RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 ANKRD13DQ6ZTN6 518 aa7.19□□□□□ -1.26
CLCC1-208ENST00000473062 ANKK1Q8NFD2 765 aa7.19□□□□□ -1.26
CLCC1-208ENST00000473062 TMUB1Q9BVT8 246 aa7.19□□□□□ -1.26
CLCC1-208ENST00000473062 PRR14Q9BWN1 585 aa7.19□□□□□ -1.26
CLCC1-208ENST00000473062 GPBP1L1Q9HC44 474 aaPredicted RBP7.19□□□□□ -1.26
CLCC1-208ENST00000473062 FAM217BQ9NTX9 383 aaPredicted RBP7.19□□□□□ -1.26
CLCC1-208ENST00000473062 SSTR3P32745 418 aaPredicted RBP7.18□□□□□ -1.26
CLCC1-208ENST00000473062 POTEEQ6S8J3 1075 aa7.18□□□□□ -1.26
CLCC1-208ENST00000473062 LRCH3Q96II8 777 aa7.18□□□□□ -1.26
CLCC1-208ENST00000473062 GOPCQ9HD26 462 aa7.18□□□□□ -1.26
CLCC1-208ENST00000473062 ERICH6Q7L0X2 663 aa7.17□□□□□ -1.26
CLCC1-208ENST00000473062 PHOX2BQ99453 314 aa7.17□□□□□ -1.26
CLCC1-208ENST00000473062 SEPT9Q9UHD8 586 aaPredicted RBP7.17□□□□□ -1.26
CLCC1-208ENST00000473062 BHMG1C9JSJ3 638 aaPredicted RBP7.16□□□□□ -1.26
CLCC1-208ENST00000473062 USP46P62068 366 aa7.16□□□□□ -1.26
CLCC1-208ENST00000473062 RDH13Q8NBN7 331 aa7.16□□□□□ -1.26
CLCC1-208ENST00000473062 POTEB3A0JP26 581 aa7.15□□□□□ -1.26
CLCC1-208ENST00000473062 DDX11L8A8MPP1 907 aa7.15□□□□□ -1.26
CLCC1-208ENST00000473062 SMAPO00193 183 aa7.15□□□□□ -1.26
CLCC1-208ENST00000473062 GRIPAP1Q4V328 841 aa7.15□□□□□ -1.26
CLCC1-208ENST00000473062 POTEBQ6S5H4 581 aa7.15□□□□□ -1.26
CLCC1-208ENST00000473062 NUTM1Q86Y26 1132 aa7.15□□□□□ -1.26
CLCC1-208ENST00000473062 ZFRQ96KR1 1074 aaKnown RBP7.15□□□□□ -1.26
CLCC1-208ENST00000473062 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.15□□□□□ -1.26
CLCC1-208ENST00000473062 KMT5BQ4FZB7 885 aa7.14□□□□□ -1.27
CLCC1-208ENST00000473062 BEGAINQ9BUH8 593 aa7.14□□□□□ -1.27
CLCC1-208ENST00000473062 HRO43593 1189 aa7.13□□□□□ -1.27
CLCC1-208ENST00000473062 RNF40O75150 1001 aa7.13□□□□□ -1.27
CLCC1-208ENST00000473062 SWT1Q5T5J6 900 aaKnown RBP7.13□□□□□ -1.27
CLCC1-208ENST00000473062 IL27Q8NEV9 243 aa7.13□□□□□ -1.27
CLCC1-208ENST00000473062 PCMTD1Q96MG8 357 aaPredicted RBP7.13□□□□□ -1.27
CLCC1-208ENST00000473062 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
CLCC1-208ENST00000473062 MS4A1P11836 297 aa7.12□□□□□ -1.27
CLCC1-208ENST00000473062 CD46P15529 392 aa7.12□□□□□ -1.27
CLCC1-208ENST00000473062 SH3D19Q5HYK7 790 aa7.12□□□□□ -1.27
CLCC1-208ENST00000473062 NYAP1Q6ZVC0 841 aa7.12□□□□□ -1.27
CLCC1-208ENST00000473062 SAMD7Q7Z3H4 446 aa7.12□□□□□ -1.27
CLCC1-208ENST00000473062 GJA5P36382 358 aa7.11□□□□□ -1.27
CLCC1-208ENST00000473062 WNT2BQ93097 391 aa7.11□□□□□ -1.27
CLCC1-208ENST00000473062 SOWAHBA6NEL2 793 aa7.1□□□□□ -1.27
CLCC1-208ENST00000473062 NLRP7Q8WX94 980 aa7.1□□□□□ -1.27
CLCC1-208ENST00000473062 REPIN1Q9BWE0 567 aaKnown RBP7.1□□□□□ -1.27
CLCC1-208ENST00000473062 ATP1B4Q9UN42 357 aaPredicted RBP7.1□□□□□ -1.27
CLCC1-208ENST00000473062 KDM4AO75164 1064 aa7.09□□□□□ -1.27
CLCC1-208ENST00000473062 PPP4CP60510 307 aa7.09□□□□□ -1.27
CLCC1-208ENST00000473062 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
CLCC1-208ENST00000473062 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
CLCC1-208ENST00000473062 TSR3Q9UJK0 312 aaKnown RBP7.09□□□□□ -1.27
CLCC1-208ENST00000473062 C3orf80F5H4A9 247 aa7.08□□□□□ -1.28
CLCC1-208ENST00000473062 CFHP08603 1231 aa7.08□□□□□ -1.28
CLCC1-208ENST00000473062 GCGRP47871 477 aa7.08□□□□□ -1.28
CLCC1-208ENST00000473062 SKIV2LQ15477 1246 aaKnown RBP7.08□□□□□ -1.28
CLCC1-208ENST00000473062 TBC1D2Q9BYX2 928 aa7.08□□□□□ -1.28
CLCC1-208ENST00000473062 PLEKHG3A1L390 1219 aa7.07□□□□□ -1.28
CLCC1-208ENST00000473062 CLK2P49760 499 aaKnown RBP7.06□□□□□ -1.28
CLCC1-208ENST00000473062 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
CLCC1-208ENST00000473062 HPS5Q9UPZ3 1129 aa7.06□□□□□ -1.28
CLCC1-208ENST00000473062 Q3C1V9 767 aa7.05□□□□□ -1.28
CLCC1-208ENST00000473062 ATP6V1AP38606 617 aa7.04□□□□□ -1.28
CLCC1-208ENST00000473062 MYSM1Q5VVJ2 828 aa7.04□□□□□ -1.28
CLCC1-208ENST00000473062 THSD4Q6ZMP0 1018 aa7.04□□□□□ -1.28
CLCC1-208ENST00000473062 SPIRE2Q8WWL2 714 aa7.04□□□□□ -1.28
CLCC1-208ENST00000473062 MYT1LQ9UL68 1186 aa7.04□□□□□ -1.28
CLCC1-208ENST00000473062 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
CLCC1-208ENST00000473062 SPTLC1O15269 473 aa7.03□□□□□ -1.28
CLCC1-208ENST00000473062 ACTN4O43707 911 aaKnown RBP7.03□□□□□ -1.28
CLCC1-208ENST00000473062 SLC10A3P09131 477 aa7.03□□□□□ -1.28
CLCC1-208ENST00000473062 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
CLCC1-208ENST00000473062 RIC3Q7Z5B4 369 aa7.03□□□□□ -1.28
CLCC1-208ENST00000473062 KCTD12Q96CX2 325 aaKnown RBP7.03□□□□□ -1.28
CLCC1-208ENST00000473062 GTF3C3Q9Y5Q9 886 aa7.03□□□□□ -1.28
CLCC1-208ENST00000473062 APBB1O00213 710 aa7.02□□□□□ -1.29
CLCC1-208ENST00000473062 HOXA2O43364 376 aa7.02□□□□□ -1.29
CLCC1-208ENST00000473062 NR1I2O75469 434 aa7.02□□□□□ -1.29
CLCC1-208ENST00000473062 BCAMP50895 628 aa7.01□□□□□ -1.29
CLCC1-208ENST00000473062 RSBN1LQ6PCB5 846 aaPredicted RBP7.01□□□□□ -1.29
CLCC1-208ENST00000473062 ZBTB3Q9H5J0 574 aa7.01□□□□□ -1.29
CLCC1-208ENST00000473062 FDX1P10109 184 aa7□□□□□ -1.29
CLCC1-208ENST00000473062 FUT2Q10981 343 aa7□□□□□ -1.29
CLCC1-208ENST00000473062 FLIIQ13045 1269 aa7□□□□□ -1.29
CLCC1-208ENST00000473062 POLR3EQ9NVU0 708 aa7□□□□□ -1.29
CLCC1-208ENST00000473062 PCDHB3Q9Y5E6 796 aa7□□□□□ -1.29
CLCC1-208ENST00000473062 TMEM259Q4ZIN3 620 aa6.99□□□□□ -1.29
CLCC1-208ENST00000473062 HCSTQ9UBK5 93 aa6.99□□□□□ -1.29
CLCC1-208ENST00000473062 MOXD2PA6NHM9 499 aa6.98□□□□□ -1.29
CLCC1-208ENST00000473062 NUTM2BA6NNL0 878 aaPredicted RBP6.98□□□□□ -1.29
CLCC1-208ENST00000473062 NUTM2EB1AL46 878 aaPredicted RBP6.98□□□□□ -1.29
CLCC1-208ENST00000473062 NUTM2DQ5VT03 806 aaPredicted RBP6.98□□□□□ -1.29
CLCC1-208ENST00000473062 NUTM2AQ8IVF1 878 aaPredicted RBP6.98□□□□□ -1.29
CLCC1-208ENST00000473062 SALL2Q9Y467 1007 aaPredicted RBP6.98□□□□□ -1.29
CLCC1-208ENST00000473062 MTMR2Q13614 643 aa6.97□□□□□ -1.29
CLCC1-208ENST00000473062 HELBQ8NG08 1087 aaPredicted RBP6.97□□□□□ -1.29
CLCC1-208ENST00000473062 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
CLCC1-208ENST00000473062 PRM3Q9NNZ6 103 aa6.97□□□□□ -1.29
CLCC1-208ENST00000473062 WBP1LQ9NX94 342 aa6.97□□□□□ -1.29
CLCC1-208ENST00000473062 FMNL1O95466 1100 aaPredicted RBP6.96□□□□□ -1.3
CLCC1-208ENST00000473062 MORN1Q5T089 497 aa6.96□□□□□ -1.3
CLCC1-208ENST00000473062 PPP2R2DQ66LE6 453 aa6.96□□□□□ -1.3
CLCC1-208ENST00000473062 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.96□□□□□ -1.3
CLCC1-208ENST00000473062 C6orf229H3BNL8 230 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms