RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 SCAF11Q99590 1463 aaKnown RBP13.58□□□□□ -0.24
TNFRSF9-202ENST00000474475 SYNMO15061 1565 aa13.58□□□□□ -0.24
TNFRSF9-202ENST00000474475 ANKRD50Q9ULJ7 1429 aa13.57□□□□□ -0.24
TNFRSF9-202ENST00000474475 LTKP29376 864 aa13.57□□□□□ -0.24
TNFRSF9-202ENST00000474475 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
TNFRSF9-202ENST00000474475 NOS1P29475 1434 aa13.56□□□□□ -0.24
TNFRSF9-202ENST00000474475 IDI1Q13907 227 aa13.55□□□□□ -0.24
TNFRSF9-202ENST00000474475 TXNDC2Q86VQ3 553 aa13.55□□□□□ -0.24
TNFRSF9-202ENST00000474475 ALKQ9UM73 1620 aa13.54□□□□□ -0.24
TNFRSF9-202ENST00000474475 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
TNFRSF9-202ENST00000474475 LRRC7Q96NW7 1537 aa13.54□□□□□ -0.24
TNFRSF9-202ENST00000474475 UNC13BO14795 1591 aa13.53□□□□□ -0.24
TNFRSF9-202ENST00000474475 TET3O43151 1660 aa13.53□□□□□ -0.24
TNFRSF9-202ENST00000474475 TOM1O60784 492 aa13.52□□□□□ -0.25
TNFRSF9-202ENST00000474475 ADGRB3O60242 1522 aa13.51□□□□□ -0.25
TNFRSF9-202ENST00000474475 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-202ENST00000474475 ROCK1Q13464 1354 aa13.51□□□□□ -0.25
TNFRSF9-202ENST00000474475 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
TNFRSF9-202ENST00000474475 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-202ENST00000474475 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
TNFRSF9-202ENST00000474475 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
TNFRSF9-202ENST00000474475 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
TNFRSF9-202ENST00000474475 HSPA1LP34931 641 aa13.49□□□□□ -0.25
TNFRSF9-202ENST00000474475 SLC52A1Q9NWF4 448 aa13.48□□□□□ -0.25
TNFRSF9-202ENST00000474475 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
TNFRSF9-202ENST00000474475 E9PCH4 1651 aa13.47□□□□□ -0.25
TNFRSF9-202ENST00000474475 IQGAP3Q86VI3 1631 aa13.47□□□□□ -0.25
TNFRSF9-202ENST00000474475 ITGAEP38570 1179 aa13.47□□□□□ -0.25
TNFRSF9-202ENST00000474475 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.25
TNFRSF9-202ENST00000474475 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.26
TNFRSF9-202ENST00000474475 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
TNFRSF9-202ENST00000474475 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
TNFRSF9-202ENST00000474475 NUP155O75694 1391 aa13.43□□□□□ -0.26
TNFRSF9-202ENST00000474475 POLA2Q14181 598 aa13.42□□□□□ -0.26
TNFRSF9-202ENST00000474475 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
TNFRSF9-202ENST00000474475 RIMS2Q9UQ26 1411 aa13.41□□□□□ -0.26
TNFRSF9-202ENST00000474475 KCNA6P17658 529 aa13.41□□□□□ -0.26
TNFRSF9-202ENST00000474475 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF9-202ENST00000474475 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
TNFRSF9-202ENST00000474475 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
TNFRSF9-202ENST00000474475 PLEKHG1Q9ULL1 1385 aa13.4□□□□□ -0.26
TNFRSF9-202ENST00000474475 BCANQ96GW7 911 aa13.39□□□□□ -0.27
TNFRSF9-202ENST00000474475 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
TNFRSF9-202ENST00000474475 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
TNFRSF9-202ENST00000474475 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
TNFRSF9-202ENST00000474475 ABCB7O75027 752 aa13.37□□□□□ -0.27
TNFRSF9-202ENST00000474475 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF9-202ENST00000474475 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF9-202ENST00000474475 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
TNFRSF9-202ENST00000474475 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
TNFRSF9-202ENST00000474475 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
TNFRSF9-202ENST00000474475 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF9-202ENST00000474475 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
TNFRSF9-202ENST00000474475 NAIPQ13075 1403 aa13.35□□□□□ -0.27
TNFRSF9-202ENST00000474475 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
TNFRSF9-202ENST00000474475 FAM135BQ49AJ0 1406 aa13.34□□□□□ -0.27
TNFRSF9-202ENST00000474475 DSG3P32926 999 aa13.34□□□□□ -0.27
TNFRSF9-202ENST00000474475 TBX22Q9Y458 520 aa13.34□□□□□ -0.27
TNFRSF9-202ENST00000474475 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
TNFRSF9-202ENST00000474475 ROBO1Q9Y6N7 1651 aa13.32□□□□□ -0.28
TNFRSF9-202ENST00000474475 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF9-202ENST00000474475 MSH6P52701 1360 aa13.31□□□□□ -0.28
TNFRSF9-202ENST00000474475 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
TNFRSF9-202ENST00000474475 NRXN3Q9Y4C0 1643 aa13.3□□□□□ -0.28
TNFRSF9-202ENST00000474475 TRPM2O94759 1503 aa13.29□□□□□ -0.28
TNFRSF9-202ENST00000474475 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
TNFRSF9-202ENST00000474475 HFM1A2PYH4 1435 aa13.29□□□□□ -0.28
TNFRSF9-202ENST00000474475 PTPRUQ92729 1446 aa13.28□□□□□ -0.28
TNFRSF9-202ENST00000474475 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
TNFRSF9-202ENST00000474475 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
TNFRSF9-202ENST00000474475 NCOA3Q9Y6Q9 1424 aa13.27□□□□□ -0.29
TNFRSF9-202ENST00000474475 ZNF326Q5BKZ1 582 aaKnown RBP13.26□□□□□ -0.29
TNFRSF9-202ENST00000474475 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
TNFRSF9-202ENST00000474475 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
TNFRSF9-202ENST00000474475 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF9-202ENST00000474475 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
TNFRSF9-202ENST00000474475 KIF1BO60333 1816 aa13.25□□□□□ -0.29
TNFRSF9-202ENST00000474475 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
TNFRSF9-202ENST00000474475 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
TNFRSF9-202ENST00000474475 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
TNFRSF9-202ENST00000474475 METP08581 1390 aa13.22□□□□□ -0.29
TNFRSF9-202ENST00000474475 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
TNFRSF9-202ENST00000474475 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF9-202ENST00000474475 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF9-202ENST00000474475 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
TNFRSF9-202ENST00000474475 ATF3P18847 181 aa13.19□□□□□ -0.3
TNFRSF9-202ENST00000474475 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
TNFRSF9-202ENST00000474475 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF9-202ENST00000474475 DCCP43146 1447 aa13.17□□□□□ -0.3
TNFRSF9-202ENST00000474475 JCADQ9P266 1359 aa13.17□□□□□ -0.3
TNFRSF9-202ENST00000474475 PPLO60437 1756 aa13.17□□□□□ -0.3
TNFRSF9-202ENST00000474475 FKBP8Q14318 412 aa13.16□□□□□ -0.3
TNFRSF9-202ENST00000474475 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
TNFRSF9-202ENST00000474475 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
TNFRSF9-202ENST00000474475 MST1RQ04912 1400 aa13.15□□□□□ -0.3
TNFRSF9-202ENST00000474475 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF9-202ENST00000474475 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
TNFRSF9-202ENST00000474475 ADGRL3Q9HAR2 1447 aa13.14□□□□□ -0.31
TNFRSF9-202ENST00000474475 ASXL1Q8IXJ9 1541 aa13.14□□□□□ -0.31
TNFRSF9-202ENST00000474475 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms