RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
SIK3-208ENST00000472648 ARHGEF5Q12774 1597 aa9.63□□□□□ -0.87
SIK3-208ENST00000472648 EHBP1L1Q8N3D4 1523 aa9.63□□□□□ -0.87
SIK3-208ENST00000472648 TMEM2Q9UHN6 1383 aa9.63□□□□□ -0.87
SIK3-208ENST00000472648 RBM6P78332 1123 aaKnown RBP9.61□□□□□ -0.87
SIK3-208ENST00000472648 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
SIK3-208ENST00000472648 MAST1Q9Y2H9 1570 aa9.61□□□□□ -0.87
SIK3-208ENST00000472648 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
SIK3-208ENST00000472648 GCC2Q8IWJ2 1684 aa9.59□□□□□ -0.87
SIK3-208ENST00000472648 ADGRB3O60242 1522 aa9.59□□□□□ -0.87
SIK3-208ENST00000472648 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
SIK3-208ENST00000472648 NGLY1Q96IV0 654 aa9.58□□□□□ -0.88
SIK3-208ENST00000472648 C8orf37Q96NL8 207 aa9.58□□□□□ -0.88
SIK3-208ENST00000472648 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
SIK3-208ENST00000472648 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
SIK3-208ENST00000472648 ARHGAP31Q2M1Z3 1444 aa9.57□□□□□ -0.88
SIK3-208ENST00000472648 RSPH4AQ5TD94 716 aa9.57□□□□□ -0.88
SIK3-208ENST00000472648 BCANQ96GW7 911 aa9.57□□□□□ -0.88
SIK3-208ENST00000472648 TSPY4P0CV99 314 aa9.56□□□□□ -0.88
SIK3-208ENST00000472648 TSPY10P0CW01 314 aa9.56□□□□□ -0.88
SIK3-208ENST00000472648 ASXL1Q8IXJ9 1541 aa9.56□□□□□ -0.88
SIK3-208ENST00000472648 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
SIK3-208ENST00000472648 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
SIK3-208ENST00000472648 CROCC2H7BZ55 1655 aa9.55□□□□□ -0.88
SIK3-208ENST00000472648 BRWD3Q6RI45 1802 aa9.55□□□□□ -0.88
SIK3-208ENST00000472648 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
SIK3-208ENST00000472648 DUOX2Q9NRD8 1548 aa9.55□□□□□ -0.88
SIK3-208ENST00000472648 ATF3P18847 181 aa9.54□□□□□ -0.88
SIK3-208ENST00000472648 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
SIK3-208ENST00000472648 SETD5Q9C0A6 1442 aa9.54□□□□□ -0.88
SIK3-208ENST00000472648 SPHKAPQ2M3C7 1700 aa9.52□□□□□ -0.89
SIK3-208ENST00000472648 NALCNQ8IZF0 1738 aa9.52□□□□□ -0.89
SIK3-208ENST00000472648 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.51□□□□□ -0.89
SIK3-208ENST00000472648 BRINP3Q76B58 766 aa9.5□□□□□ -0.89
SIK3-208ENST00000472648 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
SIK3-208ENST00000472648 PNPLA6Q8IY17 1366 aa9.5□□□□□ -0.89
SIK3-208ENST00000472648 PLEKHG1Q9ULL1 1385 aa9.5□□□□□ -0.89
SIK3-208ENST00000472648 IDI1Q13907 227 aa9.49□□□□□ -0.89
SIK3-208ENST00000472648 LRRC59Q96AG4 307 aaKnown RBP9.49□□□□□ -0.89
SIK3-208ENST00000472648 TRPC5Q9UL62 973 aaPredicted RBP9.49□□□□□ -0.89
SIK3-208ENST00000472648 UNC13BO14795 1591 aa9.49□□□□□ -0.89
SIK3-208ENST00000472648 TMEM131LA2VDJ0 1609 aa9.49□□□□□ -0.89
SIK3-208ENST00000472648 KANK1Q14678 1352 aa9.49□□□□□ -0.89
SIK3-208ENST00000472648 DCCP43146 1447 aa9.48□□□□□ -0.89
SIK3-208ENST00000472648 TRPM2O94759 1503 aa9.48□□□□□ -0.89
SIK3-208ENST00000472648 PPP1R15AO75807 674 aaPredicted RBP9.48□□□□□ -0.89
SIK3-208ENST00000472648 ADAMTS2O95450 1211 aa9.48□□□□□ -0.89
SIK3-208ENST00000472648 USP21Q9UK80 565 aa9.48□□□□□ -0.89
SIK3-208ENST00000472648 LAMC1P11047 1609 aa9.48□□□□□ -0.89
SIK3-208ENST00000472648 COL22A1Q8NFW1 1626 aaPredicted RBP9.48□□□□□ -0.89
SIK3-208ENST00000472648 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
SIK3-208ENST00000472648 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
SIK3-208ENST00000472648 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
SIK3-208ENST00000472648 ERBINQ96RT1 1412 aa9.48□□□□□ -0.89
SIK3-208ENST00000472648 ATRNO75882 1429 aa9.47□□□□□ -0.89
SIK3-208ENST00000472648 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.89
SIK3-208ENST00000472648 MST1RQ04912 1400 aa9.46□□□□□ -0.9
SIK3-208ENST00000472648 RIMS2Q9UQ26 1411 aa9.46□□□□□ -0.9
SIK3-208ENST00000472648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.45□□□□□ -0.95e-7■■□□□ 12.5
SIK3-208ENST00000472648 NOS1P29475 1434 aa9.45□□□□□ -0.9
SIK3-208ENST00000472648 PTCH1Q13635 1447 aa9.45□□□□□ -0.9
SIK3-208ENST00000472648 YY1P25490 414 aa9.44□□□□□ -0.9
SIK3-208ENST00000472648 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
SIK3-208ENST00000472648 SF3B2Q13435 895 aaKnown RBP9.44□□□□□ -0.9
SIK3-208ENST00000472648 TBX22Q9Y458 520 aa9.44□□□□□ -0.9
SIK3-208ENST00000472648 PIK3R4Q99570 1358 aa9.44□□□□□ -0.9
SIK3-208ENST00000472648 KIF15Q9NS87 1388 aa9.44□□□□□ -0.9
SIK3-208ENST00000472648 RGPD1P0DJD0 1748 aa9.44□□□□□ -0.9
SIK3-208ENST00000472648 PTPN23Q9H3S7 1636 aa9.42□□□□□ -0.9
SIK3-208ENST00000472648 ADAMTS13Q76LX8 1427 aa9.42□□□□□ -0.9
SIK3-208ENST00000472648 DEFB132Q7Z7B7 95 aa9.42□□□□□ -0.9
SIK3-208ENST00000472648 SLC52A1Q9NWF4 448 aa9.42□□□□□ -0.9
SIK3-208ENST00000472648 GLI3P10071 1580 aa9.41□□□□□ -0.9
SIK3-208ENST00000472648 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
SIK3-208ENST00000472648 FNBP4Q8N3X1 1017 aaPredicted RBP9.41□□□□□ -0.9
SIK3-208ENST00000472648 DDX17Q92841 729 aaKnown RBP9.41□□□□□ -0.9
SIK3-208ENST00000472648 RPRD2Q5VT52 1461 aaKnown RBP9.4□□□□□ -0.9
SIK3-208ENST00000472648 BCL9LQ86UU0 1499 aa9.4□□□□□ -0.9
SIK3-208ENST00000472648 HRCP23327 699 aa9.4□□□□□ -0.9
SIK3-208ENST00000472648 IFFO2Q5TF58 517 aa9.4□□□□□ -0.9
SIK3-208ENST00000472648 MYOM3Q5VTT5 1437 aa9.39□□□□□ -0.91
SIK3-208ENST00000472648 NRXN3Q9Y4C0 1643 aa9.39□□□□□ -0.91
SIK3-208ENST00000472648 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.91
SIK3-208ENST00000472648 AMOTL2Q9Y2J4 779 aa9.39□□□□□ -0.91
SIK3-208ENST00000472648 PLCH1Q4KWH8 1693 aa9.39□□□□□ -0.91
SIK3-208ENST00000472648 IQGAP3Q86VI3 1631 aa9.38□□□□□ -0.91
SIK3-208ENST00000472648 CHD4Q14839 1912 aa9.38□□□□□ -0.91
SIK3-208ENST00000472648 PTPRUQ92729 1446 aa9.38□□□□□ -0.91
SIK3-208ENST00000472648 ADGRL3Q9HAR2 1447 aa9.38□□□□□ -0.91
SIK3-208ENST00000472648 TNS1Q9HBL0 1735 aaKnown RBP9.37□□□□□ -0.91
SIK3-208ENST00000472648 NWD2Q9ULI1 1742 aa9.37□□□□□ -0.91
SIK3-208ENST00000472648 GJD4Q96KN9 370 aaPredicted RBP9.37□□□□□ -0.91
SIK3-208ENST00000472648 RRP7BPQ9NSQ0 103 aa9.37□□□□□ -0.91
SIK3-208ENST00000472648 E9PCH4 1651 aa9.36□□□□□ -0.91
SIK3-208ENST00000472648 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
SIK3-208ENST00000472648 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
SIK3-208ENST00000472648 MYOM2P54296 1465 aa9.35□□□□□ -0.91
SIK3-208ENST00000472648 BAG6P46379 1132 aa9.35□□□□□ -0.91
SIK3-208ENST00000472648 CAMTA1Q9Y6Y1 1673 aa9.35□□□□□ -0.91
SIK3-208ENST00000472648 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms