RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-205ENST00000473883 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
HCLS1-205ENST00000473883 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
HCLS1-205ENST00000473883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.81■□□□□ 0.12
HCLS1-205ENST00000473883 DONSONQ9NYP3 566 aa15.81■□□□□ 0.12
HCLS1-205ENST00000473883 KIF1CO43896 1103 aaKnown RBP15.81■□□□□ 0.12
HCLS1-205ENST00000473883 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
HCLS1-205ENST00000473883 RINLQ6ZS11 566 aa15.81■□□□□ 0.12
HCLS1-205ENST00000473883 BRMS1Q9HCU9 246 aa15.8■□□□□ 0.12
HCLS1-205ENST00000473883 CALCOCO1Q9P1Z2 691 aa15.8■□□□□ 0.12
HCLS1-205ENST00000473883 GABPB1Q06547 395 aaPredicted RBP15.8■□□□□ 0.12
HCLS1-205ENST00000473883 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
HCLS1-205ENST00000473883 GTF2A1P52655 376 aaPredicted RBP15.79■□□□□ 0.12
HCLS1-205ENST00000473883 ZNF513Q8N8E2 541 aaPredicted RBP15.79■□□□□ 0.12
HCLS1-205ENST00000473883 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
HCLS1-205ENST00000473883 SASS6Q6UVJ0 657 aa15.78■□□□□ 0.12
HCLS1-205ENST00000473883 ITFG2Q969R8 447 aa15.78■□□□□ 0.12
HCLS1-205ENST00000473883 GRPEL1Q9HAV7 217 aa15.78■□□□□ 0.12
HCLS1-205ENST00000473883 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
HCLS1-205ENST00000473883 MTA1Q13330 715 aa15.78■□□□□ 0.12
HCLS1-205ENST00000473883 MRVI1Q9Y6F6 885 aa15.77■□□□□ 0.12
HCLS1-205ENST00000473883 NOP2P46087 812 aaKnown RBP15.77■□□□□ 0.11
HCLS1-205ENST00000473883 CSPP1Q1MSJ5 1256 aa15.77■□□□□ 0.11
HCLS1-205ENST00000473883 ANKRD23Q86SG2 305 aa15.77■□□□□ 0.11
HCLS1-205ENST00000473883 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
HCLS1-205ENST00000473883 ATP2B3Q16720 1220 aa15.76■□□□□ 0.11
HCLS1-205ENST00000473883 MSNP26038 577 aaKnown RBP15.76■□□□□ 0.11
HCLS1-205ENST00000473883 SLC4A3P48751 1232 aa15.75■□□□□ 0.11
HCLS1-205ENST00000473883 FEZ2Q9UHY8 353 aaPredicted RBP15.75■□□□□ 0.11
HCLS1-205ENST00000473883 FAM177A1Q8N128 213 aaPredicted RBP15.74■□□□□ 0.11
HCLS1-205ENST00000473883 CFTRP13569 1480 aa15.74■□□□□ 0.11
HCLS1-205ENST00000473883 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
HCLS1-205ENST00000473883 MNS1Q8NEH6 495 aa15.73■□□□□ 0.11
HCLS1-205ENST00000473883 TNNT3P45378 269 aaPredicted RBP15.73■□□□□ 0.11
HCLS1-205ENST00000473883 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
HCLS1-205ENST00000473883 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
HCLS1-205ENST00000473883 HS1BP3Q53T59 392 aa15.72■□□□□ 0.11
HCLS1-205ENST00000473883 PPP1R9BQ96SB3 815 aa15.72■□□□□ 0.11
HCLS1-205ENST00000473883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.72■□□□□ 0.11
HCLS1-205ENST00000473883 RAD50Q92878 1312 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 SETDB1Q15047 1291 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 MED4Q9NPJ6 270 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 DHX57Q6P158 1386 aaKnown RBP15.71■□□□□ 0.11
HCLS1-205ENST00000473883 NRDCO43847 1150 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 TDO2P48775 406 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 CCDC173Q0VFZ6 552 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 ICE2Q659A1 982 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 MKL1Q969V6 931 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 FAM210AQ96ND0 272 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
HCLS1-205ENST00000473883 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.1
HCLS1-205ENST00000473883 GUCY2CP25092 1073 aa15.7■□□□□ 0.1
HCLS1-205ENST00000473883 BECN1Q14457 450 aa15.7■□□□□ 0.1
HCLS1-205ENST00000473883 CALR3Q96L12 384 aaKnown RBP15.7■□□□□ 0.1
HCLS1-205ENST00000473883 TOP2AP11388 1531 aaKnown RBP15.7■□□□□ 0.1
HCLS1-205ENST00000473883 CALRP27797 417 aaKnown RBP15.7■□□□□ 0.1
HCLS1-205ENST00000473883 EXOC8Q8IYI6 725 aa15.7■□□□□ 0.1
HCLS1-205ENST00000473883 NECTIN2Q92692 538 aa15.69■□□□□ 0.1
HCLS1-205ENST00000473883 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
HCLS1-205ENST00000473883 ARMCX6Q7L4S7 300 aa15.69■□□□□ 0.1
HCLS1-205ENST00000473883 CCDC189A1A4V9 331 aa15.68■□□□□ 0.1
HCLS1-205ENST00000473883 TSPAN18Q96SJ8 248 aa15.68■□□□□ 0.1
HCLS1-205ENST00000473883 KDM4AO75164 1064 aa15.68■□□□□ 0.1
HCLS1-205ENST00000473883 DHX16O60231 1041 aaKnown RBP15.67■□□□□ 0.1
HCLS1-205ENST00000473883 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
HCLS1-205ENST00000473883 DNAJC14Q6Y2X3 702 aaPredicted RBP15.67■□□□□ 0.1
HCLS1-205ENST00000473883 FEZ1Q99689 392 aa15.67■□□□□ 0.1
HCLS1-205ENST00000473883 KLHL33A6NCF5 533 aa15.67■□□□□ 0.1
HCLS1-205ENST00000473883 ZC3H12AQ5D1E8 599 aaKnown RBP15.67■□□□□ 0.1
HCLS1-205ENST00000473883 NBPF3Q9H094 633 aa15.67■□□□□ 0.1
HCLS1-205ENST00000473883 ZBTB7CA1YPR0 619 aa15.66■□□□□ 0.1
HCLS1-205ENST00000473883 KIF3CO14782 793 aa15.66■□□□□ 0.1
HCLS1-205ENST00000473883 PPP1R12AO14974 1030 aaPredicted RBP15.66■□□□□ 0.1
HCLS1-205ENST00000473883 MPHOSPH10O00566 681 aaKnown RBP15.65■□□□□ 0.1
HCLS1-205ENST00000473883 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
HCLS1-205ENST00000473883 SLFN14P0C7P3 912 aa15.65■□□□□ 0.1
HCLS1-205ENST00000473883 GTF2F1P35269 517 aaKnown RBP eCLIP15.65■□□□□ 0.1
HCLS1-205ENST00000473883 MYRIPQ8NFW9 859 aa15.65■□□□□ 0.1
HCLS1-205ENST00000473883 IPO8O15397 1037 aaKnown RBP15.64■□□□□ 0.09
HCLS1-205ENST00000473883 ZNF710Q8N1W2 664 aa15.64■□□□□ 0.09
HCLS1-205ENST00000473883 SWT1Q5T5J6 900 aaKnown RBP15.63■□□□□ 0.09
HCLS1-205ENST00000473883 SMG6Q86US8 1419 aaKnown RBP15.63■□□□□ 0.09
HCLS1-205ENST00000473883 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
HCLS1-205ENST00000473883 PAIP2Q9BPZ3 127 aaKnown RBP15.63■□□□□ 0.09
HCLS1-205ENST00000473883 C11orf91Q3C1V1 193 aa15.62■□□□□ 0.09
HCLS1-205ENST00000473883 RSPH14Q9UHP6 348 aa15.62■□□□□ 0.09
HCLS1-205ENST00000473883 IGF1RP08069 1367 aa15.62■□□□□ 0.09
HCLS1-205ENST00000473883 CREBRFQ8IUR6 639 aa15.62■□□□□ 0.09
HCLS1-205ENST00000473883 ARHGEF1Q92888 912 aaKnown RBP15.61■□□□□ 0.09
HCLS1-205ENST00000473883 LRCH2Q5VUJ6 765 aa15.61■□□□□ 0.09
HCLS1-205ENST00000473883 OGFRQ9NZT2 677 aa15.61■□□□□ 0.09
HCLS1-205ENST00000473883 COQ9O75208 318 aa15.6■□□□□ 0.09
HCLS1-205ENST00000473883 MCM5P33992 734 aa15.6■□□□□ 0.09
HCLS1-205ENST00000473883 JMYQ8N9B5 988 aa15.6■□□□□ 0.09
HCLS1-205ENST00000473883 NOL7Q9UMY1 257 aaKnown RBP15.6■□□□□ 0.09
HCLS1-205ENST00000473883 SUFUQ9UMX1 484 aa15.6■□□□□ 0.09
HCLS1-205ENST00000473883 KNSTRNQ9Y448 316 aa15.59■□□□□ 0.09
HCLS1-205ENST00000473883 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
HCLS1-205ENST00000473883 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
HCLS1-205ENST00000473883 MYBPC2Q14324 1141 aa15.58■□□□□ 0.08
HCLS1-205ENST00000473883 CTAGE5O15320 804 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms