RNA–Protein interactions for RNA: ENST00000474008.1

SRCAP-204, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-204ENST00000474008 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
SRCAP-204ENST00000474008 CROCC2H7BZ55 1655 aa18.58■□□□□ 0.57
SRCAP-204ENST00000474008 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.56
SRCAP-204ENST00000474008 EID1Q9Y6B2 187 aa18.58■□□□□ 0.56
SRCAP-204ENST00000474008 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
SRCAP-204ENST00000474008 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
SRCAP-204ENST00000474008 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
SRCAP-204ENST00000474008 KANK1Q14678 1352 aa18.55■□□□□ 0.56
SRCAP-204ENST00000474008 SYNMO15061 1565 aa18.54■□□□□ 0.56
SRCAP-204ENST00000474008 TMEM94Q12767 1356 aa18.54■□□□□ 0.56
SRCAP-204ENST00000474008 NOS1P29475 1434 aa18.52■□□□□ 0.56
SRCAP-204ENST00000474008 XIRP1Q702N8 1843 aaKnown RBP18.51■□□□□ 0.55
SRCAP-204ENST00000474008 EFCAB6Q5THR3 1501 aa18.5■□□□□ 0.55
SRCAP-204ENST00000474008 LMTK2Q8IWU2 1503 aa18.5■□□□□ 0.55
SRCAP-204ENST00000474008 KCNA6P17658 529 aa18.5■□□□□ 0.55
SRCAP-204ENST00000474008 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
SRCAP-204ENST00000474008 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
SRCAP-204ENST00000474008 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
SRCAP-204ENST00000474008 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
SRCAP-204ENST00000474008 BCANQ96GW7 911 aa18.49■□□□□ 0.55
SRCAP-204ENST00000474008 TET3O43151 1660 aa18.48■□□□□ 0.55
SRCAP-204ENST00000474008 ANKRD50Q9ULJ7 1429 aa18.46■□□□□ 0.55
SRCAP-204ENST00000474008 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
SRCAP-204ENST00000474008 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
SRCAP-204ENST00000474008 SLC52A1Q9NWF4 448 aa18.44■□□□□ 0.54
SRCAP-204ENST00000474008 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
SRCAP-204ENST00000474008 FAM135BQ49AJ0 1406 aa18.42■□□□□ 0.54
SRCAP-204ENST00000474008 ITGAEP38570 1179 aa18.42■□□□□ 0.54
SRCAP-204ENST00000474008 POTEAQ6S8J7 498 aa18.42■□□□□ 0.54
SRCAP-204ENST00000474008 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
SRCAP-204ENST00000474008 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
SRCAP-204ENST00000474008 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
SRCAP-204ENST00000474008 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
SRCAP-204ENST00000474008 SLAIN2Q9P270 581 aa18.38■□□□□ 0.53
SRCAP-204ENST00000474008 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
SRCAP-204ENST00000474008 MYO5BQ9ULV0 1848 aa18.35■□□□□ 0.53
SRCAP-204ENST00000474008 ROBO1Q9Y6N7 1651 aa18.35■□□□□ 0.53
SRCAP-204ENST00000474008 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
SRCAP-204ENST00000474008 ADAMTS13Q76LX8 1427 aa18.33■□□□□ 0.53
SRCAP-204ENST00000474008 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
SRCAP-204ENST00000474008 TMEM131LA2VDJ0 1609 aa18.33■□□□□ 0.52
SRCAP-204ENST00000474008 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
SRCAP-204ENST00000474008 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
SRCAP-204ENST00000474008 MSH6P52701 1360 aa18.32■□□□□ 0.52
SRCAP-204ENST00000474008 TBX22Q9Y458 520 aa18.32■□□□□ 0.52
SRCAP-204ENST00000474008 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
SRCAP-204ENST00000474008 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
SRCAP-204ENST00000474008 NUP155O75694 1391 aa18.3■□□□□ 0.52
SRCAP-204ENST00000474008 E9PCH4 1651 aa18.29■□□□□ 0.52
SRCAP-204ENST00000474008 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
SRCAP-204ENST00000474008 PTPRUQ92729 1446 aa18.29■□□□□ 0.52
SRCAP-204ENST00000474008 UNC13BO14795 1591 aa18.28■□□□□ 0.52
SRCAP-204ENST00000474008 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
SRCAP-204ENST00000474008 ROCK1Q13464 1354 aa18.26■□□□□ 0.51
SRCAP-204ENST00000474008 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
SRCAP-204ENST00000474008 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
SRCAP-204ENST00000474008 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.25■□□□□ 0.51
SRCAP-204ENST00000474008 LRP6O75581 1613 aa18.23■□□□□ 0.51
SRCAP-204ENST00000474008 JCADQ9P266 1359 aa18.22■□□□□ 0.51
SRCAP-204ENST00000474008 CAPN15O75808 1086 aa18.22■□□□□ 0.51
SRCAP-204ENST00000474008 C19orf44Q9H6X5 657 aa18.22■□□□□ 0.51
SRCAP-204ENST00000474008 PHLPP1O60346 1717 aa18.21■□□□□ 0.51
SRCAP-204ENST00000474008 DDX17Q92841 729 aaKnown RBP18.21■□□□□ 0.51
SRCAP-204ENST00000474008 IQGAP3Q86VI3 1631 aa18.2■□□□□ 0.5
SRCAP-204ENST00000474008 METP08581 1390 aa18.2■□□□□ 0.5
SRCAP-204ENST00000474008 ATF3P18847 181 aa18.2■□□□□ 0.5
SRCAP-204ENST00000474008 BRINP3Q76B58 766 aa18.2■□□□□ 0.5
SRCAP-204ENST00000474008 COL16A1Q07092 1604 aaPredicted RBP18.2■□□□□ 0.5
SRCAP-204ENST00000474008 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
SRCAP-204ENST00000474008 NUTM2BA6NNL0 878 aaPredicted RBP18.17■□□□□ 0.5
SRCAP-204ENST00000474008 NUTM2EB1AL46 878 aaPredicted RBP18.17■□□□□ 0.5
SRCAP-204ENST00000474008 CADPS2Q86UW7 1296 aa18.17■□□□□ 0.5
SRCAP-204ENST00000474008 NUTM2AQ8IVF1 878 aaPredicted RBP18.17■□□□□ 0.5
SRCAP-204ENST00000474008 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.17■□□□□ 0.5
SRCAP-204ENST00000474008 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
SRCAP-204ENST00000474008 NRXN3Q9Y4C0 1643 aa18.15■□□□□ 0.5
SRCAP-204ENST00000474008 NCOA3Q9Y6Q9 1424 aa18.15■□□□□ 0.5
SRCAP-204ENST00000474008 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
SRCAP-204ENST00000474008 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
SRCAP-204ENST00000474008 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
SRCAP-204ENST00000474008 TRPM2O94759 1503 aa18.12■□□□□ 0.49
SRCAP-204ENST00000474008 DIP2AQ14689 1571 aa18.1■□□□□ 0.49
SRCAP-204ENST00000474008 MST1RQ04912 1400 aa18.1■□□□□ 0.49
SRCAP-204ENST00000474008 SPATA31A6Q5VVP1 1343 aa18.1■□□□□ 0.49
SRCAP-204ENST00000474008 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
SRCAP-204ENST00000474008 CLTCL1P53675 1640 aa18.08■□□□□ 0.48
SRCAP-204ENST00000474008 SRCAPQ6ZRS2 3230 aa18.08■□□□□ 0.48
SRCAP-204ENST00000474008 NAIPQ13075 1403 aa18.07■□□□□ 0.48
SRCAP-204ENST00000474008 XRN1Q8IZH2 1706 aaKnown RBP18.07■□□□□ 0.48
SRCAP-204ENST00000474008 SETBP1Q9Y6X0 1596 aa18.07■□□□□ 0.48
SRCAP-204ENST00000474008 ASXL1Q8IXJ9 1541 aa18.07■□□□□ 0.48
SRCAP-204ENST00000474008 NEXMIFQ5QGS0 1516 aa18.05■□□□□ 0.48
SRCAP-204ENST00000474008 UPF1Q92900 1129 aaKnown RBP eCLIP18.05■□□□□ 0.48
SRCAP-204ENST00000474008 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
SRCAP-204ENST00000474008 AFF2P51816 1311 aa18.04■□□□□ 0.48
SRCAP-204ENST00000474008 POLA2Q14181 598 aa18.04■□□□□ 0.48
SRCAP-204ENST00000474008 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
SRCAP-204ENST00000474008 ORAI2Q96SN7 254 aa18.04■□□□□ 0.48
SRCAP-204ENST00000474008 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
SRCAP-204ENST00000474008 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms