RNA–Protein interactions for RNA: ENST00000473146.5

SLC6A20-206, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best)

Gene SLC6A20, Length 2,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-206ENST00000473146 CHGAP10645 457 aaKnown RBP17.78■□□□□ 0.44
SLC6A20-206ENST00000473146 NBPF1Q3BBV0 1214 aa17.77■□□□□ 0.44
SLC6A20-206ENST00000473146 STAC3Q96MF2 364 aa17.77■□□□□ 0.43
SLC6A20-206ENST00000473146 IFT172Q9UG01 1749 aa17.76■□□□□ 0.43
SLC6A20-206ENST00000473146 IDI1Q13907 227 aa17.76■□□□□ 0.43
SLC6A20-206ENST00000473146 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
SLC6A20-206ENST00000473146 IRX6P78412 446 aaPredicted RBP17.74■□□□□ 0.43
SLC6A20-206ENST00000473146 SLC52A1Q9NWF4 448 aa17.74■□□□□ 0.43
SLC6A20-206ENST00000473146 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
SLC6A20-206ENST00000473146 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
SLC6A20-206ENST00000473146 WASHC2AQ641Q2 1341 aa17.74■□□□□ 0.43
SLC6A20-206ENST00000473146 C11orf95C9JLR9 678 aaPredicted RBP17.73■□□□□ 0.43
SLC6A20-206ENST00000473146 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
SLC6A20-206ENST00000473146 MYOM2P54296 1465 aa17.73■□□□□ 0.43
SLC6A20-206ENST00000473146 ZMYM3Q14202 1370 aa17.72■□□□□ 0.43
SLC6A20-206ENST00000473146 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
SLC6A20-206ENST00000473146 PPLO60437 1756 aa17.71■□□□□ 0.43
SLC6A20-206ENST00000473146 SPATA31D1Q6ZQQ2 1576 aa17.71■□□□□ 0.43
SLC6A20-206ENST00000473146 LAMC1P11047 1609 aa17.71■□□□□ 0.43
SLC6A20-206ENST00000473146 MSH5O43196 834 aa17.7■□□□□ 0.42
SLC6A20-206ENST00000473146 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
SLC6A20-206ENST00000473146 MYO5BQ9ULV0 1848 aa17.69■□□□□ 0.42
SLC6A20-206ENST00000473146 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
SLC6A20-206ENST00000473146 TMEM131LA2VDJ0 1609 aa17.69■□□□□ 0.42
SLC6A20-206ENST00000473146 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
SLC6A20-206ENST00000473146 POLR1AO95602 1720 aaPredicted RBP17.68■□□□□ 0.42
SLC6A20-206ENST00000473146 CCDC7Q96M83 1385 aa17.67■□□□□ 0.42
SLC6A20-206ENST00000473146 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
SLC6A20-206ENST00000473146 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
SLC6A20-206ENST00000473146 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
SLC6A20-206ENST00000473146 CFAP70Q5T0N1 1121 aa17.65■□□□□ 0.42
SLC6A20-206ENST00000473146 PIK3C2GO75747 1445 aa17.64■□□□□ 0.41
SLC6A20-206ENST00000473146 NUTM2DQ5VT03 806 aaPredicted RBP17.64■□□□□ 0.41
SLC6A20-206ENST00000473146 FANCIQ9NVI1 1328 aa17.63■□□□□ 0.41
SLC6A20-206ENST00000473146 IQGAP1P46940 1657 aa17.62■□□□□ 0.41
SLC6A20-206ENST00000473146 FER1L4A9Z1Z3 1794 aa17.62■□□□□ 0.41
SLC6A20-206ENST00000473146 VGFO15240 615 aaPredicted RBP17.61■□□□□ 0.41
SLC6A20-206ENST00000473146 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
SLC6A20-206ENST00000473146 CCDC184Q52MB2 194 aa17.6■□□□□ 0.41
SLC6A20-206ENST00000473146 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
SLC6A20-206ENST00000473146 SCAF11Q99590 1463 aaKnown RBP17.6■□□□□ 0.41
SLC6A20-206ENST00000473146 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
SLC6A20-206ENST00000473146 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
SLC6A20-206ENST00000473146 TNRQ92752 1358 aa17.59■□□□□ 0.41
SLC6A20-206ENST00000473146 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
SLC6A20-206ENST00000473146 C3P01024 1663 aa17.59■□□□□ 0.41
SLC6A20-206ENST00000473146 ZFYVE9O95405 1425 aa17.58■□□□□ 0.41
SLC6A20-206ENST00000473146 ERICH6BQ5W0A0 696 aa17.58■□□□□ 0.41
SLC6A20-206ENST00000473146 TESK2Q96S53 571 aa17.58■□□□□ 0.41
SLC6A20-206ENST00000473146 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.41
SLC6A20-206ENST00000473146 FAM9BQ8IZU0 186 aa17.57■□□□□ 0.4
SLC6A20-206ENST00000473146 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
SLC6A20-206ENST00000473146 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
SLC6A20-206ENST00000473146 ADGRB1O14514 1584 aa17.55■□□□□ 0.4
SLC6A20-206ENST00000473146 PRKRIP1Q9H875 184 aaPredicted RBP17.54■□□□□ 0.4
SLC6A20-206ENST00000473146 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
SLC6A20-206ENST00000473146 TMEM132EQ6IEE7 984 aa17.53■□□□□ 0.4
SLC6A20-206ENST00000473146 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
SLC6A20-206ENST00000473146 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
SLC6A20-206ENST00000473146 EIF3AQ14152 1382 aaKnown RBP17.52■□□□□ 0.4
SLC6A20-206ENST00000473146 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.4
SLC6A20-206ENST00000473146 RIMS2Q9UQ26 1411 aa17.52■□□□□ 0.4
SLC6A20-206ENST00000473146 UBR1Q8IWV7 1749 aa17.51■□□□□ 0.39
SLC6A20-206ENST00000473146 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
SLC6A20-206ENST00000473146 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
SLC6A20-206ENST00000473146 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
SLC6A20-206ENST00000473146 TMF1P82094 1093 aa17.49■□□□□ 0.39
SLC6A20-206ENST00000473146 RIMS1Q86UR5 1692 aaKnown RBP17.49■□□□□ 0.39
SLC6A20-206ENST00000473146 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
SLC6A20-206ENST00000473146 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
SLC6A20-206ENST00000473146 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
SLC6A20-206ENST00000473146 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
SLC6A20-206ENST00000473146 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
SLC6A20-206ENST00000473146 ALKQ9UM73 1620 aa17.46■□□□□ 0.39
SLC6A20-206ENST00000473146 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
SLC6A20-206ENST00000473146 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
SLC6A20-206ENST00000473146 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
SLC6A20-206ENST00000473146 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
SLC6A20-206ENST00000473146 NRXN3Q9Y4C0 1643 aa17.42■□□□□ 0.38
SLC6A20-206ENST00000473146 PTPRMP28827 1452 aa17.42■□□□□ 0.38
SLC6A20-206ENST00000473146 SBNO2Q9Y2G9 1366 aa17.42■□□□□ 0.38
SLC6A20-206ENST00000473146 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
SLC6A20-206ENST00000473146 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
SLC6A20-206ENST00000473146 QRICH2Q9H0J4 1663 aa17.41■□□□□ 0.38
SLC6A20-206ENST00000473146 STK26Q9P289 416 aa17.41■□□□□ 0.38
SLC6A20-206ENST00000473146 SLC24A1O60721 1099 aa17.4■□□□□ 0.38
SLC6A20-206ENST00000473146 YTHDC2Q9H6S0 1430 aaKnown RBP17.4■□□□□ 0.38
SLC6A20-206ENST00000473146 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
SLC6A20-206ENST00000473146 LTKP29376 864 aa17.39■□□□□ 0.37
SLC6A20-206ENST00000473146 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
SLC6A20-206ENST00000473146 SLIT1O75093 1534 aa17.37■□□□□ 0.37
SLC6A20-206ENST00000473146 CEP170BQ9Y4F5 1589 aaPredicted RBP17.36■□□□□ 0.37
SLC6A20-206ENST00000473146 ARHGAP23Q9P227 1491 aa17.36■□□□□ 0.37
SLC6A20-206ENST00000473146 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
SLC6A20-206ENST00000473146 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
SLC6A20-206ENST00000473146 METP08581 1390 aa17.35■□□□□ 0.37
SLC6A20-206ENST00000473146 MYOM1P52179 1685 aa17.35■□□□□ 0.37
SLC6A20-206ENST00000473146 PER1O15534 1290 aaPredicted RBP17.35■□□□□ 0.37
SLC6A20-206ENST00000473146 PANK3Q9H999 370 aa17.35■□□□□ 0.37
SLC6A20-206ENST00000473146 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms