2.11
EDEM3-206ENST00000474725 PLEKHG1Q9ULL1 1385 aa28.24■■■□□ 2.11
EDEM3-206ENST00000474725 POLR3GLQ9BT43 218 aa28.24■■■□□ 2.11
EDEM3-206ENST00000474725 SETD1AO15047 1707 aaKnown RBP28.23■■■□□ 2.11
EDEM3-206ENST00000474725 STK26Q9P289 416 aa28.22■■■□□ 2.11
EDEM3-206ENST00000474725 DISP3Q9P2K9 1392 aa28.21■■■□□ 2.11
EDEM3-206ENST00000474725 YTHDC2Q9H6S0 1430 aaKnown RBP28.2■■■□□ 2.11
EDEM3-206ENST00000474725 TMF1P82094 1093 aa28.2■■■□□ 2.11
EDEM3-206ENST00000474725 CENPJQ9HC77 1338 aaPredicted RBP28.19■■■□□ 2.1
EDEM3-206ENST00000474725 ADAMTS13Q76LX8 1427 aa28.18■■■□□ 2.1
EDEM3-206ENST00000474725 METP08581 1390 aa28.17■■■□□ 2.1
EDEM3-206ENST00000474725 ARHGEF28Q8N1W1 1705 aaKnown RBP28.17■■■□□ 2.1
EDEM3-206ENST00000474725 MIER1Q8N108 512 aa28.14■■■□□ 2.1
EDEM3-206ENST00000474725 LRPPRCP42704 1394 aaKnown RBP28.14■■■□□ 2.09
EDEM3-206ENST00000474725 ANKLE2Q86XL3 938 aa28.13■■■□□ 2.09
EDEM3-206ENST00000474725 SLC26A8Q96RN1 970 aa28.12■■■□□ 2.09
EDEM3-206ENST00000474725 QRICH2Q9H0J4 1663 aa28.12■■■□□ 2.09
EDEM3-206ENST00000474725 MED14O60244 1454 aa28.12■■■□□ 2.09
EDEM3-206ENST00000474725 SBNO2Q9Y2G9 1366 aa28.12■■■□□ 2.09
EDEM3-206ENST00000474725 SLC24A1O60721 1099 aa28.11■■■□□ 2.09
EDEM3-206ENST00000474725 ABCC11Q96J66 1382 aa28.09■■■□□ 2.09
EDEM3-206ENST00000474725 PRAM1Q96QH2 718 aa28.08■■■□□ 2.09
EDEM3-206ENST00000474725 TBX22Q9Y458 520 aa28.08■■■□□ 2.09
EDEM3-206ENST00000474725 SAFB2Q14151 953 aaKnown RBP eCLIP28.07■■■□□ 2.08
EDEM3-206ENST00000474725 DLC1Q96QB1 1528 aa28.06■■■□□ 2.08
EDEM3-206ENST00000474725 CDCA8Q53HL2 280 aa28.06■■■□□ 2.08
EDEM3-206ENST00000474725 POGKQ9P215 609 aa28.06■■■□□ 2.08
EDEM3-206ENST00000474725 DIP2AQ14689 1571 aa28.03■■■□□ 2.08
EDEM3-206ENST00000474725 WAPLQ7Z5K2 1190 aa28.02■■■□□ 2.08
EDEM3-206ENST00000474725 KNDC1Q76NI1 1749 aa28.01■■■□□ 2.07
EDEM3-206ENST00000474725 TECPR2O15040 1411 aa28.01■■■□□ 2.07
EDEM3-206ENST00000474725 PTPRUQ92729 1446 aa28■■■□□ 2.07
EDEM3-206ENST00000474725 PLEKHH1Q9ULM0 1364 aa28■■■□□ 2.07
EDEM3-206ENST00000474725 NCKAP5LQ9HCH0 1330 aa27.99■■■□□ 2.07
EDEM3-206ENST00000474725 SIRT1Q96EB6 747 aa27.98■■■□□ 2.07
EDEM3-206ENST00000474725 MINK1Q8N4C8 1332 aaPredicted RBP27.98■■■□□ 2.07
EDEM3-206ENST00000474725 ANP32CO43423 234 aa27.97■■■□□ 2.07
EDEM3-206ENST00000474725 CPS1P31327 1500 aa27.97■■■□□ 2.07
EDEM3-206ENST00000474725 EVC2Q86UK5 1308 aa27.97■■■□□ 2.07
EDEM3-206ENST00000474725 TULP4Q9NRJ4 1543 aa27.96■■■□□ 2.07
EDEM3-206ENST00000474725 NPHP4O75161 1426 aaPredicted RBP27.96■■■□□ 2.07
EDEM3-206ENST00000474725 AMOTL2Q9Y2J4 779 aa27.96■■■□□ 2.07
EDEM3-206ENST00000474725 FAM135BQ49AJ0 1406 aa27.95■■■□□ 2.07
EDEM3-206ENST00000474725 ROBO2Q9HCK4 1378 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms