RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.45
PCCB-211ENST00000473073 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
PCCB-211ENST00000473073 STAG3Q9UJ98 1225 aa17.83■□□□□ 0.44
PCCB-211ENST00000473073 EIF4G2P78344 907 aaKnown RBP eCLIP17.82■□□□□ 0.44
PCCB-211ENST00000473073 CARD11Q9BXL7 1154 aa17.82■□□□□ 0.44
PCCB-211ENST00000473073 USP47Q96K76 1375 aa17.8■□□□□ 0.44
PCCB-211ENST00000473073 A2ML1A8K2U0 1454 aa17.8■□□□□ 0.44
PCCB-211ENST00000473073 NRXN1Q9ULB1 1477 aa17.78■□□□□ 0.44
PCCB-211ENST00000473073 RPGRIP1LQ68CZ1 1315 aa17.78■□□□□ 0.44
PCCB-211ENST00000473073 CFAP70Q5T0N1 1121 aa17.77■□□□□ 0.44
PCCB-211ENST00000473073 STAC3Q96MF2 364 aa17.77■□□□□ 0.44
PCCB-211ENST00000473073 PIK3C2GO75747 1445 aa17.76■□□□□ 0.43
PCCB-211ENST00000473073 UBR1Q8IWV7 1749 aa17.76■□□□□ 0.43
PCCB-211ENST00000473073 GPRASP1Q5JY77 1395 aa17.76■□□□□ 0.43
PCCB-211ENST00000473073 DIEXFQ68CQ4 756 aaKnown RBP17.75■□□□□ 0.43
PCCB-211ENST00000473073 MYO3AQ8NEV4 1616 aa17.74■□□□□ 0.43
PCCB-211ENST00000473073 VGFO15240 615 aaPredicted RBP17.73■□□□□ 0.43
PCCB-211ENST00000473073 LAMC1P11047 1609 aa17.73■□□□□ 0.43
PCCB-211ENST00000473073 KIAA1210Q9ULL0 1709 aa17.73■□□□□ 0.43
PCCB-211ENST00000473073 NLRP1Q9C000 1473 aa17.73■□□□□ 0.43
PCCB-211ENST00000473073 RIMS2Q9UQ26 1411 aa17.72■□□□□ 0.43
PCCB-211ENST00000473073 ST20-MTHFSA0A0A6YYL1 179 aa17.71■□□□□ 0.43
PCCB-211ENST00000473073 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
PCCB-211ENST00000473073 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
PCCB-211ENST00000473073 KDM5AP29375 1690 aaKnown RBP17.7■□□□□ 0.42
PCCB-211ENST00000473073 IQGAP1P46940 1657 aa17.7■□□□□ 0.42
PCCB-211ENST00000473073 PTPRMP28827 1452 aa17.68■□□□□ 0.42
PCCB-211ENST00000473073 TMEM132EQ6IEE7 984 aa17.68■□□□□ 0.42
PCCB-211ENST00000473073 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
PCCB-211ENST00000473073 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
PCCB-211ENST00000473073 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
PCCB-211ENST00000473073 TMEM2Q9UHN6 1383 aa17.67■□□□□ 0.42
PCCB-211ENST00000473073 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
PCCB-211ENST00000473073 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
PCCB-211ENST00000473073 SCAF11Q99590 1463 aaKnown RBP17.66■□□□□ 0.42
PCCB-211ENST00000473073 SETBP1Q9Y6X0 1596 aa17.65■□□□□ 0.42
PCCB-211ENST00000473073 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
PCCB-211ENST00000473073 ALKQ9UM73 1620 aa17.63■□□□□ 0.41
PCCB-211ENST00000473073 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
PCCB-211ENST00000473073 POLR1AO95602 1720 aaPredicted RBP17.63■□□□□ 0.41
PCCB-211ENST00000473073 LTKP29376 864 aa17.62■□□□□ 0.41
PCCB-211ENST00000473073 POLR3GLQ9BT43 218 aa17.62■□□□□ 0.41
PCCB-211ENST00000473073 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
PCCB-211ENST00000473073 NRXN3Q9Y4C0 1643 aa17.62■□□□□ 0.41
PCCB-211ENST00000473073 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
PCCB-211ENST00000473073 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
PCCB-211ENST00000473073 ZNF142P52746 1687 aaPredicted RBP17.6■□□□□ 0.41
PCCB-211ENST00000473073 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
PCCB-211ENST00000473073 TESK2Q96S53 571 aa17.6■□□□□ 0.41
PCCB-211ENST00000473073 SLIT1O75093 1534 aa17.6■□□□□ 0.41
PCCB-211ENST00000473073 SETD1AO15047 1707 aaKnown RBP17.59■□□□□ 0.41
PCCB-211ENST00000473073 BCANQ96GW7 911 aa17.59■□□□□ 0.41
PCCB-211ENST00000473073 ARHGAP23Q9P227 1491 aa17.59■□□□□ 0.41
PCCB-211ENST00000473073 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
PCCB-211ENST00000473073 STK26Q9P289 416 aa17.59■□□□□ 0.41
PCCB-211ENST00000473073 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.41
PCCB-211ENST00000473073 KDM4FA0A1W2PPD8 638 aa17.58■□□□□ 0.4
PCCB-211ENST00000473073 DISP3Q9P2K9 1392 aa17.58■□□□□ 0.4
PCCB-211ENST00000473073 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
PCCB-211ENST00000473073 ARHGEF28Q8N1W1 1705 aaKnown RBP17.56■□□□□ 0.4
PCCB-211ENST00000473073 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
PCCB-211ENST00000473073 SETD1BQ9UPS6 1966 aaKnown RBP17.56■□□□□ 0.4
PCCB-211ENST00000473073 METP08581 1390 aa17.55■□□□□ 0.4
PCCB-211ENST00000473073 YTHDC2Q9H6S0 1430 aaKnown RBP17.54■□□□□ 0.4
PCCB-211ENST00000473073 PLEKHG1Q9ULL1 1385 aa17.54■□□□□ 0.4
PCCB-211ENST00000473073 MIER1Q8N108 512 aa17.53■□□□□ 0.4
PCCB-211ENST00000473073 QRICH2Q9H0J4 1663 aa17.53■□□□□ 0.4
PCCB-211ENST00000473073 ADAMTS13Q76LX8 1427 aa17.53■□□□□ 0.4
PCCB-211ENST00000473073 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCCB-211ENST00000473073 CENPJQ9HC77 1338 aaPredicted RBP17.52■□□□□ 0.4
PCCB-211ENST00000473073 SLC26A8Q96RN1 970 aa17.52■□□□□ 0.4
PCCB-211ENST00000473073 TMF1P82094 1093 aa17.51■□□□□ 0.39
PCCB-211ENST00000473073 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
PCCB-211ENST00000473073 LRPPRCP42704 1394 aaKnown RBP17.47■□□□□ 0.39
PCCB-211ENST00000473073 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.39
PCCB-211ENST00000473073 MED14O60244 1454 aa17.46■□□□□ 0.39
PCCB-211ENST00000473073 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
PCCB-211ENST00000473073 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
PCCB-211ENST00000473073 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
PCCB-211ENST00000473073 POGKQ9P215 609 aa17.44■□□□□ 0.38
PCCB-211ENST00000473073 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
PCCB-211ENST00000473073 ABCC11Q96J66 1382 aa17.43■□□□□ 0.38
PCCB-211ENST00000473073 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
PCCB-211ENST00000473073 DLC1Q96QB1 1528 aa17.43■□□□□ 0.38
PCCB-211ENST00000473073 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
PCCB-211ENST00000473073 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
PCCB-211ENST00000473073 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
PCCB-211ENST00000473073 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
PCCB-211ENST00000473073 HSPA2P54652 639 aa17.42■□□□□ 0.38
PCCB-211ENST00000473073 MYOM1P52179 1685 aa17.42■□□□□ 0.38
PCCB-211ENST00000473073 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
PCCB-211ENST00000473073 CPS1P31327 1500 aa17.41■□□□□ 0.38
PCCB-211ENST00000473073 TBX22Q9Y458 520 aa17.4■□□□□ 0.38
PCCB-211ENST00000473073 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
PCCB-211ENST00000473073 TECPR2O15040 1411 aa17.39■□□□□ 0.37
PCCB-211ENST00000473073 NPHP4O75161 1426 aaPredicted RBP17.39■□□□□ 0.37
PCCB-211ENST00000473073 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
PCCB-211ENST00000473073 ANP32CO43423 234 aa17.39■□□□□ 0.37
PCCB-211ENST00000473073 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
PCCB-211ENST00000473073 EVC2Q86UK5 1308 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms