RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-208ENST00000474707 AAASQ9NRG9 546 aa10.5□□□□□ -0.73
RABGAP1-208ENST00000474707 INSM1Q01101 510 aaPredicted RBP10.49□□□□□ -0.73
RABGAP1-208ENST00000474707 ZNF598Q86UK7 904 aaKnown RBP10.49□□□□□ -0.73
RABGAP1-208ENST00000474707 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
RABGAP1-208ENST00000474707 WDR70Q9NW82 654 aa10.48□□□□□ -0.73
RABGAP1-208ENST00000474707 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
RABGAP1-208ENST00000474707 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
RABGAP1-208ENST00000474707 TNFRSF10AO00220 468 aa10.46□□□□□ -0.73
RABGAP1-208ENST00000474707 HDGFP51858 240 aaKnown RBP10.45□□□□□ -0.74
RABGAP1-208ENST00000474707 WIPF1O43516 503 aa10.44□□□□□ -0.74
RABGAP1-208ENST00000474707 NPDC1Q9NQX5 325 aaPredicted RBP10.44□□□□□ -0.74
RABGAP1-208ENST00000474707 ZPR1O75312 459 aa10.43□□□□□ -0.74
RABGAP1-208ENST00000474707 ZNF697Q5TEC3 545 aa10.43□□□□□ -0.74
RABGAP1-208ENST00000474707 PADI6Q6TGC4 694 aa10.43□□□□□ -0.74
RABGAP1-208ENST00000474707 NFX1Q12986 1120 aaKnown RBP10.42□□□□□ -0.74
RABGAP1-208ENST00000474707 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
RABGAP1-208ENST00000474707 PAXIP1Q6ZW49 1069 aaPredicted RBP10.42□□□□□ -0.74
RABGAP1-208ENST00000474707 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
RABGAP1-208ENST00000474707 GDF9O60383 454 aa10.41□□□□□ -0.74
RABGAP1-208ENST00000474707 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
RABGAP1-208ENST00000474707 DACH1Q9UI36 760 aa10.4□□□□□ -0.74
RABGAP1-208ENST00000474707 C11orf95C9JLR9 678 aaPredicted RBP10.39□□□□□ -0.75
RABGAP1-208ENST00000474707 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
RABGAP1-208ENST00000474707 SLF2Q8IX21 1173 aa10.39□□□□□ -0.75
RABGAP1-208ENST00000474707 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
RABGAP1-208ENST00000474707 EYA1Q99502 592 aa10.37□□□□□ -0.75
RABGAP1-208ENST00000474707 GMPR2Q9P2T1 348 aaKnown RBP10.37□□□□□ -0.75
RABGAP1-208ENST00000474707 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
RABGAP1-208ENST00000474707 SLC4A3P48751 1232 aa10.31□□□□□ -0.76
RABGAP1-208ENST00000474707 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
RABGAP1-208ENST00000474707 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
RABGAP1-208ENST00000474707 PRR14Q9BWN1 585 aa10.3□□□□□ -0.76
RABGAP1-208ENST00000474707 PCDHB3Q9Y5E6 796 aa10.3□□□□□ -0.76
RABGAP1-208ENST00000474707 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
RABGAP1-208ENST00000474707 CRIPAKQ8N1N5 446 aa10.29□□□□□ -0.76
RABGAP1-208ENST00000474707 TLL1O43897 1013 aa10.28□□□□□ -0.76
RABGAP1-208ENST00000474707 S1PR4O95977 384 aa10.28□□□□□ -0.76
RABGAP1-208ENST00000474707 FOXC1Q12948 553 aa10.28□□□□□ -0.76
RABGAP1-208ENST00000474707 BLOC1S3Q6QNY0 202 aa10.28□□□□□ -0.76
RABGAP1-208ENST00000474707 AXIN1O15169 862 aa10.27□□□□□ -0.77
RABGAP1-208ENST00000474707 PTGDRQ13258 359 aa10.27□□□□□ -0.77
RABGAP1-208ENST00000474707 SUZ12Q15022 739 aaKnown RBP10.27□□□□□ -0.77
RABGAP1-208ENST00000474707 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
RABGAP1-208ENST00000474707 DNAJB2P25686 324 aa10.26□□□□□ -0.77
RABGAP1-208ENST00000474707 RTN4Q9NQC3 1192 aaKnown RBP10.26□□□□□ -0.77
RABGAP1-208ENST00000474707 FAM181BA6NEQ2 426 aa10.25□□□□□ -0.77
RABGAP1-208ENST00000474707 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
RABGAP1-208ENST00000474707 PKD2L1Q9P0L9 805 aa10.24□□□□□ -0.77
RABGAP1-208ENST00000474707 ADGRG1Q9Y653 693 aa10.24□□□□□ -0.77
RABGAP1-208ENST00000474707 TERTO14746 1132 aaKnown RBP10.23□□□□□ -0.77
RABGAP1-208ENST00000474707 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
RABGAP1-208ENST00000474707 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
RABGAP1-208ENST00000474707 AVPP01185 164 aa10.22□□□□□ -0.77
RABGAP1-208ENST00000474707 PLA2G2CQ5R387 149 aa10.21□□□□□ -0.77
RABGAP1-208ENST00000474707 RCCD1A6NED2 376 aa10.2□□□□□ -0.78
RABGAP1-208ENST00000474707 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
RABGAP1-208ENST00000474707 KMT5BQ4FZB7 885 aa10.19□□□□□ -0.78
RABGAP1-208ENST00000474707 CTC1Q2NKJ3 1217 aa10.18□□□□□ -0.78
RABGAP1-208ENST00000474707 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
RABGAP1-208ENST00000474707 TSHZ2Q9NRE2 1034 aa10.18□□□□□ -0.78
RABGAP1-208ENST00000474707 CFHP08603 1231 aa10.17□□□□□ -0.78
RABGAP1-208ENST00000474707 FAM161AQ3B820 660 aa10.17□□□□□ -0.78
RABGAP1-208ENST00000474707 SLC10A3P09131 477 aa10.16□□□□□ -0.78
RABGAP1-208ENST00000474707 SNRPBP14678 240 aaKnown RBP10.16□□□□□ -0.78
RABGAP1-208ENST00000474707 TOR4AQ9NXH8 423 aa10.16□□□□□ -0.78
RABGAP1-208ENST00000474707 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
RABGAP1-208ENST00000474707 SMCPP49901 116 aaPredicted RBP10.15□□□□□ -0.78
RABGAP1-208ENST00000474707 CYP4X1Q8N118 509 aa10.14□□□□□ -0.79
RABGAP1-208ENST00000474707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
RABGAP1-208ENST00000474707 ADH1BP00325 375 aa10.13□□□□□ -0.79
RABGAP1-208ENST00000474707 FCHSD2O94868 740 aa10.12□□□□□ -0.79
RABGAP1-208ENST00000474707 SLC6A16Q9GZN6 736 aa10.12□□□□□ -0.79
RABGAP1-208ENST00000474707 NR1I2O75469 434 aa10.11□□□□□ -0.79
RABGAP1-208ENST00000474707 ZSCAN1Q8NBB4 408 aa10.11□□□□□ -0.79
RABGAP1-208ENST00000474707 PXYLP1Q8TE99 480 aa10.1□□□□□ -0.79
RABGAP1-208ENST00000474707 ATP13A2Q9NQ11 1180 aa10.09□□□□□ -0.79
RABGAP1-208ENST00000474707 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
RABGAP1-208ENST00000474707 OATP04181 439 aa10.07□□□□□ -0.8
RABGAP1-208ENST00000474707 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
RABGAP1-208ENST00000474707 SEMA3EO15041 775 aa10.06□□□□□ -0.8
RABGAP1-208ENST00000474707 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
RABGAP1-208ENST00000474707 TRIM47Q96LD4 638 aa10.06□□□□□ -0.8
RABGAP1-208ENST00000474707 TTC24A2A3L6 582 aaPredicted RBP10.05□□□□□ -0.8
RABGAP1-208ENST00000474707 GMPRP36959 345 aa10.05□□□□□ -0.8
RABGAP1-208ENST00000474707 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
RABGAP1-208ENST00000474707 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
RABGAP1-208ENST00000474707 SENP2Q9HC62 589 aa10.05□□□□□ -0.8
RABGAP1-208ENST00000474707 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
RABGAP1-208ENST00000474707 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
RABGAP1-208ENST00000474707 RPIAP49247 311 aa10.03□□□□□ -0.8
RABGAP1-208ENST00000474707 HIC1Q14526 733 aa10.03□□□□□ -0.8
RABGAP1-208ENST00000474707 SPSB2Q99619 263 aa10.02□□□□□ -0.81
RABGAP1-208ENST00000474707 RSPH4AQ5TD94 716 aa10.01□□□□□ -0.81
RABGAP1-208ENST00000474707 MORN1Q5T089 497 aa9.98□□□□□ -0.81
RABGAP1-208ENST00000474707 RBM26Q5T8P6 1007 aaKnown RBP9.97□□□□□ -0.81
RABGAP1-208ENST00000474707 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
RABGAP1-208ENST00000474707 THAP11Q96EK4 314 aa9.97□□□□□ -0.81
RABGAP1-208ENST00000474707 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
RABGAP1-208ENST00000474707 TESPA1A2RU30 521 aaPredicted RBP9.96□□□□□ -0.82
RABGAP1-208ENST00000474707 GPR37O15354 613 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms