RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CFAP65Q6ZU64 1925 aaKnown RBP8.17□□□□□ -1.1
SNRNP40-204ENST00000474025 ZBTB12Q9Y330 459 aaPredicted RBP8.17□□□□□ -1.1
SNRNP40-204ENST00000474025 TMEM2Q9UHN6 1383 aa8.17□□□□□ -1.1
SNRNP40-204ENST00000474025 ERBINQ96RT1 1412 aa8.17□□□□□ -1.1
SNRNP40-204ENST00000474025 TMEM94Q12767 1356 aa8.16□□□□□ -1.1
SNRNP40-204ENST00000474025 MAP3K1Q13233 1512 aa8.16□□□□□ -1.1
SNRNP40-204ENST00000474025 KANK4Q5T7N3 995 aaPredicted RBP8.16□□□□□ -1.1
SNRNP40-204ENST00000474025 POTEHQ6S545 545 aa8.16□□□□□ -1.1
SNRNP40-204ENST00000474025 EID1Q9Y6B2 187 aa8.16□□□□□ -1.1
SNRNP40-204ENST00000474025 CROCC2H7BZ55 1655 aa8.15□□□□□ -1.1
SNRNP40-204ENST00000474025 KDM5AP29375 1690 aaKnown RBP8.15□□□□□ -1.1
SNRNP40-204ENST00000474025 EFCAB6Q5THR3 1501 aa8.15□□□□□ -1.1
SNRNP40-204ENST00000474025 ABCC5O15440 1437 aa8.15□□□□□ -1.1
SNRNP40-204ENST00000474025 TET3O43151 1660 aa8.14□□□□□ -1.11
SNRNP40-204ENST00000474025 LMTK2Q8IWU2 1503 aa8.14□□□□□ -1.11
SNRNP40-204ENST00000474025 POTEAQ6S8J7 498 aa8.14□□□□□ -1.11
SNRNP40-204ENST00000474025 ROBO1Q9Y6N7 1651 aa8.14□□□□□ -1.11
SNRNP40-204ENST00000474025 NWD1Q149M9 1564 aa8.14□□□□□ -1.11
SNRNP40-204ENST00000474025 NKTRP30414 1462 aaKnown RBP8.13□□□□□ -1.11
SNRNP40-204ENST00000474025 KCNA6P17658 529 aa8.13□□□□□ -1.11
SNRNP40-204ENST00000474025 RRP7BPQ9NSQ0 103 aa8.13□□□□□ -1.11
SNRNP40-204ENST00000474025 ADGRB3O60242 1522 aa8.13□□□□□ -1.11
SNRNP40-204ENST00000474025 NOS1P29475 1434 aa8.12□□□□□ -1.11
SNRNP40-204ENST00000474025 DAPK1P53355 1430 aa8.12□□□□□ -1.11
SNRNP40-204ENST00000474025 KANK1Q14678 1352 aa8.12□□□□□ -1.11
SNRNP40-204ENST00000474025 PTPN23Q9H3S7 1636 aa8.12□□□□□ -1.11
SNRNP40-204ENST00000474025 IDI1Q13907 227 aa8.12□□□□□ -1.11
SNRNP40-204ENST00000474025 SLC26A8Q96RN1 970 aa8.12□□□□□ -1.11
SNRNP40-204ENST00000474025 STAG3Q9UJ98 1225 aa8.12□□□□□ -1.11
SNRNP40-204ENST00000474025 PROSER2Q86WR7 435 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-204ENST00000474025 RBM33Q96EV2 1170 aaKnown RBP8.11□□□□□ -1.11
SNRNP40-204ENST00000474025 FGD6Q6ZV73 1430 aa8.1□□□□□ -1.11
SNRNP40-204ENST00000474025 MSH6P52701 1360 aa8.1□□□□□ -1.11
SNRNP40-204ENST00000474025 SETD1AO15047 1707 aaKnown RBP8.09□□□□□ -1.11
SNRNP40-204ENST00000474025 ZFYVE9O95405 1425 aa8.09□□□□□ -1.11
SNRNP40-204ENST00000474025 ANKRD30AQ9BXX3 1397 aa8.09□□□□□ -1.12
SNRNP40-204ENST00000474025 JCADQ9P266 1359 aa8.09□□□□□ -1.12
SNRNP40-204ENST00000474025 EP400Q96L91 3159 aa8.08□□□□□ -1.12
SNRNP40-204ENST00000474025 COL16A1Q07092 1604 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-204ENST00000474025 SLC52A1Q9NWF4 448 aa8.08□□□□□ -1.12
SNRNP40-204ENST00000474025 SLAIN2Q9P270 581 aa8.08□□□□□ -1.12
SNRNP40-204ENST00000474025 PHLPP1O60346 1717 aa8.08□□□□□ -1.12
SNRNP40-204ENST00000474025 PLEKHG1Q9ULL1 1385 aa8.08□□□□□ -1.12
SNRNP40-204ENST00000474025 ADGRL2O95490 1459 aa8.07□□□□□ -1.12
SNRNP40-204ENST00000474025 RPRD2Q5VT52 1461 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-204ENST00000474025 LOC105371045A0A1W2PR82 267 aa8.07□□□□□ -1.12
SNRNP40-204ENST00000474025 CHIC2Q9UKJ5 165 aa8.07□□□□□ -1.12
SNRNP40-204ENST00000474025 RIMS2Q9UQ26 1411 aa8.06□□□□□ -1.12
SNRNP40-204ENST00000474025 LRP6O75581 1613 aa8.06□□□□□ -1.12
SNRNP40-204ENST00000474025 CHD2O14647 1828 aaKnown RBP8.06□□□□□ -1.12
SNRNP40-204ENST00000474025 NCOA3Q9Y6Q9 1424 aa8.05□□□□□ -1.12
SNRNP40-204ENST00000474025 TMEM131LA2VDJ0 1609 aa8.05□□□□□ -1.12
SNRNP40-204ENST00000474025 BCANQ96GW7 911 aa8.05□□□□□ -1.12
SNRNP40-204ENST00000474025 GCC2Q8IWJ2 1684 aa8.05□□□□□ -1.12
SNRNP40-204ENST00000474025 ANKRD50Q9ULJ7 1429 aa8.04□□□□□ -1.12
SNRNP40-204ENST00000474025 AHDC1Q5TGY3 1603 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-204ENST00000474025 MYO5BQ9ULV0 1848 aa8.04□□□□□ -1.12
SNRNP40-204ENST00000474025 AKT1S1Q96B36 256 aa8.04□□□□□ -1.12
SNRNP40-204ENST00000474025 SPATA31A6Q5VVP1 1343 aa8.03□□□□□ -1.12
SNRNP40-204ENST00000474025 ADAMTS13Q76LX8 1427 aa8.03□□□□□ -1.12
SNRNP40-204ENST00000474025 SHPRHQ149N8 1683 aa8.03□□□□□ -1.12
SNRNP40-204ENST00000474025 DIP2AQ14689 1571 aa8.03□□□□□ -1.12
SNRNP40-204ENST00000474025 PPP1R15AO75807 674 aaPredicted RBP8.03□□□□□ -1.12
SNRNP40-204ENST00000474025 TBX22Q9Y458 520 aa8.03□□□□□ -1.12
SNRNP40-204ENST00000474025 PIK3R4Q99570 1358 aa8.02□□□□□ -1.13
SNRNP40-204ENST00000474025 UPF1Q92900 1129 aaKnown RBP eCLIP8.02□□□□□ -1.13
SNRNP40-204ENST00000474025 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.02□□□□□ -1.13
SNRNP40-204ENST00000474025 UNC13BO14795 1591 aa8.01□□□□□ -1.13
SNRNP40-204ENST00000474025 HDGFP51858 240 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-204ENST00000474025 ZNF772Q68DY9 489 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-204ENST00000474025 C14orf37Q86TY3 774 aa8.01□□□□□ -1.13
SNRNP40-204ENST00000474025 CADPS2Q86UW7 1296 aa8.01□□□□□ -1.13
SNRNP40-204ENST00000474025 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.01□□□□□ -1.13
SNRNP40-204ENST00000474025 C19orf44Q9H6X5 657 aa8.01□□□□□ -1.13
SNRNP40-204ENST00000474025 ATF3P18847 181 aa8□□□□□ -1.13
SNRNP40-204ENST00000474025 MEX3CQ5U5Q3 659 aaKnown RBP8□□□□□ -1.13
SNRNP40-204ENST00000474025 CHRDL2Q6WN34 429 aa8□□□□□ -1.13
SNRNP40-204ENST00000474025 TRIM52Q96A61 297 aa8□□□□□ -1.13
SNRNP40-204ENST00000474025 DCCP43146 1447 aa8□□□□□ -1.13
SNRNP40-204ENST00000474025 PTPRUQ92729 1446 aa8□□□□□ -1.13
SNRNP40-204ENST00000474025 CDK12Q9NYV4 1490 aaPredicted RBP8□□□□□ -1.13
SNRNP40-204ENST00000474025 TRPM2O94759 1503 aa7.99□□□□□ -1.13
SNRNP40-204ENST00000474025 E9PCH4 1651 aa7.99□□□□□ -1.13
SNRNP40-204ENST00000474025 NUTM2DQ5VT03 806 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-204ENST00000474025 BRINP3Q76B58 766 aa7.99□□□□□ -1.13
SNRNP40-204ENST00000474025 ASXL1Q8IXJ9 1541 aa7.98□□□□□ -1.13
SNRNP40-204ENST00000474025 SETD5Q9C0A6 1442 aa7.98□□□□□ -1.13
SNRNP40-204ENST00000474025 CHGAP10645 457 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-204ENST00000474025 FAM50AQ14320 339 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-204ENST00000474025 IQGAP3Q86VI3 1631 aa7.98□□□□□ -1.13
SNRNP40-204ENST00000474025 XRN1Q8IZH2 1706 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-204ENST00000474025 NHSL1Q5SYE7 1610 aa7.97□□□□□ -1.13
SNRNP40-204ENST00000474025 RXRBP28702 533 aa7.97□□□□□ -1.13
SNRNP40-204ENST00000474025 AMOTL2Q9Y2J4 779 aa7.97□□□□□ -1.13
SNRNP40-204ENST00000474025 AFF2P51816 1311 aa7.97□□□□□ -1.13
SNRNP40-204ENST00000474025 SETBP1Q9Y6X0 1596 aa7.97□□□□□ -1.13
SNRNP40-204ENST00000474025 NRXN3Q9Y4C0 1643 aa7.96□□□□□ -1.13
SNRNP40-204ENST00000474025 MST1RQ04912 1400 aa7.96□□□□□ -1.13
SNRNP40-204ENST00000474025 NUTM2BA6NNL0 878 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-204ENST00000474025 NUTM2EB1AL46 878 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms