RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 SWT1Q5T5J6 900 aaKnown RBP12.41□□□□□ -0.42
RFXAP-202ENST00000472888 COPS2P61201 443 aa12.4□□□□□ -0.42
RFXAP-202ENST00000472888 HIC1Q14526 733 aa12.39□□□□□ -0.43
RFXAP-202ENST00000472888 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
RFXAP-202ENST00000472888 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
RFXAP-202ENST00000472888 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
RFXAP-202ENST00000472888 TRIM67Q6ZTA4 783 aa12.38□□□□□ -0.43
RFXAP-202ENST00000472888 HDGFP51858 240 aaKnown RBP12.37□□□□□ -0.43
RFXAP-202ENST00000472888 ZNF787Q6DD87 383 aa12.37□□□□□ -0.43
RFXAP-202ENST00000472888 ZPR1O75312 459 aa12.35□□□□□ -0.43
RFXAP-202ENST00000472888 EYA1Q99502 592 aa12.35□□□□□ -0.43
RFXAP-202ENST00000472888 TMUB1Q9BVT8 246 aa12.35□□□□□ -0.43
RFXAP-202ENST00000472888 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
RFXAP-202ENST00000472888 GNPATO15228 680 aa12.33□□□□□ -0.44
RFXAP-202ENST00000472888 GGCXP38435 758 aa12.32□□□□□ -0.44
RFXAP-202ENST00000472888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
RFXAP-202ENST00000472888 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
RFXAP-202ENST00000472888 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
RFXAP-202ENST00000472888 ZNF775Q96BV0 537 aaPredicted RBP12.32□□□□□ -0.44
RFXAP-202ENST00000472888 SLC4A3P48751 1232 aa12.3□□□□□ -0.44
RFXAP-202ENST00000472888 BCANQ96GW7 911 aa12.3□□□□□ -0.44
RFXAP-202ENST00000472888 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
RFXAP-202ENST00000472888 OATP04181 439 aa12.29□□□□□ -0.44
RFXAP-202ENST00000472888 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
RFXAP-202ENST00000472888 BLOC1S3Q6QNY0 202 aa12.27□□□□□ -0.45
RFXAP-202ENST00000472888 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
RFXAP-202ENST00000472888 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
RFXAP-202ENST00000472888 TLL1O43897 1013 aa12.25□□□□□ -0.45
RFXAP-202ENST00000472888 SLC19A1P41440 591 aa12.25□□□□□ -0.45
RFXAP-202ENST00000472888 GPR37O15354 613 aa12.24□□□□□ -0.45
RFXAP-202ENST00000472888 MYT1Q01538 1121 aa12.23□□□□□ -0.45
RFXAP-202ENST00000472888 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
RFXAP-202ENST00000472888 DNAJB2P25686 324 aa12.22□□□□□ -0.45
RFXAP-202ENST00000472888 POTECB2RU33 542 aa12.21□□□□□ -0.45
RFXAP-202ENST00000472888 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
RFXAP-202ENST00000472888 FECHP22830 423 aa12.2□□□□□ -0.46
RFXAP-202ENST00000472888 PRR20EP86478 221 aa12.2□□□□□ -0.46
RFXAP-202ENST00000472888 PRR20CP86479 221 aa12.2□□□□□ -0.46
RFXAP-202ENST00000472888 PRR20DP86480 221 aa12.2□□□□□ -0.46
RFXAP-202ENST00000472888 PRR20BP86481 221 aa12.2□□□□□ -0.46
RFXAP-202ENST00000472888 PRR20AP86496 221 aa12.2□□□□□ -0.46
RFXAP-202ENST00000472888 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
RFXAP-202ENST00000472888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
RFXAP-202ENST00000472888 PPEF1O14829 653 aaPredicted RBP12.19□□□□□ -0.46
RFXAP-202ENST00000472888 LIAT1Q6ZQX7 453 aa12.19□□□□□ -0.46
RFXAP-202ENST00000472888 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
RFXAP-202ENST00000472888 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
RFXAP-202ENST00000472888 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
RFXAP-202ENST00000472888 DGAT1O75907 488 aa12.17□□□□□ -0.46
RFXAP-202ENST00000472888 S1PR4O95977 384 aa12.17□□□□□ -0.46
RFXAP-202ENST00000472888 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
RFXAP-202ENST00000472888 METTL3Q86U44 580 aaKnown RBP12.17□□□□□ -0.46
RFXAP-202ENST00000472888 PXYLP1Q8TE99 480 aa12.17□□□□□ -0.46
RFXAP-202ENST00000472888 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
RFXAP-202ENST00000472888 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
RFXAP-202ENST00000472888 KRI1Q8N9T8 703 aaKnown RBP12.16□□□□□ -0.46
RFXAP-202ENST00000472888 ACTN4O43707 911 aaKnown RBP12.15□□□□□ -0.46
RFXAP-202ENST00000472888 GDF9O60383 454 aa12.15□□□□□ -0.46
RFXAP-202ENST00000472888 PKDCCQ504Y2 493 aa12.15□□□□□ -0.46
RFXAP-202ENST00000472888 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
RFXAP-202ENST00000472888 IRF6O14896 467 aa12.13□□□□□ -0.47
RFXAP-202ENST00000472888 PLA2G2CQ5R387 149 aa12.12□□□□□ -0.47
RFXAP-202ENST00000472888 ZNF697Q5TEC3 545 aa12.12□□□□□ -0.47
RFXAP-202ENST00000472888 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
RFXAP-202ENST00000472888 TNFRSF10AO00220 468 aa12.1□□□□□ -0.47
RFXAP-202ENST00000472888 CFHP08603 1231 aa12.1□□□□□ -0.47
RFXAP-202ENST00000472888 SLC10A3P09131 477 aa12.1□□□□□ -0.47
RFXAP-202ENST00000472888 ZMYND10O75800 440 aa12.09□□□□□ -0.47
RFXAP-202ENST00000472888 LCE2AQ5TA79 106 aaPredicted RBP12.09□□□□□ -0.47
RFXAP-202ENST00000472888 ADH1BP00325 375 aa12.08□□□□□ -0.48
RFXAP-202ENST00000472888 BARGINQ6ZT62 677 aa12.08□□□□□ -0.48
RFXAP-202ENST00000472888 FAM187AA6NFU0 413 aa12.07□□□□□ -0.48
RFXAP-202ENST00000472888 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
RFXAP-202ENST00000472888 DAXXQ9UER7 740 aaPredicted RBP12.07□□□□□ -0.48
RFXAP-202ENST00000472888 ST8SIA5O15466 376 aa12.06□□□□□ -0.48
RFXAP-202ENST00000472888 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
RFXAP-202ENST00000472888 CCDC102AQ96A19 550 aa12.05□□□□□ -0.48
RFXAP-202ENST00000472888 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
RFXAP-202ENST00000472888 PKD2L1Q9P0L9 805 aa12.03□□□□□ -0.48
RFXAP-202ENST00000472888 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
RFXAP-202ENST00000472888 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
RFXAP-202ENST00000472888 NR1I2O75469 434 aa12□□□□□ -0.49
RFXAP-202ENST00000472888 RDH13Q8NBN7 331 aa12□□□□□ -0.49
RFXAP-202ENST00000472888 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
RFXAP-202ENST00000472888 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
RFXAP-202ENST00000472888 SCUBE3Q8IX30 993 aa11.99□□□□□ -0.49
RFXAP-202ENST00000472888 CLCN1P35523 988 aa11.98□□□□□ -0.49
RFXAP-202ENST00000472888 NLRP7Q8WX94 980 aa11.98□□□□□ -0.49
RFXAP-202ENST00000472888 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
RFXAP-202ENST00000472888 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
RFXAP-202ENST00000472888 AK7Q96M32 723 aa11.96□□□□□ -0.49
RFXAP-202ENST00000472888 DACH1Q9UI36 760 aa11.96□□□□□ -0.49
RFXAP-202ENST00000472888 CRIPAKQ8N1N5 446 aa11.95□□□□□ -0.5
RFXAP-202ENST00000472888 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
RFXAP-202ENST00000472888 FOXC1Q12948 553 aa11.92□□□□□ -0.5
RFXAP-202ENST00000472888 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
RFXAP-202ENST00000472888 SPSB2Q99619 263 aa11.92□□□□□ -0.5
RFXAP-202ENST00000472888 TOR4AQ9NXH8 423 aa11.92□□□□□ -0.5
RFXAP-202ENST00000472888 AVPP01185 164 aa11.91□□□□□ -0.5
RFXAP-202ENST00000472888 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms