RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
HIF3A-206ENST00000472815 IDI1Q13907 227 aa20.41■□□□□ 0.86
HIF3A-206ENST00000472815 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
HIF3A-206ENST00000472815 KDM4FA0A1W2PPD8 638 aa20.4■□□□□ 0.86
HIF3A-206ENST00000472815 TMEM131LA2VDJ0 1609 aa20.4■□□□□ 0.86
HIF3A-206ENST00000472815 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.85
HIF3A-206ENST00000472815 PTPRMP28827 1452 aa20.39■□□□□ 0.85
HIF3A-206ENST00000472815 VGFO15240 615 aaPredicted RBP20.38■□□□□ 0.85
HIF3A-206ENST00000472815 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
HIF3A-206ENST00000472815 NBPF1Q3BBV0 1214 aa20.37■□□□□ 0.85
HIF3A-206ENST00000472815 STAG3Q9UJ98 1225 aa20.37■□□□□ 0.85
HIF3A-206ENST00000472815 WASHC2AQ641Q2 1341 aa20.37■□□□□ 0.85
HIF3A-206ENST00000472815 CCDC7Q96M83 1385 aa20.37■□□□□ 0.85
HIF3A-206ENST00000472815 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
HIF3A-206ENST00000472815 MYO5BQ9ULV0 1848 aa20.36■□□□□ 0.85
HIF3A-206ENST00000472815 IQGAP1P46940 1657 aa20.35■□□□□ 0.85
HIF3A-206ENST00000472815 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
HIF3A-206ENST00000472815 EIF3AQ14152 1382 aaKnown RBP20.35■□□□□ 0.85
HIF3A-206ENST00000472815 ADGRF5Q8IZF2 1346 aa20.34■□□□□ 0.85
HIF3A-206ENST00000472815 SETBP1Q9Y6X0 1596 aa20.34■□□□□ 0.85
HIF3A-206ENST00000472815 SCAF11Q99590 1463 aaKnown RBP20.34■□□□□ 0.85
HIF3A-206ENST00000472815 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
HIF3A-206ENST00000472815 ST20-MTHFSA0A0A6YYL1 179 aa20.33■□□□□ 0.85
HIF3A-206ENST00000472815 KDM5AP29375 1690 aaKnown RBP20.33■□□□□ 0.84
HIF3A-206ENST00000472815 CEBPAP49715 358 aaPredicted RBP20.33■□□□□ 0.84
HIF3A-206ENST00000472815 MIER1Q8N108 512 aa20.33■□□□□ 0.84
HIF3A-206ENST00000472815 TNRQ92752 1358 aa20.31■□□□□ 0.84
HIF3A-206ENST00000472815 KIF7Q2M1P5 1343 aa20.31■□□□□ 0.84
HIF3A-206ENST00000472815 SLC24A1O60721 1099 aa20.3■□□□□ 0.84
HIF3A-206ENST00000472815 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
HIF3A-206ENST00000472815 CFAP70Q5T0N1 1121 aa20.27■□□□□ 0.84
HIF3A-206ENST00000472815 A2ML1A8K2U0 1454 aa20.27■□□□□ 0.84
HIF3A-206ENST00000472815 NLRP1Q9C000 1473 aa20.27■□□□□ 0.84
HIF3A-206ENST00000472815 C11orf95C9JLR9 678 aaPredicted RBP20.27■□□□□ 0.83
HIF3A-206ENST00000472815 ANP32CO43423 234 aa20.27■□□□□ 0.83
HIF3A-206ENST00000472815 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.83
HIF3A-206ENST00000472815 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
HIF3A-206ENST00000472815 MYO3AQ8NEV4 1616 aa20.25■□□□□ 0.83
HIF3A-206ENST00000472815 TMF1P82094 1093 aa20.24■□□□□ 0.83
HIF3A-206ENST00000472815 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
HIF3A-206ENST00000472815 RIMS2Q9UQ26 1411 aa20.22■□□□□ 0.83
HIF3A-206ENST00000472815 CDCA8Q53HL2 280 aa20.22■□□□□ 0.83
HIF3A-206ENST00000472815 ZNF142P52746 1687 aaPredicted RBP20.21■□□□□ 0.83
HIF3A-206ENST00000472815 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
HIF3A-206ENST00000472815 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
HIF3A-206ENST00000472815 TESK2Q96S53 571 aa20.2■□□□□ 0.82
HIF3A-206ENST00000472815 ADGRB1O14514 1584 aa20.2■□□□□ 0.82
HIF3A-206ENST00000472815 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
HIF3A-206ENST00000472815 CEP170BQ9Y4F5 1589 aaPredicted RBP20.18■□□□□ 0.82
HIF3A-206ENST00000472815 SBNO2Q9Y2G9 1366 aa20.16■□□□□ 0.82
HIF3A-206ENST00000472815 ALKQ9UM73 1620 aa20.14■□□□□ 0.81
HIF3A-206ENST00000472815 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
HIF3A-206ENST00000472815 CENPJQ9HC77 1338 aaPredicted RBP20.14■□□□□ 0.81
HIF3A-206ENST00000472815 DISP3Q9P2K9 1392 aa20.13■□□□□ 0.81
HIF3A-206ENST00000472815 CCER2I3L3R5 266 aa20.13■□□□□ 0.81
HIF3A-206ENST00000472815 ARHGEF28Q8N1W1 1705 aaKnown RBP20.12■□□□□ 0.81
HIF3A-206ENST00000472815 QRICH2Q9H0J4 1663 aa20.11■□□□□ 0.81
HIF3A-206ENST00000472815 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
HIF3A-206ENST00000472815 TMEM132EQ6IEE7 984 aa20.1■□□□□ 0.81
HIF3A-206ENST00000472815 THEMISQ8N1K5 641 aaPredicted RBP20.09■□□□□ 0.81
HIF3A-206ENST00000472815 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
HIF3A-206ENST00000472815 SLIT1O75093 1534 aa20.07■□□□□ 0.8
HIF3A-206ENST00000472815 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
HIF3A-206ENST00000472815 YTHDC2Q9H6S0 1430 aaKnown RBP20.07■□□□□ 0.8
HIF3A-206ENST00000472815 LMTK3Q96Q04 1460 aa20.06■□□□□ 0.8
HIF3A-206ENST00000472815 SETD1AO15047 1707 aaKnown RBP20.06■□□□□ 0.8
HIF3A-206ENST00000472815 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
HIF3A-206ENST00000472815 ARHGAP23Q9P227 1491 aa20.04■□□□□ 0.8
HIF3A-206ENST00000472815 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
HIF3A-206ENST00000472815 KTN1Q86UP2 1357 aaKnown RBP20.03■□□□□ 0.8
HIF3A-206ENST00000472815 PLEKHG1Q9ULL1 1385 aa20.03■□□□□ 0.8
HIF3A-206ENST00000472815 BCANQ96GW7 911 aa20.03■□□□□ 0.8
HIF3A-206ENST00000472815 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
HIF3A-206ENST00000472815 DLC1Q96QB1 1528 aa20.03■□□□□ 0.8
HIF3A-206ENST00000472815 CENPBP07199 599 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-206ENST00000472815 TXNDC2Q86VQ3 553 aa20.01■□□□□ 0.79
HIF3A-206ENST00000472815 LRPPRCP42704 1394 aaKnown RBP20.01■□□□□ 0.79
HIF3A-206ENST00000472815 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
HIF3A-206ENST00000472815 STK26Q9P289 416 aa20■□□□□ 0.79
HIF3A-206ENST00000472815 EVC2Q86UK5 1308 aa20■□□□□ 0.79
HIF3A-206ENST00000472815 POGKQ9P215 609 aa19.99■□□□□ 0.79
HIF3A-206ENST00000472815 KNDC1Q76NI1 1749 aa19.99■□□□□ 0.79
HIF3A-206ENST00000472815 ABCC11Q96J66 1382 aa19.99■□□□□ 0.79
HIF3A-206ENST00000472815 MYOM1P52179 1685 aa19.98■□□□□ 0.79
HIF3A-206ENST00000472815 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
HIF3A-206ENST00000472815 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
HIF3A-206ENST00000472815 YTHDC1Q96MU7 727 aaKnown RBP19.96■□□□□ 0.79
HIF3A-206ENST00000472815 PANK3Q9H999 370 aa19.96■□□□□ 0.79
HIF3A-206ENST00000472815 LTKP29376 864 aa19.95■□□□□ 0.78
HIF3A-206ENST00000472815 RALBP1Q15311 655 aa19.95■□□□□ 0.78
HIF3A-206ENST00000472815 HSPA2P54652 639 aa19.94■□□□□ 0.78
HIF3A-206ENST00000472815 ANKLE2Q86XL3 938 aa19.94■□□□□ 0.78
HIF3A-206ENST00000472815 PRAM1Q96QH2 718 aa19.94■□□□□ 0.78
HIF3A-206ENST00000472815 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
HIF3A-206ENST00000472815 TECPR2O15040 1411 aa19.93■□□□□ 0.78
HIF3A-206ENST00000472815 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
HIF3A-206ENST00000472815 STRCQ7RTU9 1775 aa19.93■□□□□ 0.78
HIF3A-206ENST00000472815 KNSTRNQ9Y448 316 aa19.93■□□□□ 0.78
HIF3A-206ENST00000472815 METP08581 1390 aa19.92■□□□□ 0.78
HIF3A-206ENST00000472815 CPS1P31327 1500 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms