RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 PPP1R15AO75807 674 aaPredicted RBP8.39□□□□□ -1.07
EPHA4-212ENST00000472696 ZNF142P52746 1687 aaPredicted RBP8.39□□□□□ -1.07
EPHA4-212ENST00000472696 UGGT1Q9NYU2 1555 aa8.39□□□□□ -1.07
EPHA4-212ENST00000472696 MYOM2P54296 1465 aa8.38□□□□□ -1.07
EPHA4-212ENST00000472696 UHRF1BP1Q6BDS2 1440 aa8.38□□□□□ -1.07
EPHA4-212ENST00000472696 UBR1Q8IWV7 1749 aa8.38□□□□□ -1.07
EPHA4-212ENST00000472696 CEBPAP49715 358 aaPredicted RBP8.38□□□□□ -1.07
EPHA4-212ENST00000472696 L3MBTL2Q969R5 705 aa8.38□□□□□ -1.07
EPHA4-212ENST00000472696 MYO3AQ8NEV4 1616 aa8.38□□□□□ -1.07
EPHA4-212ENST00000472696 CEP170BQ9Y4F5 1589 aaPredicted RBP8.37□□□□□ -1.07
EPHA4-212ENST00000472696 SLIT1O75093 1534 aa8.37□□□□□ -1.07
EPHA4-212ENST00000472696 IFT172Q9UG01 1749 aa8.37□□□□□ -1.07
EPHA4-212ENST00000472696 PPLO60437 1756 aa8.36□□□□□ -1.07
EPHA4-212ENST00000472696 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
EPHA4-212ENST00000472696 RGL3Q3MIN7 710 aa8.36□□□□□ -1.07
EPHA4-212ENST00000472696 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
EPHA4-212ENST00000472696 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
EPHA4-212ENST00000472696 EID1Q9Y6B2 187 aa8.36□□□□□ -1.07
EPHA4-212ENST00000472696 KIAA1210Q9ULL0 1709 aa8.36□□□□□ -1.07
EPHA4-212ENST00000472696 ARHGAP23Q9P227 1491 aa8.36□□□□□ -1.07
EPHA4-212ENST00000472696 NRXN1Q9ULB1 1477 aa8.36□□□□□ -1.07
EPHA4-212ENST00000472696 TMEM2Q9UHN6 1383 aa8.35□□□□□ -1.07
EPHA4-212ENST00000472696 NEXMIFQ5QGS0 1516 aa8.35□□□□□ -1.07
EPHA4-212ENST00000472696 LAMC1P11047 1609 aa8.34□□□□□ -1.07
EPHA4-212ENST00000472696 MYO5BQ9ULV0 1848 aa8.33□□□□□ -1.08
EPHA4-212ENST00000472696 ANKLE2Q86XL3 938 aa8.33□□□□□ -1.08
EPHA4-212ENST00000472696 PRAG1Q86YV5 1406 aa8.33□□□□□ -1.08
EPHA4-212ENST00000472696 RIMS2Q9UQ26 1411 aa8.33□□□□□ -1.08
EPHA4-212ENST00000472696 PIK3C2GO75747 1445 aa8.32□□□□□ -1.08
EPHA4-212ENST00000472696 PLEKHG1Q9ULL1 1385 aa8.32□□□□□ -1.08
EPHA4-212ENST00000472696 RALGAPBQ86X10 1494 aa8.32□□□□□ -1.08
EPHA4-212ENST00000472696 SETBP1Q9Y6X0 1596 aa8.31□□□□□ -1.08
EPHA4-212ENST00000472696 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
EPHA4-212ENST00000472696 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
EPHA4-212ENST00000472696 GPRASP1Q5JY77 1395 aa8.31□□□□□ -1.08
EPHA4-212ENST00000472696 MED14O60244 1454 aa8.31□□□□□ -1.08
EPHA4-212ENST00000472696 SCAF11Q99590 1463 aaKnown RBP8.31□□□□□ -1.08
EPHA4-212ENST00000472696 DIP2AQ14689 1571 aa8.31□□□□□ -1.08
EPHA4-212ENST00000472696 KDM2AQ9Y2K7 1162 aa8.3□□□□□ -1.08
EPHA4-212ENST00000472696 PIK3R4Q99570 1358 aa8.3□□□□□ -1.08
EPHA4-212ENST00000472696 TRPM1Q7Z4N2 1603 aa8.29□□□□□ -1.08
EPHA4-212ENST00000472696 PELP1Q8IZL8 1130 aaKnown RBP8.29□□□□□ -1.08
EPHA4-212ENST00000472696 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
EPHA4-212ENST00000472696 TBX22Q9Y458 520 aa8.29□□□□□ -1.08
EPHA4-212ENST00000472696 DMRT2Q9Y5R5 561 aa8.29□□□□□ -1.08
EPHA4-212ENST00000472696 POLR1AO95602 1720 aaPredicted RBP8.29□□□□□ -1.08
EPHA4-212ENST00000472696 ADGRF5Q8IZF2 1346 aa8.29□□□□□ -1.08
EPHA4-212ENST00000472696 LMTK3Q96Q04 1460 aa8.28□□□□□ -1.08
EPHA4-212ENST00000472696 ROCK2O75116 1388 aaKnown RBP8.28□□□□□ -1.08
EPHA4-212ENST00000472696 NBPF8Q3BBV2 869 aa8.28□□□□□ -1.08
EPHA4-212ENST00000472696 SIRT1Q96EB6 747 aa8.28□□□□□ -1.08
EPHA4-212ENST00000472696 BCANQ96GW7 911 aa8.28□□□□□ -1.08
EPHA4-212ENST00000472696 EIF3AQ14152 1382 aaKnown RBP8.27□□□□□ -1.09
EPHA4-212ENST00000472696 LTKP29376 864 aa8.27□□□□□ -1.09
EPHA4-212ENST00000472696 ALKQ9UM73 1620 aa8.27□□□□□ -1.09
EPHA4-212ENST00000472696 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
EPHA4-212ENST00000472696 CARD11Q9BXL7 1154 aa8.26□□□□□ -1.09
EPHA4-212ENST00000472696 ABCC11Q96J66 1382 aa8.25□□□□□ -1.09
EPHA4-212ENST00000472696 CFAP70Q5T0N1 1121 aa8.25□□□□□ -1.09
EPHA4-212ENST00000472696 NPHP4O75161 1426 aaPredicted RBP8.25□□□□□ -1.09
EPHA4-212ENST00000472696 ADAMTS13Q76LX8 1427 aa8.25□□□□□ -1.09
EPHA4-212ENST00000472696 ADGRB1O14514 1584 aa8.25□□□□□ -1.09
EPHA4-212ENST00000472696 SETD1AO15047 1707 aaKnown RBP8.25□□□□□ -1.09
EPHA4-212ENST00000472696 NRXN3Q9Y4C0 1643 aa8.25□□□□□ -1.09
EPHA4-212ENST00000472696 IQGAP1P46940 1657 aa8.24□□□□□ -1.09
EPHA4-212ENST00000472696 DLC1Q96QB1 1528 aa8.24□□□□□ -1.09
EPHA4-212ENST00000472696 SBNO2Q9Y2G9 1366 aa8.24□□□□□ -1.09
EPHA4-212ENST00000472696 TECPR2O15040 1411 aa8.24□□□□□ -1.09
EPHA4-212ENST00000472696 LRPPRCP42704 1394 aaKnown RBP8.23□□□□□ -1.09
EPHA4-212ENST00000472696 KNDC1Q76NI1 1749 aa8.23□□□□□ -1.09
EPHA4-212ENST00000472696 FAM135BQ49AJ0 1406 aa8.23□□□□□ -1.09
EPHA4-212ENST00000472696 YTHDC2Q9H6S0 1430 aaKnown RBP8.22□□□□□ -1.09
EPHA4-212ENST00000472696 NBPF1Q3BBV0 1214 aa8.22□□□□□ -1.09
EPHA4-212ENST00000472696 NUTM2DQ5VT03 806 aaPredicted RBP8.22□□□□□ -1.09
EPHA4-212ENST00000472696 PUS7Q96PZ0 661 aaKnown RBP8.22□□□□□ -1.09
EPHA4-212ENST00000472696 USP47Q96K76 1375 aa8.22□□□□□ -1.09
EPHA4-212ENST00000472696 PTCH1Q13635 1447 aa8.21□□□□□ -1.09
EPHA4-212ENST00000472696 NCOA3Q9Y6Q9 1424 aa8.21□□□□□ -1.09
EPHA4-212ENST00000472696 STRCQ7RTU9 1775 aa8.21□□□□□ -1.1
EPHA4-212ENST00000472696 CDCA8Q53HL2 280 aa8.21□□□□□ -1.1
EPHA4-212ENST00000472696 CHD2O14647 1828 aaKnown RBP8.21□□□□□ -1.1
EPHA4-212ENST00000472696 CPS1P31327 1500 aa8.2□□□□□ -1.1
EPHA4-212ENST00000472696 KCNA6P17658 529 aa8.2□□□□□ -1.1
EPHA4-212ENST00000472696 NCKAP5LQ9HCH0 1330 aa8.2□□□□□ -1.1
EPHA4-212ENST00000472696 METP08581 1390 aa8.2□□□□□ -1.1
EPHA4-212ENST00000472696 ASXL1Q8IXJ9 1541 aa8.19□□□□□ -1.1
EPHA4-212ENST00000472696 NWD1Q149M9 1564 aa8.19□□□□□ -1.1
EPHA4-212ENST00000472696 TMF1P82094 1093 aa8.19□□□□□ -1.1
EPHA4-212ENST00000472696 MYT1Q01538 1121 aa8.19□□□□□ -1.1
EPHA4-212ENST00000472696 SLC26A8Q96RN1 970 aa8.19□□□□□ -1.1
EPHA4-212ENST00000472696 CENPJQ9HC77 1338 aaPredicted RBP8.19□□□□□ -1.1
EPHA4-212ENST00000472696 NKTRP30414 1462 aaKnown RBP8.19□□□□□ -1.1
EPHA4-212ENST00000472696 XRN1Q8IZH2 1706 aaKnown RBP8.18□□□□□ -1.1
EPHA4-212ENST00000472696 ARHGEF28Q8N1W1 1705 aaKnown RBP8.18□□□□□ -1.1
EPHA4-212ENST00000472696 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
EPHA4-212ENST00000472696 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
EPHA4-212ENST00000472696 TULP1O00294 542 aaPredicted RBP8.18□□□□□ -1.1
EPHA4-212ENST00000472696 HSPA5P11021 654 aaKnown RBP8.18□□□□□ -1.1
EPHA4-212ENST00000472696 HSPA2P54652 639 aa8.18□□□□□ -1.1
EPHA4-212ENST00000472696 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms